Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	STX5	Gene	0	87.24	53.49	106.74	108.86	65.79	87.10	55.62	150.16	128.60	146.15	130.86	59.77	77.40	136.15	210.79	186.17	180.73	94.25	84.35	55.38	200.35	150.66	144.86
2	294179	Transcript	1	4.12	8.40	0.03	3.08	4.08	23.12	9.65	4.69	14.79	10.96	5.95	1.48	66.03	10.17	31.68	42.55	17.46	10.21	42.16	10.02	18.67	15.41	83.93
3	486437	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	488303	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	491231	Transcript	0	2.12	1.99	3.98	2.23	5.23	7.00	2.10	5.37	3.44	6.10	0.00	0.00	0.21	0.81	2.37	0.14	4.20	7.65	0.58	5.02	6.11	1.23	3.74
6	394690	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	377897	Transcript	0	3.56	1.09	6.25	10.05	15.81	11.67	4.58	8.37	9.95	10.14	3.05	2.33	4.03	4.31	7.85	3.54	5.33	2.75	1.47	3.87	5.03	8.21	6.48
8	492066	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	431400	Transcript	0	24.70	7.88	25.93	21.21	12.31	7.78	13.16	26.82	15.96	16.63	15.74	14.13	16.76	30.32	40.19	42.96	28.29	37.74	15.17	18.16	21.96	9.87	42.33
10	ER1a	ExonRegion	1	4.12	8.40	0.03	3.08	4.08	23.12	9.65	4.69	14.79	10.96	5.95	1.48	66.03	10.17	31.68	42.55	17.46	10.21	42.16	10.02	18.67	15.41	83.93
11	E1_Ab	KnownBoundary	1	7.56	13.29	0.00	7.62	8.66	42.25	24.60	7.11	13.37	9.24	10.53	0.00	80.68	14.83	46.36	92.11	28.61	94.18	76.43	19.37	24.83	21.68	176.62
12	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	4.00	0.00	0.00	0.00	2.46	3.47	6.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	4.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.49	0.00	0.00	0.00	0.00	0.00
14	E1_Ae	KnownBoundary	0	20.89	2.57	25.25	11.92	31.15	51.28	31.58	14.79	29.54	33.34	27.80	18.16	34.09	22.66	482.23	219.77	129.59	29.72	86.03	2.75	93.47	100.12	248.24
15	ER1b	ExonRegion	1	8.47	12.20	2.04	4.09	18.14	47.27	18.54	6.91	23.74	17.46	10.09	8.66	71.39	19.67	62.22	79.59	35.21	17.04	63.71	15.37	45.05	37.97	136.06
16	ER1c	ExonRegion	1	10.58	12.20	4.90	4.09	24.08	49.51	23.83	6.91	24.70	19.50	19.33	17.32	51.59	25.99	145.06	163.47	82.52	24.02	92.38	17.02	68.31	62.51	223.18
17	ER1d	ExonRegion	1	20.95	13.62	4.90	5.18	27.56	70.60	34.03	6.91	24.70	19.84	43.10	21.21	46.43	33.78	363.82	203.89	133.03	29.75	107.98	17.23	117.02	112.72	271.64
18	ER1e	ExonRegion	1	19.43	4.28	5.06	6.14	13.31	45.75	20.08	5.21	13.78	14.67	50.78	13.33	26.74	24.02	193.37	136.02	109.14	15.86	55.02	3.62	108.47	91.86	144.96
19	E1a_E2a	KnownJunction	0	0.00	5.92	7.57	12.35	0.00	0.00	3.53	8.38	13.57	18.32	25.85	6.30	13.15	0.00	9.77	15.89	25.34	11.03	4.80	2.68	45.22	3.12	28.94
20	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.67	0.00	0.00	1.33	1.26	0.00	0.00	0.00	2.47	4.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER2a	ExonRegion	0	9.39	13.56	53.36	42.12	4.55	19.39	10.57	62.82	92.16	110.10	109.06	29.99	64.04	75.79	203.45	273.11	180.58	67.97	100.00	41.19	202.65	120.72	284.95
22	E2_Ab	KnownBoundary	1	17.11	35.91	53.84	52.54	15.79	63.03	4.33	76.11	69.27	76.91	52.64	43.36	81.49	98.95	232.52	473.21	90.70	147.70	262.69	46.21	108.23	124.43	400.35
23	ER2b	ExonRegion	0	40.07	46.68	79.60	71.75	46.49	87.38	42.16	100.74	88.68	111.29	96.33	25.83	69.47	122.29	166.36	160.40	141.54	78.38	90.28	68.20	170.68	87.21	122.05
24	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.31	2.45	0.00
25	E2a_E4a	KnownJunction	0	26.82	92.15	121.96	123.63	79.20	252.87	132.49	145.61	133.88	154.40	122.61	39.61	60.71	159.10	168.37	180.04	209.54	98.70	84.61	85.07	198.31	121.55	133.59
26	E2a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER3a	ExonRegion	0	5.14	3.01	9.22	1.91	4.19	4.02	5.00	5.55	4.93	1.14	1.52	6.64	8.34	3.09	5.36	7.37	8.10	1.48	2.01	2.00	9.03	5.51	11.87
28	E3a_E4a	KnownJunction	0	3.19	2.70	4.26	0.00	0.00	0.00	0.00	1.56	8.33	2.63	2.58	0.00	0.00	0.00	4.45	0.00	0.00	0.00	0.00	0.00	10.56	2.39	0.00
29	E4_Aa	NovelBoundary	0	7.26	6.18	9.17	2.06	8.57	8.52	30.60	24.48	16.32	6.02	2.47	24.31	19.80	2.12	4.45	14.44	11.22	8.58	4.80	9.14	14.83	9.19	40.55
30	ER4a	ExonRegion	0	48.41	67.33	122.18	118.65	53.81	188.48	122.60	143.15	143.77	165.80	157.37	104.46	112.65	167.23	191.48	227.77	262.21	104.01	75.23	84.76	272.90	161.23	144.70
31	E4_Da	NovelBoundary	0	29.49	63.34	104.61	97.26	22.24	95.29	70.04	109.59	119.39	125.07	95.02	70.97	83.92	80.35	118.43	118.69	175.32	80.50	19.01	67.18	166.55	93.93	87.07
32	E4b_E5a	KnownJunction	0	97.42	89.59	144.94	144.07	68.25	96.42	59.93	189.31	155.67	184.38	226.00	75.47	101.94	169.52	285.06	229.60	258.91	91.69	61.37	91.15	281.77	140.47	135.13
33	ER4b	ExonRegion	0	62.30	77.78	141.76	139.18	46.16	120.46	67.94	167.66	156.09	178.13	202.47	88.48	111.39	147.19	232.83	214.55	277.07	107.52	52.36	88.03	277.12	144.28	130.50
34	ER5a	ExonRegion	0	86.25	83.74	161.99	169.48	63.12	101.94	55.89	192.72	180.55	187.52	217.42	86.82	115.07	200.32	242.36	223.23	292.19	106.58	102.22	83.78	297.30	166.79	126.59
35	E5a_E6a	KnownJunction	0	107.65	75.25	182.99	203.14	74.36	126.18	57.63	221.72	218.37	202.73	245.11	134.29	136.84	284.01	301.75	210.97	354.18	123.45	129.04	119.97	375.85	192.64	141.53
36	ER6a	ExonRegion	0	88.24	68.83	180.47	170.82	72.77	140.32	90.40	236.99	217.36	238.90	239.49	122.14	120.49	272.21	279.66	293.95	351.52	170.49	120.73	122.83	363.77	234.79	201.80
37	E6a_E7a	KnownJunction	0	113.50	71.37	161.23	174.37	134.30	135.43	133.90	261.68	206.57	233.19	246.27	132.49	103.73	215.79	323.26	334.53	292.85	154.95	135.06	134.48	337.24	298.51	237.39
38	E7_Ab	NovelBoundary	0	97.80	55.58	60.29	75.02	93.04	141.17	109.21	124.41	93.46	94.12	134.88	60.17	31.49	117.84	189.88	197.38	217.86	73.21	50.64	56.82	186.94	188.72	113.96
39	ER7a	ExonRegion	0	89.65	63.48	152.47	164.71	115.06	148.01	119.91	244.45	200.44	234.05	231.12	125.25	87.77	214.04	319.55	309.74	308.16	161.15	116.49	112.31	335.12	284.25	220.46
40	ER7b	ExonRegion	0	119.34	64.50	143.37	192.31	138.45	157.61	122.11	232.01	193.72	225.70	205.09	181.95	112.20	222.34	298.68	271.76	332.29	145.36	88.54	75.45	313.04	253.33	183.28
41	E7_Da	KnownBoundary	0	163.73	75.97	154.99	222.68	162.90	127.26	141.28	208.37	185.44	216.37	189.05	193.56	142.69	234.21	286.42	253.01	347.36	148.94	99.30	62.00	334.77	221.42	179.95
42	ER7c	ExonRegion	0	104.24	72.67	148.75	164.08	90.14	121.75	96.42	200.07	207.09	206.68	173.75	139.29	156.24	209.71	234.50	236.01	330.81	155.59	109.90	69.35	278.32	214.86	169.45
43	E7b_E8a	KnownJunction	0	92.83	104.46	149.64	120.40	137.35	121.98	103.83	192.23	200.17	184.25	186.47	159.35	174.34	264.29	242.41	224.64	272.00	115.82	172.15	98.30	321.92	210.40	189.59
44	ER8a	ExonRegion	0	98.36	78.31	126.41	124.09	120.03	119.78	91.31	198.04	183.12	176.44	194.99	130.19	151.07	254.82	296.13	273.59	285.79	124.93	112.49	65.96	339.41	235.95	188.98
45	E8_Da	NovelBoundary	0	60.53	9.74	30.04	19.05	11.71	24.59	18.72	31.91	11.98	16.60	0.00	0.00	20.62	7.36	4.45	6.75	9.44	11.28	9.22	10.10	20.63	2.33	35.25
46	E8a_E9a	KnownJunction	0	158.40	88.60	124.80	150.53	127.16	159.40	84.57	224.68	175.06	201.73	198.26	118.09	109.08	266.35	336.98	304.11	269.00	140.15	101.74	82.52	318.83	297.90	177.13
47	I8	Intron	0	28.78	3.14	8.47	9.42	14.92	22.67	18.01	9.55	7.96	6.34	2.99	12.80	5.03	4.67	8.23	7.35	9.18	9.09	4.92	5.26	11.58	6.44	16.34
48	I8_AR1	ActiveIntronRegion	0	29.14	3.18	8.57	9.52	15.10	22.94	18.23	9.66	8.06	6.42	3.02	12.96	5.06	4.72	8.33	7.44	9.30	9.20	4.98	5.33	11.72	6.52	16.52
49	ER9a	ExonRegion	0	111.79	88.98	122.21	119.58	100.05	140.20	70.93	192.91	163.29	196.78	185.20	97.20	93.86	230.98	289.17	278.58	265.40	143.38	88.37	82.67	288.23	258.99	177.45
50	E9_Da	NovelBoundary	0	31.78	6.71	15.52	21.51	27.33	32.37	12.45	14.54	17.77	8.19	0.00	0.00	0.00	2.35	10.63	11.62	12.44	11.03	4.80	7.67	11.37	5.63	8.19
51	E9a_E10a	KnownJunction	0	96.54	79.92	111.91	101.49	48.47	124.53	72.07	184.18	124.48	194.70	118.08	80.28	114.28	174.05	242.54	188.84	188.03	125.15	116.62	64.94	232.96	169.74	113.19
52	E9b_E10a	KnownJunction	0	0.00	2.50	1.83	1.86	0.00	2.16	1.68	3.98	3.18	5.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.89	0.00	3.07	5.00	0.00	4.01
53	ER9b	ExonRegion	0	4.23	1.48	6.13	2.60	10.46	11.84	2.53	6.76	3.71	7.19	0.00	0.00	0.43	1.62	4.75	0.27	8.40	10.41	1.16	6.96	7.21	2.46	3.47
54	I9	Intron	0	20.01	13.86	11.64	24.11	10.59	13.30	13.68	25.48	17.40	23.29	2.55	4.09	5.94	7.41	18.46	28.75	9.43	7.68	10.50	7.48	11.14	12.37	20.01
55	I9_AR1	ActiveIntronRegion	0	20.55	14.35	12.00	24.93	10.94	13.78	14.13	26.29	17.98	24.12	2.64	4.23	6.09	7.61	19.12	29.73	9.68	7.87	10.88	7.75	11.54	12.76	20.70
56	E10_Aa	NovelBoundary	0	49.79	19.93	27.79	39.09	11.80	27.43	21.51	37.01	17.59	28.15	2.21	0.00	11.69	4.71	22.13	15.98	8.04	9.58	8.94	11.06	19.89	8.51	27.32
57	ER10a	ExonRegion	0	190.09	113.14	147.88	132.81	137.51	140.16	110.72	203.84	171.47	197.48	190.26	57.78	96.78	214.57	324.05	248.19	260.40	152.64	120.78	79.56	294.72	215.71	165.03
58	E10a_E11a	KnownJunction	0	457.41	192.79	205.91	188.82	180.82	179.16	158.81	288.42	208.62	254.79	233.06	77.13	78.08	256.70	420.79	336.07	224.87	167.93	115.11	108.34	352.25	264.59	215.20
59	ER11a	ExonRegion	0	240.43	148.72	214.17	208.95	182.96	212.98	146.29	289.29	230.35	250.31	245.48	83.50	136.63	252.78	397.19	310.56	283.17	191.41	132.90	111.37	337.58	263.19	228.67
60	E11_Da	KnownBoundary	1	26.23	2.70	26.55	28.47	28.27	10.51	23.32	33.27	19.76	28.04	22.85	12.00	13.15	27.96	84.68	73.48	8.60	43.28	8.09	26.59	21.75	16.90	60.95
61	E11a_E12a	KnownJunction	0	3.26	0.00	3.10	4.13	16.04	5.79	0.00	3.98	3.24	4.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.57	0.00
62	E11a_E12b	KnownJunction	0	158.47	98.73	197.04	194.55	202.80	257.47	159.78	314.55	238.25	260.08	238.22	136.09	184.08	239.80	391.99	261.13	347.08	178.62	114.26	125.53	333.66	265.69	242.77
63	ER11b	ExonRegion	0	24.70	7.88	25.93	21.21	12.31	7.78	13.16	26.82	15.96	16.63	15.74	14.13	16.76	30.32	40.19	42.96	28.29	37.74	15.17	18.16	21.96	9.87	42.33
64	E11_Db	NovelBoundary	1	33.34	6.45	38.14	34.63	3.48	2.33	15.63	21.81	32.15	18.40	7.74	5.85	62.01	26.13	53.16	45.37	20.76	30.51	23.06	16.75	29.90	10.04	50.45
65	I11	Intron	0	21.01	5.90	7.10	12.38	14.29	6.92	10.61	12.94	10.63	9.53	1.91	7.84	12.37	2.71	9.66	8.45	6.80	5.71	5.36	7.41	4.41	6.41	12.96
66	I11_SR1	SilentIntronRegion	0	20.42	6.12	6.46	12.28	14.00	7.12	10.95	13.32	10.67	9.80	2.06	7.67	12.87	2.88	10.07	8.75	7.24	6.16	5.49	7.27	4.76	6.59	13.52
67	I11_AR1	ActiveIntronRegion	0	28.64	3.24	15.27	13.76	18.12	4.38	6.33	8.21	10.27	6.13	0.00	9.94	6.16	0.53	4.56	4.74	1.32	0.00	3.81	9.33	0.00	4.15	5.83
68	ER12a	ExonRegion	0	3.85	2.19	9.39	15.97	15.57	17.54	9.17	12.76	16.66	15.82	6.10	4.66	8.06	8.62	15.70	7.09	10.66	5.50	2.94	7.75	10.06	10.84	12.95
69	E12_Ab	KnownBoundary	0	2.82	0.00	6.62	14.32	8.66	16.98	10.11	11.13	17.36	16.71	0.00	6.30	0.00	6.53	21.14	0.00	8.32	3.48	0.00	9.78	0.00	5.20	17.07
70	ER12b	ExonRegion	0	128.97	65.77	156.92	169.33	84.81	104.18	59.93	234.13	186.84	220.15	171.71	73.92	93.16	170.57	275.21	219.89	211.91	115.71	114.87	64.00	250.33	209.19	166.33
71	E12_Da	KnownBoundary	0	23.78	3.22	31.02	25.30	6.71	4.77	1.63	34.95	40.28	38.55	9.48	6.00	0.00	4.47	28.06	26.40	16.36	19.15	30.21	8.37	8.34	14.02	22.96
72	E12_Db	KnownBoundary	0	66.97	41.51	5.38	11.65	51.44	51.33	44.60	29.53	22.42	18.78	64.54	6.00	12.66	7.06	53.90	69.81	76.20	3.32	37.93	28.57	70.55	39.43	55.14
73	ER12c	ExonRegion	1	57.15	26.44	40.44	49.06	53.51	49.51	30.45	65.68	65.46	50.46	67.65	17.32	23.45	37.35	118.95	74.30	69.32	38.80	63.71	31.91	68.31	52.09	82.23
74	ER12d	ExonRegion	1	55.80	26.44	38.65	49.06	48.41	46.01	29.73	60.02	61.98	44.94	65.37	16.14	23.45	33.52	160.62	74.30	68.42	38.63	57.34	31.91	67.71	47.54	77.42
75	ER12e	ExonRegion	1	37.72	20.34	14.75	31.74	34.31	29.86	23.41	37.16	27.75	22.69	46.60	9.59	14.24	21.23	101.13	51.59	47.63	24.09	27.64	20.06	48.88	29.24	47.83
76	IG12	Intergenic	0	2.32	4.68	8.13	6.13	12.73	11.42	6.70	26.16	49.96	21.74	5.03	3.45	1.17	4.19	4.28	3.59	5.86	8.67	9.14	7.71	11.39	11.33	14.41
77	IG12_AR9	ActiveIntergenicRegion	0	0.12	1.02	1.77	1.76	8.81	4.42	2.02	2.08	14.42	5.36	2.16	0.00	0.00	1.43	2.82	0.79	0.00	4.08	0.66	1.06	3.76	4.35	0.60
78	IG12_SR1	SilentIntergenicRegion	0	3.30	5.37	11.11	7.95	15.52	15.54	9.27	38.82	73.36	30.66	6.13	3.48	2.81	4.31	7.15	3.61	5.22	19.56	10.14	12.54	15.92	15.46	20.93
79	IG12_AR8	ActiveIntergenicRegion	0	3.41	11.31	16.07	8.09	19.53	15.33	9.39	47.36	85.29	33.31	4.42	3.89	2.21	6.93	6.94	4.89	18.92	12.74	13.73	12.16	15.66	22.22	22.27
80	IG12_AR7	ActiveIntergenicRegion	0	2.12	15.98	16.10	7.98	18.73	18.73	14.66	37.04	75.69	34.08	1.93	7.73	0.00	4.52	1.04	4.46	9.20	11.88	28.67	14.29	20.15	22.47	16.99
81	IG12_AR6	ActiveIntergenicRegion	0	2.54	5.30	10.24	10.91	13.80	12.38	6.83	19.78	40.36	16.31	5.37	6.27	1.08	4.21	2.91	3.35	4.41	3.22	10.19	5.22	15.49	10.14	12.70
82	IG12_AR5	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.18	0.00	0.00	0.00	0.00	4.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.33	0.00
83	IG12_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.54	0.00	2.68	7.34	1.65	2.05	15.05	4.52	1.33	9.74	0.00	1.62	0.00	0.00	1.65	2.66	1.99	2.13	1.24	4.69	5.87
84	IG12_AR2	ActiveIntergenicRegion	0	0.00	0.00	3.99	0.00	3.67	6.25	2.87	10.82	37.14	17.22	7.87	7.94	0.00	5.93	2.58	0.77	5.68	3.49	2.36	4.89	8.49	7.76	3.86
85	IG12_AR1	ActiveIntergenicRegion	0	1.68	1.62	1.90	1.35	9.22	7.77	4.75	19.30	32.96	18.08	4.43	0.00	0.00	2.91	3.17	4.14	2.43	5.68	7.17	5.66	3.90	5.85	11.26