Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IL18BP Gene 0 49.96 9.04 31.66 30.97 26.27 36.20 31.14 40.54 46.84 37.65 37.61 17.41 26.52 101.99 39.96 42.67 48.65 39.18 25.65 28.70 24.01 16.14 22.67 2 393703 Transcript 0 14.72 9.89 18.82 17.29 16.51 23.86 27.79 18.71 20.42 22.89 36.33 25.35 26.19 42.43 29.92 39.72 42.18 38.10 24.85 31.50 25.12 11.68 22.32 3 337131 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 343898 Transcript 0 9.33 3.02 14.09 11.92 12.19 11.30 16.25 7.78 13.28 16.89 11.06 9.83 3.58 26.59 10.14 13.83 9.16 13.38 4.79 9.06 6.76 3.47 7.79 5 393705 Transcript 0 0.00 0.00 0.00 3.73 0.00 0.00 0.00 1.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 0.00 0.00 0.00 6 414358 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 404792 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 497194 Transcript 0 15.66 5.46 16.26 20.86 8.06 18.24 17.32 13.40 14.46 21.57 22.28 11.54 14.94 45.60 29.19 30.89 36.15 33.38 17.69 21.31 15.04 7.80 16.24 9 260049 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 393707 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 IG47 Intergenic 0 13.46 8.14 15.92 18.94 13.50 22.63 23.45 16.25 20.99 29.24 38.90 19.19 21.82 42.69 35.27 40.75 49.60 36.93 28.82 29.99 28.15 18.51 23.84 12 IG47_AR1 ActiveIntergenicRegion 0 9.50 5.47 13.87 14.80 11.83 17.23 18.67 19.62 18.59 27.78 34.58 11.08 12.92 38.59 32.36 38.80 48.44 33.05 33.68 26.55 30.95 19.16 22.69 13 IG47_SR1 SilentIntergenicRegion 0 3.36 2.03 14.49 22.45 9.76 7.23 10.51 15.45 16.86 26.99 15.01 12.22 0.55 31.43 28.67 14.34 64.27 31.96 16.49 32.04 16.85 2.70 7.95 14 IG47_AR2 ActiveIntergenicRegion 0 16.31 10.04 17.31 21.50 14.71 26.57 26.94 14.20 22.71 30.33 42.48 24.57 28.14 45.76 37.43 42.92 50.06 39.65 26.24 32.19 26.83 18.65 25.12 15 ER1a ExonRegion 0 14.72 9.89 18.82 17.29 16.51 23.86 27.79 18.71 20.42 22.89 36.33 25.35 26.19 42.43 29.92 39.72 42.18 38.10 24.85 31.50 25.12 11.68 22.32 16 E1_Ab KnownBoundary 0 30.75 9.93 13.13 19.78 4.07 17.72 27.82 25.18 17.56 14.02 39.85 11.85 35.55 58.27 24.11 28.45 22.44 17.82 26.17 20.84 26.81 2.94 24.93 17 E1_Ac KnownBoundary 0 3.48 0.00 0.00 1.96 0.00 2.84 6.71 0.00 0.00 3.28 0.00 0.00 0.00 0.00 0.00 12.82 0.00 2.49 4.71 9.52 0.00 6.18 0.00 18 E1_Ad KnownBoundary 0 3.70 0.00 0.00 0.00 8.57 2.61 2.21 2.46 0.00 6.42 2.47 0.00 0.00 5.42 0.00 4.27 0.00 0.00 4.80 6.39 2.90 0.00 17.07 19 ER1b ExonRegion 0 57.89 10.29 21.05 21.81 36.52 38.40 34.35 39.04 27.54 37.24 40.36 8.40 32.83 69.45 30.89 46.16 20.00 25.76 27.73 32.04 41.87 18.26 33.69 20 E1_Ae KnownBoundary 1 430.67 16.44 30.81 27.94 216.30 151.39 72.52 62.39 58.22 24.44 29.85 24.61 19.48 204.19 25.96 61.86 45.54 27.98 24.85 17.64 16.74 15.31 11.78 21 ER1c ExonRegion 1 173.55 14.24 25.73 25.89 93.65 84.35 46.34 67.41 45.70 40.14 40.59 17.32 28.14 121.81 29.01 59.44 23.11 33.26 22.30 29.79 44.07 20.84 32.30 22 ER1d ExonRegion 0 220.72 13.94 29.29 27.45 116.59 96.58 50.50 61.40 50.35 43.20 34.98 17.32 24.34 146.56 29.57 64.68 33.01 27.19 30.49 30.40 38.41 22.82 27.83 23 ER1e ExonRegion 1 146.10 5.89 22.89 22.85 62.37 65.75 38.61 45.63 41.74 24.15 32.21 21.52 10.69 134.44 19.75 43.93 43.59 13.86 21.74 15.49 11.44 11.70 10.28 24 E1_Da NovelBoundary 0 5.70 12.56 22.89 21.41 11.63 9.88 33.52 8.26 21.09 27.59 15.00 6.00 19.64 38.79 15.20 33.75 60.40 28.64 16.94 29.40 11.86 3.06 22.96 25 E1a_E2b KnownJunction 0 3.26 0.00 0.00 0.00 0.00 12.72 0.00 0.00 2.84 0.00 5.16 0.00 6.82 2.12 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E1a_E2c KnownJunction 0 0.00 0.00 0.00 3.73 0.00 0.00 0.00 1.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 0.00 0.00 0.00 27 E1a_E2e KnownJunction 0 17.63 0.00 2.96 6.09 3.82 7.67 0.00 11.50 11.63 2.28 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 28 E2_Aa NovelBoundary 0 10.37 6.12 21.02 18.65 8.49 43.21 44.65 21.40 23.12 25.81 19.22 6.15 26.46 46.09 26.82 8.12 38.62 26.20 13.65 47.75 21.81 2.45 19.21 29 ER2a ExonRegion 0 11.68 5.44 14.94 7.82 12.06 17.76 25.05 11.93 18.59 23.69 24.79 6.60 10.59 41.62 23.52 30.37 43.11 22.79 32.79 20.55 25.18 10.32 22.70 30 E2_Ab KnownBoundary 0 18.15 10.06 12.60 16.88 31.32 38.05 23.14 11.91 28.39 24.93 30.85 0.00 32.30 30.90 28.43 65.37 39.64 32.67 17.51 30.62 42.26 6.12 15.11 31 E2_Ac KnownBoundary 0 20.30 5.79 18.89 11.49 37.35 29.81 32.77 13.92 21.79 22.19 28.38 0.00 0.00 57.74 44.50 40.25 38.24 32.17 24.00 33.62 21.87 14.88 15.02 32 ER2b ExonRegion 1 19.80 5.31 17.47 16.53 38.15 28.34 31.39 15.22 31.52 27.60 39.28 1.12 16.34 44.79 36.31 63.18 49.09 33.80 22.09 33.36 37.18 10.75 17.15 33 ER2c ExonRegion 0 34.49 8.76 23.36 23.07 12.41 20.70 29.77 28.22 30.27 42.21 46.79 11.90 11.70 88.95 26.50 49.32 52.01 43.86 40.55 25.88 29.30 16.33 36.40 34 E2_Da KnownBoundary 0 64.31 11.64 28.80 24.94 11.04 35.43 49.24 29.12 39.41 49.72 49.33 18.91 0.00 117.90 27.94 53.66 33.29 40.25 51.48 23.39 34.41 18.98 39.27 35 E2a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E2a_E2e KnownJunction 1 0.00 0.00 1.21 4.76 0.00 0.00 2.25 10.15 8.36 2.58 0.00 0.00 6.82 42.91 0.00 3.25 0.00 1.70 0.00 0.00 0.00 2.69 0.00 37 ER2d ExonRegion 0 34.68 8.95 21.67 28.13 20.70 39.97 36.33 21.28 30.99 36.60 39.18 11.27 8.05 81.61 31.55 43.20 61.89 42.22 37.59 25.76 25.79 16.11 23.11 38 E2_Ad KnownBoundary 0 48.90 12.89 12.09 32.43 12.14 51.67 39.44 36.23 39.35 39.51 24.48 12.60 6.82 81.94 22.99 38.71 16.74 37.76 32.47 23.01 16.06 16.17 21.60 39 ER2e ExonRegion 0 46.66 5.20 22.44 33.65 28.84 40.91 31.57 49.43 37.63 41.52 29.98 3.46 1.77 88.32 49.00 36.99 24.65 53.63 30.30 19.86 18.61 16.81 25.97 40 E2_Db KnownBoundary 0 50.82 2.83 28.27 27.40 32.77 25.78 29.90 37.54 27.31 35.40 29.95 0.00 0.00 87.23 43.02 30.68 30.67 54.43 36.52 22.88 33.73 31.72 31.93 41 E2b_E2e KnownJunction 0 33.27 0.00 4.26 5.99 25.98 26.92 0.00 20.58 11.05 2.90 0.00 0.00 0.00 24.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.18 42 ER2f ExonRegion 1 51.16 7.77 30.06 34.88 21.69 40.64 39.16 33.68 47.17 42.07 46.35 5.90 13.68 83.47 48.63 47.89 56.73 51.21 30.64 36.56 31.62 29.88 25.54 43 E2_Ae KnownBoundary 0 55.71 8.95 66.64 57.04 35.65 44.01 53.04 59.06 89.90 71.00 39.06 6.30 14.93 101.07 80.47 121.08 50.49 83.49 20.33 50.11 47.32 43.84 22.71 44 ER2g ExonRegion 1 49.08 6.65 68.84 47.08 36.99 45.52 30.61 95.72 107.19 60.72 71.97 7.33 14.79 147.81 71.64 60.39 93.63 62.52 25.00 36.65 39.59 30.74 22.56 45 E2_Dc NovelBoundary 0 3.26 0.00 0.00 3.20 3.90 0.00 8.26 0.00 1.79 1.37 2.21 0.00 0.00 4.83 15.33 4.36 3.83 0.00 13.93 3.07 9.45 2.94 7.85 46 E2c_E3a KnownJunction 1 49.86 6.58 33.82 31.03 43.55 39.92 30.34 85.97 103.18 45.96 80.70 0.00 12.99 157.28 61.56 46.65 75.83 38.59 17.41 25.57 30.89 23.64 17.07 47 I2 Intron 0 1.92 0.92 1.38 0.92 0.40 2.21 1.60 4.28 3.89 1.81 5.83 2.15 3.04 3.11 10.20 7.18 13.95 4.16 3.36 4.17 7.65 2.52 4.87 48 I2_SR1 SilentIntronRegion 0 1.94 0.93 1.39 0.93 0.41 2.24 1.62 4.33 3.93 1.83 5.90 2.18 3.08 3.15 10.32 7.26 14.10 4.21 3.40 4.22 7.73 2.55 4.93 49 E3_Aa NovelBoundary 0 0.00 3.16 3.13 0.00 0.00 2.16 8.48 4.35 2.95 1.24 12.48 0.00 6.82 2.47 6.18 16.83 12.06 3.73 11.01 6.14 17.05 2.69 7.85 50 ER3a ExonRegion 0 74.44 4.53 33.92 36.08 42.04 57.32 35.75 60.35 87.79 55.11 42.55 15.94 15.15 155.45 55.31 45.59 65.89 47.36 23.34 33.78 24.99 21.44 16.07 51 E3b_E4a KnownJunction 1 159.73 6.31 39.95 49.68 45.84 80.52 51.49 103.38 119.88 65.78 41.01 17.41 13.47 217.38 33.87 48.71 30.20 47.22 24.75 35.03 13.84 32.82 27.74 52 E3b_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER3b ExonRegion 1 119.23 6.10 29.00 44.52 53.51 75.19 41.48 88.15 113.22 64.99 45.75 11.55 20.32 187.32 33.85 57.46 34.11 51.74 22.30 37.59 17.63 31.25 29.37 54 I3_SR1 SilentIntronRegion 0 2.53 0.65 3.63 0.65 0.43 0.15 4.42 1.64 2.49 3.13 3.54 2.01 1.67 10.47 10.31 7.09 11.56 7.81 5.83 5.59 2.81 0.99 3.50 55 E4_Aa NovelBoundary 0 3.78 0.00 8.60 0.00 0.00 0.00 3.89 2.30 0.00 2.90 2.42 0.00 0.00 11.30 0.00 4.19 16.64 16.46 0.00 5.24 0.00 0.00 0.00 56 ER4a ExonRegion 0 127.79 15.35 36.38 28.99 37.83 43.08 29.78 59.56 104.53 54.00 34.23 14.25 21.11 172.59 57.25 42.02 40.99 46.80 15.36 25.70 22.61 17.42 20.18 57 E4_Da NovelBoundary 0 0.00 0.00 9.52 1.33 0.00 0.00 5.83 4.35 9.20 6.42 2.68 5.85 6.82 32.26 0.00 4.36 21.41 20.23 8.56 5.88 2.72 5.02 7.68 58 E4a_E5a KnownJunction 0 177.07 13.02 37.99 37.86 19.02 41.62 25.61 86.09 125.64 77.42 46.49 6.00 27.11 158.52 47.47 30.59 27.58 56.50 9.60 21.09 22.43 11.02 22.28 59 I4_SR1 SilentIntronRegion 0 2.81 0.00 0.00 0.00 1.80 1.23 0.89 0.00 0.00 0.00 5.19 0.00 2.59 11.37 10.35 9.97 2.22 0.00 0.00 5.63 2.96 1.40 1.97 60 E5_Aa NovelBoundary 0 7.11 2.89 8.37 0.00 0.00 13.63 2.21 6.41 2.98 1.10 4.53 0.00 7.95 18.78 9.64 7.95 12.44 20.89 3.95 6.01 6.12 0.00 0.00 61 E5a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER5a ExonRegion 0 136.20 12.20 34.86 37.41 11.51 41.26 27.27 74.93 101.34 73.23 53.73 16.88 29.78 193.35 64.12 36.26 47.37 64.86 12.74 29.36 19.17 10.42 26.87 63 ER5b ExonRegion 0 108.52 8.87 53.39 39.54 37.23 55.44 28.26 88.18 119.21 66.22 52.37 9.17 34.63 224.05 68.41 58.58 42.91 65.42 17.49 33.39 27.56 23.83 26.73 64 E5_Db KnownBoundary 0 15.71 2.76 5.09 13.75 26.57 13.51 12.54 13.47 6.42 9.43 4.79 0.00 19.48 47.21 32.63 26.92 28.70 44.89 18.17 20.20 14.64 11.02 7.77 65 E5b_E5b KnownJunction 0 245.45 0.00 51.83 26.27 55.77 67.35 42.88 95.99 136.14 84.62 43.01 0.00 13.64 271.47 75.41 43.15 31.88 37.02 17.69 23.71 13.59 38.58 38.93 66 ER5c ExonRegion 0 17.66 2.79 11.82 20.13 7.45 18.90 16.80 14.36 16.78 22.66 27.73 12.52 16.50 61.37 43.97 44.75 52.86 37.77 23.89 26.70 16.70 7.86 21.02 67 E5_Ab KnownBoundary 0 27.86 14.27 11.83 24.17 8.49 18.91 12.76 19.55 24.83 27.67 45.75 18.91 27.27 89.18 98.52 99.55 64.24 62.39 37.27 31.83 30.39 14.51 52.58 68 ER5d ExonRegion 0 147.77 13.80 70.01 55.54 46.30 64.53 45.78 120.62 125.26 69.29 75.40 30.97 61.99 262.34 81.56 83.39 95.23 55.09 37.54 47.11 35.28 33.31 41.70 69 E5_Dc KnownBoundary 1 45.56 3.16 71.82 56.34 52.89 73.54 62.27 94.72 104.17 66.51 58.91 12.60 52.92 176.00 37.95 43.32 127.44 50.24 21.74 51.13 31.82 17.64 24.67 70 ER5e ExonRegion 1 82.01 12.91 52.05 60.14 56.31 60.31 46.85 85.23 73.38 52.20 55.84 30.06 79.90 199.68 61.79 64.29 68.55 38.07 38.31 40.85 33.26 23.20 31.60 71 E5_Dd KnownBoundary 0 166.92 9.27 33.50 10.45 112.22 57.81 57.50 27.68 26.45 21.92 39.38 6.30 27.27 101.60 75.41 21.11 27.40 27.82 44.33 40.52 17.48 11.39 31.07 72 E5_De KnownBoundary 0 3.04 0.00 5.26 2.03 15.45 2.67 10.55 0.00 3.41 4.67 2.16 0.00 0.00 9.65 0.00 11.54 8.79 6.76 0.00 5.82 16.62 0.00 8.02 73 E5_Df KnownBoundary 0 6.45 2.83 6.00 11.62 4.07 15.96 20.89 4.19 20.72 6.63 5.16 30.31 0.00 16.72 10.75 21.79 28.70 14.22 22.31 10.87 9.02 8.21 13.91 74 ER5f ExonRegion 0 47.09 7.70 29.98 15.53 55.43 39.89 43.79 24.94 29.29 27.77 27.54 18.40 28.64 83.00 51.08 32.80 32.89 37.48 35.38 32.60 30.22 7.96 26.95 75 ER5g ExonRegion 1 27.51 8.13 33.09 16.35 34.78 36.68 39.72 19.01 30.88 28.67 19.33 34.64 28.14 79.58 40.62 41.61 39.61 38.80 31.85 27.66 30.85 6.25 29.37 76 ER5h ExonRegion 0 19.43 11.20 27.83 28.50 30.33 34.28 36.74 22.03 35.12 34.16 31.73 39.89 39.28 83.87 36.34 40.17 52.78 29.32 36.83 33.08 22.71 11.24 25.36 77 E5_Dg KnownBoundary 0 21.86 17.17 12.51 37.69 41.60 32.82 20.36 27.97 29.43 34.84 24.16 29.71 32.14 43.03 31.52 18.54 41.42 40.67 27.86 36.94 22.55 22.11 25.95 78 E5g_E6a KnownJunction 0 6.74 0.00 4.64 1.53 12.65 5.39 10.33 6.41 14.18 14.34 6.79 14.10 0.00 18.31 0.00 8.46 0.00 5.14 0.00 6.33 0.00 2.51 3.93 79 ER5i ExonRegion 0 13.65 8.14 20.70 21.59 8.67 17.57 17.85 12.45 12.14 20.48 16.83 10.57 13.39 29.84 14.41 17.03 19.44 29.00 11.49 15.93 13.39 7.75 11.46 80 E5_Dh NovelBoundary 0 33.27 12.17 69.16 51.64 15.53 35.04 36.30 30.19 24.19 41.42 46.70 23.41 25.16 53.39 41.78 77.42 45.63 74.91 52.52 32.85 25.45 13.66 12.72 81 E6_Aa NovelBoundary 0 31.86 13.55 36.93 64.49 34.72 33.67 32.72 43.91 33.77 44.13 39.12 0.00 19.48 96.06 19.66 47.08 48.90 56.29 25.41 23.91 27.49 18.74 15.71 82 ER6a ExonRegion 0 21.24 9.05 37.62 34.22 23.91 28.52 36.26 16.94 25.66 36.34 23.69 15.39 10.75 61.47 30.42 33.02 27.47 35.00 14.36 20.87 20.28 7.91 19.46