Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PLCB3 Gene 0 27.78 17.12 128.87 68.82 36.72 123.47 27.51 166.21 134.89 207.64 44.39 20.41 13.11 68.22 55.20 44.99 35.16 78.32 108.29 57.48 138.27 73.44 80.32 2 279230 Transcript 0 6.18 8.07 59.46 26.07 14.09 63.86 12.51 98.90 65.99 143.14 32.21 9.35 4.23 56.16 22.35 43.01 23.65 65.95 74.67 47.10 103.20 50.84 51.16 3 325234 Transcript 0 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 1.07 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.24 4 IG5_AR1 ActiveIntergenicRegion 0 1.18 4.45 10.02 9.07 5.48 16.45 5.30 14.62 13.02 16.99 15.79 1.56 0.36 9.36 7.58 9.40 3.38 11.45 15.32 17.62 17.22 10.67 10.93 5 IG5_AR5 ActiveIntergenicRegion 0 0.00 1.82 2.45 2.73 0.00 0.82 0.59 2.41 1.68 2.39 5.19 0.00 0.00 0.00 2.75 1.33 0.00 1.23 0.00 2.84 8.83 4.73 0.00 6 IG5_AR6 ActiveIntergenicRegion 0 0.00 0.00 1.89 1.14 0.00 3.42 0.00 1.34 0.00 1.71 2.35 0.00 0.00 0.00 0.00 0.06 0.00 2.39 0.00 3.06 9.94 2.17 2.94 7 ER1a ExonRegion 0 0.04 0.91 7.66 5.06 1.99 9.51 1.27 20.53 13.76 31.77 11.36 1.23 1.10 12.24 4.51 8.67 9.29 14.11 25.77 14.05 42.44 7.76 17.39 8 E1a_E2a KnownJunction 0 0.00 3.35 27.82 18.18 11.63 18.51 1.72 73.73 48.99 120.83 38.01 0.00 0.00 37.44 8.90 71.86 28.61 63.96 105.70 40.97 75.68 51.80 89.97 9 E1a_E4b KnownJunction 0 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 1.07 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.24 10 ER2a ExonRegion 0 3.99 5.16 45.46 15.64 10.53 40.53 6.67 71.64 49.85 101.31 22.20 2.94 1.86 44.25 24.44 58.26 23.15 69.50 76.33 39.80 87.84 44.23 79.18 11 E2a_E3a KnownJunction 0 13.19 12.50 58.78 15.22 4.33 67.40 5.56 102.44 50.06 91.33 32.69 0.00 6.82 28.43 14.83 36.57 19.54 59.36 44.71 43.66 55.11 21.62 23.13 12 ER3a ExonRegion 0 8.93 8.84 56.49 25.14 11.28 71.09 14.12 99.82 63.24 141.47 31.21 15.94 7.07 49.17 22.75 25.16 21.62 71.87 69.06 53.04 120.92 46.14 38.81 13 E3a_E4a KnownJunction 1 3.70 12.04 81.75 39.42 24.36 117.26 30.43 122.93 88.48 204.47 33.32 19.06 6.82 98.06 22.25 37.60 17.11 64.92 72.38 50.43 125.22 79.73 30.39 14 ER4a ExonRegion 0 7.27 6.54 86.42 42.79 22.38 68.35 16.56 122.85 95.33 199.42 35.81 18.18 2.81 79.61 40.93 28.59 31.87 66.08 79.87 54.70 154.42 61.52 45.49 15 E4_Ab KnownBoundary 0 11.19 5.85 121.23 51.44 19.02 70.98 13.69 139.65 132.46 222.39 40.27 19.66 0.00 65.98 42.15 46.74 29.08 75.40 98.45 58.16 139.12 68.46 58.82 16 ER4b ExonRegion 0 22.59 7.99 121.03 45.88 29.03 46.53 13.30 138.32 135.76 255.37 37.53 13.34 15.11 72.16 50.10 48.07 28.94 41.51 62.34 77.44 147.29 90.83 65.94 17 E4a_E5a KnownJunction 0 44.08 22.17 163.06 57.73 42.11 95.85 15.81 210.38 156.16 335.08 40.43 0.00 19.32 102.54 58.72 54.43 33.75 57.83 115.58 77.15 194.35 135.14 95.01 18 ER5a ExonRegion 0 25.90 19.55 135.25 59.97 54.59 160.43 32.04 198.73 173.21 303.30 46.10 21.70 10.55 111.17 60.42 70.03 48.94 107.89 162.97 81.60 208.77 131.11 98.56 19 E5a_E6a KnownJunction 0 42.23 29.99 106.62 65.33 80.90 212.21 25.26 207.67 161.60 321.22 81.76 28.96 8.28 100.83 50.56 56.40 85.09 94.35 124.90 88.84 253.90 64.85 128.13 20 ER6a ExonRegion 0 24.73 20.45 119.66 78.42 59.41 159.78 24.03 222.62 164.16 323.92 75.38 26.54 10.25 93.21 68.77 76.34 69.75 103.47 130.95 73.60 247.96 105.64 147.65 21 E6a_E7a KnownJunction 0 31.19 8.42 146.00 90.90 52.12 97.67 33.39 241.76 174.19 327.23 64.12 49.37 19.48 117.43 60.94 84.08 59.37 117.06 150.31 89.10 231.91 142.25 184.73 22 ER7a ExonRegion 0 22.95 21.14 167.42 100.55 52.21 115.60 27.51 275.07 226.45 352.49 68.57 52.64 51.47 146.19 83.68 91.47 75.27 152.68 215.85 93.53 235.65 177.78 187.98 23 E7a_E8a KnownJunction 0 20.45 37.10 188.34 118.57 54.07 119.02 19.43 298.73 250.84 419.64 76.86 80.58 19.48 122.26 103.84 99.63 105.28 137.67 219.39 94.60 261.87 197.29 197.87 24 ER8a ExonRegion 0 14.35 22.63 126.36 81.77 54.97 154.08 39.63 230.89 182.59 303.82 77.85 48.70 16.30 94.99 65.72 59.71 79.45 105.89 161.60 79.04 254.26 105.04 98.01 25 E8a_E9a KnownJunction 0 24.37 14.01 124.15 75.12 58.57 135.49 42.18 152.92 129.86 210.95 70.75 25.21 20.45 56.63 65.52 39.73 35.81 95.30 137.13 46.66 170.44 100.42 74.01 26 ER9a ExonRegion 0 39.02 23.65 135.88 61.49 53.76 188.22 35.68 147.73 139.35 230.19 49.63 42.72 31.43 92.55 67.15 60.53 47.71 114.42 145.53 73.27 204.47 113.25 126.70 27 E9a_E10a KnownJunction 0 28.60 30.65 120.37 74.05 40.92 202.89 60.64 157.19 170.86 267.60 66.60 50.57 26.62 64.22 75.53 48.53 57.69 118.64 149.37 92.74 235.62 74.52 87.67 28 ER10a ExonRegion 0 28.91 24.98 138.64 77.32 51.79 150.26 38.13 191.09 154.42 247.13 59.00 31.87 19.81 95.13 64.89 67.17 32.81 134.97 149.86 76.16 181.66 90.64 103.04 29 E10_Da NovelBoundary 0 3.19 2.83 11.09 1.66 0.00 9.09 0.00 8.30 3.01 0.00 2.21 0.00 0.00 0.00 0.00 20.76 0.00 2.57 0.00 0.00 0.00 0.00 0.00 30 E10a_E11a KnownJunction 0 14.37 14.08 79.71 73.75 31.49 156.78 42.40 164.13 143.08 225.91 71.97 6.30 34.90 117.78 77.38 46.83 40.11 122.12 141.09 78.11 150.74 76.36 55.74 31 ER11a ExonRegion 0 16.52 12.11 106.45 56.32 28.58 103.86 23.91 167.22 145.61 213.60 55.56 21.40 16.42 89.75 63.32 47.48 36.79 96.17 122.51 76.00 163.25 67.75 86.60 32 E11a_E12a KnownJunction 0 25.78 16.84 98.64 30.50 32.43 104.77 22.88 157.48 149.51 188.33 56.28 18.31 33.44 86.76 67.50 28.28 42.82 72.96 75.20 61.68 156.73 36.01 61.55 33 ER12a ExonRegion 0 19.00 8.16 88.59 25.81 15.99 89.92 22.29 107.73 121.38 149.03 38.16 10.03 17.66 58.11 55.57 27.38 24.15 50.56 87.54 50.06 120.84 62.85 59.49 34 E12a_E13a KnownJunction 1 60.16 18.75 100.41 46.95 27.76 210.56 54.19 166.84 134.26 196.44 60.07 0.00 13.15 45.50 45.37 52.81 27.40 85.10 177.98 46.79 157.29 76.48 88.86 35 ER13a ExonRegion 0 21.73 11.64 104.35 30.33 20.68 116.22 22.36 110.96 98.74 177.94 31.44 8.87 12.04 62.20 45.99 47.00 21.25 65.03 75.65 45.06 96.62 55.11 76.59 36 E13a_E14a KnownJunction 0 23.63 27.69 106.12 52.91 15.79 61.27 27.29 134.27 119.01 203.37 30.22 13.35 0.00 68.81 38.94 32.64 41.80 68.81 81.04 62.45 83.65 47.27 57.62 37 I13_AR2 ActiveIntronRegion 0 1.73 0.09 25.87 4.40 3.71 5.88 1.72 16.15 5.56 22.10 4.31 2.85 0.96 4.65 7.19 3.17 1.80 12.01 6.95 2.90 12.32 0.00 5.34 38 ER14a ExonRegion 0 33.32 22.52 136.89 63.20 42.34 149.22 40.36 176.05 146.95 250.59 51.46 16.29 13.20 82.59 53.55 48.75 50.27 80.65 112.83 60.71 155.81 78.72 95.90 39 E14a_E15a KnownJunction 0 34.75 30.06 150.70 110.74 30.48 169.96 38.55 263.41 207.78 274.31 59.33 31.06 19.64 78.40 41.29 50.59 28.05 124.73 213.37 92.49 139.99 141.82 111.48 40 ER15a ExonRegion 0 21.60 18.62 175.40 97.80 48.96 141.79 30.40 268.41 211.90 330.90 75.40 30.22 22.34 93.66 54.71 50.01 53.87 128.10 229.18 88.99 215.58 134.83 113.44 41 E15a_E16a KnownJunction 0 26.75 8.55 230.48 105.08 48.47 198.18 42.13 284.68 233.48 376.71 105.18 43.21 53.24 106.78 37.95 58.70 56.47 101.02 166.78 79.83 242.85 86.03 101.07 42 ER16a ExonRegion 0 32.74 26.32 201.80 108.71 58.77 151.92 42.97 263.05 214.05 339.75 72.02 47.17 26.54 88.83 72.39 66.30 38.17 123.67 152.52 92.92 212.13 110.65 124.65 43 E16a_E17a KnownJunction 0 52.16 36.84 214.48 131.78 58.40 179.67 38.24 285.63 235.41 346.20 76.39 58.22 26.62 113.43 99.14 90.15 57.60 149.36 135.44 90.19 210.17 144.76 152.97 44 ER17a ExonRegion 0 35.73 28.75 198.13 103.61 48.55 184.54 50.87 234.49 188.02 290.18 50.72 50.46 20.49 76.80 64.87 51.50 54.08 120.22 202.79 82.81 189.27 110.41 98.27 45 E17a_E18a KnownJunction 0 60.97 21.90 189.05 104.15 41.85 200.34 53.57 218.10 144.18 226.10 26.11 43.96 48.21 56.92 77.38 27.86 45.07 85.64 129.60 98.62 145.42 78.75 107.64 46 ER18a ExonRegion 0 31.07 20.97 174.79 68.42 41.34 138.39 37.30 193.03 156.16 218.96 50.12 43.07 23.63 64.08 66.39 55.90 40.89 82.66 112.74 71.64 157.52 93.62 80.62 47 E18a_E19a KnownJunction 0 55.34 19.60 212.29 67.49 63.67 152.98 40.01 234.08 178.56 250.08 65.75 23.56 21.59 79.70 54.52 50.67 44.23 107.90 125.18 61.10 169.33 73.05 93.90 48 ER19a ExonRegion 0 23.48 17.16 219.42 75.12 34.01 146.69 41.05 245.65 192.15 272.26 61.46 22.21 24.03 76.97 64.38 54.03 48.09 126.33 144.34 71.76 190.77 96.03 119.37 49 E19_Da NovelBoundary 0 0.00 3.35 75.19 26.50 0.00 10.33 5.39 38.03 22.14 31.83 0.00 0.00 0.00 0.00 4.45 0.00 4.77 16.83 18.17 5.50 20.08 5.63 0.00 50 E19a_E20a KnownJunction 0 16.97 9.14 220.87 67.46 27.93 162.58 58.38 288.75 219.44 281.06 61.96 25.21 6.82 64.75 65.64 73.06 41.89 103.18 146.73 97.41 187.80 96.20 133.17 51 I19 Intron 0 4.86 0.90 31.77 16.84 6.34 13.71 3.92 16.02 13.49 26.44 3.29 1.58 0.00 6.06 5.81 3.52 3.42 9.93 9.90 6.61 8.97 4.32 8.91 52 I19_SR1 SilentIntronRegion 0 5.53 0.47 33.12 17.66 6.88 14.09 3.90 17.32 14.65 28.35 3.38 1.91 0.00 6.52 5.20 4.17 3.01 10.48 10.58 6.93 9.57 4.70 10.47 53 E20_Aa NovelBoundary 0 3.78 3.35 33.23 45.75 0.00 23.45 4.33 20.33 7.96 39.30 4.69 0.00 0.00 4.59 14.83 0.00 8.60 7.75 8.47 5.94 14.09 5.57 12.55 54 ER20a ExonRegion 0 21.57 8.13 196.98 83.97 24.19 165.04 32.26 213.36 191.36 279.27 58.93 20.44 21.29 81.47 65.54 67.56 53.01 115.19 114.93 73.98 200.07 101.38 101.02 55 E20a_E21a KnownJunction 0 25.41 22.10 197.63 70.99 13.16 131.06 23.27 210.13 189.70 299.32 43.96 36.76 13.64 50.44 55.75 38.79 76.95 101.48 119.34 70.95 177.86 79.85 80.84 56 ER21a ExonRegion 0 20.78 8.79 213.11 90.53 25.97 95.76 22.71 245.75 180.79 302.18 52.72 22.18 15.19 74.23 70.57 52.76 43.29 92.90 152.17 71.91 168.22 95.17 108.88 57 E21a_E22a KnownJunction 0 29.26 9.34 211.02 119.90 33.11 139.01 42.57 263.57 170.63 280.60 86.92 23.71 19.80 113.90 70.09 29.48 46.66 87.01 149.46 48.26 213.94 107.22 86.22 58 ER22a ExonRegion 0 9.41 4.20 104.12 47.69 16.55 60.93 18.90 138.80 103.90 177.98 38.72 13.93 8.56 55.86 31.57 21.45 30.89 64.75 76.90 29.95 131.12 41.96 38.56 59 E22a_E23a KnownJunction 0 12.00 6.12 94.85 34.36 7.89 48.38 21.33 86.13 65.19 120.48 19.48 12.30 6.66 19.31 18.54 17.86 18.79 60.44 12.52 29.34 48.62 20.57 36.96 60 E23_Aa NovelBoundary 0 0.00 0.00 3.08 22.21 0.00 0.00 0.00 0.00 7.99 8.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 61 ER23a ExonRegion 0 18.22 11.13 68.40 27.63 14.89 97.95 17.58 88.05 48.79 120.78 26.29 14.06 6.58 29.12 28.15 21.06 18.86 41.00 60.36 22.64 81.79 38.07 28.64 62 E23a_E24a KnownJunction 0 24.89 12.63 66.62 29.40 14.35 87.22 5.83 55.86 26.01 63.74 16.53 0.00 0.00 15.30 18.54 8.72 16.55 8.54 28.71 24.67 70.92 5.33 29.79 63 ER24a ExonRegion 0 18.11 8.47 64.23 36.57 16.13 70.60 6.29 51.33 36.23 72.19 9.40 0.00 0.00 20.48 21.03 14.94 8.89 21.97 45.92 26.36 80.80 17.02 31.81 64 E24a_E25a KnownJunction 0 28.52 15.59 48.19 44.02 24.45 70.93 9.85 46.09 36.08 67.02 2.00 0.00 0.00 22.07 28.43 19.57 8.88 28.48 64.75 30.87 87.72 29.09 30.90 65 ER25a ExonRegion 0 19.64 10.32 106.68 53.95 19.30 98.36 18.96 94.00 78.26 140.50 31.66 7.99 3.06 45.42 39.38 22.44 18.28 48.58 66.71 39.50 90.03 24.03 32.26 66 E25a_E26a KnownJunction 0 9.93 5.92 121.55 77.55 35.14 88.19 14.79 101.66 102.95 166.73 26.90 6.30 0.00 48.44 63.04 33.24 25.25 46.97 80.38 32.79 67.89 55.78 44.82 67 E26_Aa NovelBoundary 0 24.15 0.00 33.32 17.81 7.47 56.73 1.81 21.77 20.80 16.84 8.58 12.15 0.00 7.30 4.45 0.00 8.70 13.43 4.33 5.94 17.54 0.00 4.35 68 ER26a ExonRegion 0 29.80 19.03 206.27 143.70 37.51 180.94 25.03 227.48 191.51 255.95 38.29 5.43 12.46 70.84 76.07 43.87 35.88 82.56 120.59 61.00 122.38 63.56 91.28 69 E26a_E27a KnownJunction 0 30.89 14.08 224.15 137.84 29.80 234.52 41.07 235.40 215.02 269.59 35.80 12.15 7.30 73.87 87.40 22.13 48.53 86.93 94.50 59.89 139.12 90.32 80.92 70 ER27a ExonRegion 0 36.34 22.13 235.99 172.47 64.25 244.87 42.07 274.44 260.72 297.79 52.34 22.60 2.25 82.32 83.53 70.91 46.17 85.02 107.39 70.24 148.42 82.64 94.77 71 E27a_E28a KnownJunction 0 112.02 48.35 346.00 258.14 109.08 339.69 65.67 382.69 351.01 425.01 39.12 57.92 6.82 109.54 89.99 88.27 52.17 114.12 203.02 95.30 182.68 125.22 172.95 72 ER28a ExonRegion 0 77.61 34.32 302.35 223.07 72.10 331.94 43.60 377.92 286.18 361.38 57.08 43.78 14.96 94.88 104.09 76.75 38.14 111.44 148.65 91.75 155.46 108.11 141.15 73 E28a_E29a KnownJunction 0 86.39 30.65 220.31 151.03 82.34 211.87 40.45 261.15 216.98 281.84 63.96 12.45 12.66 65.75 62.67 51.52 32.16 80.63 114.07 88.40 114.41 77.58 74.86 74 E28a_E30a NovelJunction 0 3.33 0.00 7.60 1.33 0.00 14.08 2.16 18.61 5.73 17.27 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 ER29a ExonRegion 0 81.85 31.94 173.56 117.56 55.50 199.19 38.55 190.85 185.93 222.02 52.92 16.35 9.22 67.51 78.83 38.07 34.66 79.36 89.79 83.49 115.81 77.31 71.14 76 E29_Da NovelBoundary 0 10.59 0.00 51.92 28.53 3.99 24.59 4.15 34.63 34.00 33.36 2.58 6.30 0.00 9.83 4.45 21.28 3.83 27.03 8.94 5.75 11.00 6.12 23.47 77 E29a_E30a KnownJunction 0 126.69 42.23 156.50 142.31 57.56 226.12 48.71 198.88 173.93 181.16 44.64 24.16 0.00 53.68 85.79 55.03 29.92 79.05 103.44 67.62 86.61 60.31 70.68 78 I29 Intron 0 7.84 3.01 30.32 17.16 5.95 16.04 4.12 22.15 15.55 17.48 3.73 2.64 0.57 5.48 3.90 4.85 1.96 8.99 13.70 9.46 9.80 2.16 5.66 79 I29_SR1 SilentIntronRegion 0 7.88 3.03 30.50 17.26 5.99 16.12 4.14 22.28 15.64 17.59 3.75 2.66 0.58 5.51 3.92 4.87 1.97 9.04 13.77 9.52 9.86 2.17 5.69 80 ER30a ExonRegion 0 56.27 28.73 158.02 114.15 54.62 137.01 32.29 171.79 114.85 163.43 32.08 22.05 2.26 56.64 64.99 45.78 27.96 52.46 45.36 44.14 90.50 57.57 62.07 81 E30a_E31a KnownJunction 1 75.49 29.73 152.18 110.18 134.97 216.92 73.62 184.71 162.64 166.49 48.43 30.61 0.00 37.44 71.95 52.64 12.72 66.74 58.17 46.60 124.54 43.05 67.78 82 ER31a ExonRegion 0 41.58 21.65 64.23 51.78 45.70 81.98 23.39 116.99 85.16 106.96 32.13 6.70 3.06 45.52 50.48 27.88 20.25 34.90 73.24 28.11 63.69 49.25 53.93