Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IGHMBP2 Gene 0 39.45 25.44 53.04 42.17 20.02 50.12 35.81 54.65 48.60 98.23 86.81 32.34 26.37 66.87 63.34 63.29 53.52 66.34 31.59 50.33 35.58 29.05 34.62 2 255078 Transcript 0 37.66 29.18 49.08 43.29 27.09 57.61 40.09 56.99 56.66 108.27 99.76 42.09 35.50 74.45 59.63 69.49 62.81 71.13 41.03 59.52 42.22 33.50 42.66 3 ER1a ExonRegion 0 22.83 6.60 6.17 2.60 1.45 18.39 16.91 6.91 9.39 21.50 15.41 2.81 1.27 8.49 11.61 11.34 18.26 12.38 4.83 11.95 6.38 6.73 11.18 4 E1a_E2a KnownJunction 0 7.48 0.00 4.44 1.70 0.00 8.18 0.00 21.48 8.45 40.27 30.06 0.00 6.49 2.06 5.19 12.39 13.65 15.79 13.46 11.38 5.93 0.00 0.00 5 ER2a ExonRegion 0 5.93 17.15 21.90 10.45 5.26 17.79 7.25 31.07 30.48 61.82 66.43 30.51 23.62 43.61 35.86 37.13 48.25 64.66 26.36 39.12 28.66 17.80 24.82 6 E2a_E3a KnownJunction 0 7.56 36.90 33.00 16.35 38.37 41.00 20.23 40.13 39.32 86.44 89.23 59.72 14.12 70.28 41.78 31.27 58.53 78.80 36.33 49.02 57.64 30.62 28.68 7 ER3a ExonRegion 0 14.11 34.69 51.57 33.11 24.79 63.78 52.10 54.21 63.83 116.81 127.99 61.82 72.61 88.71 50.07 63.91 70.40 90.20 40.98 67.71 53.59 47.87 37.42 8 E3a_E4a KnownJunction 1 61.71 44.93 72.91 39.62 45.33 52.02 46.33 60.71 76.36 147.55 176.94 40.96 106.00 116.19 83.32 71.43 123.33 71.22 59.95 117.29 99.89 71.70 68.03 9 E3a_E5a NovelJunction 0 6.08 0.00 2.96 2.00 0.00 2.10 4.46 4.76 1.13 14.61 5.37 0.00 0.00 4.59 0.00 8.54 13.93 9.66 8.66 11.25 0.00 0.00 0.00 10 ER4a ExonRegion 0 38.72 35.80 66.16 50.50 39.45 57.73 34.00 76.70 73.31 151.37 140.33 84.29 89.73 105.68 69.30 92.80 68.27 96.33 57.27 79.98 65.84 58.23 64.79 11 E4a_E5a KnownJunction 1 34.45 42.76 54.82 56.94 55.01 66.67 40.14 68.84 74.10 153.89 132.77 46.22 60.22 121.02 41.66 98.18 77.89 79.59 52.33 82.71 64.74 62.52 68.03 12 ER5a ExonRegion 0 17.22 41.16 40.65 43.08 30.36 70.27 67.09 60.45 57.58 129.64 114.19 85.69 75.33 95.50 49.00 92.90 76.30 67.53 43.68 70.99 40.27 37.97 54.97 13 E5a_E6a KnownJunction 1 27.19 73.87 40.09 56.07 39.73 118.34 109.88 69.00 69.88 143.39 100.29 81.48 68.83 153.10 54.89 128.00 45.82 95.76 94.69 99.14 33.79 37.05 100.22 14 E6_Aa NovelBoundary 0 31.71 0.00 0.00 3.60 4.33 0.00 7.95 0.00 5.06 8.78 21.11 6.90 13.31 2.47 0.00 4.02 4.49 1.58 0.00 0.00 0.00 0.00 0.00 15 ER6a ExonRegion 0 35.10 31.27 46.02 41.91 23.79 53.23 51.07 50.85 48.73 106.43 109.17 73.26 66.24 104.46 50.85 89.30 67.05 71.98 44.91 53.22 31.96 33.44 56.67 16 E6a_E7a KnownJunction 1 65.79 34.66 49.85 52.77 80.81 138.78 82.98 45.76 67.53 135.89 142.40 78.03 48.54 115.43 30.66 112.62 78.82 78.02 56.10 41.87 44.17 37.17 66.16 17 ER7a ExonRegion 0 37.74 40.08 44.13 36.38 33.70 89.35 70.09 56.95 67.46 130.29 154.62 92.73 64.49 98.70 56.30 99.81 72.64 101.11 49.76 69.38 35.83 45.68 55.10 18 E7a_E8a KnownJunction 0 46.75 40.85 36.66 43.28 3.31 57.47 49.86 36.39 75.98 129.37 95.23 100.83 66.23 50.62 80.23 70.41 52.55 93.27 51.86 63.98 38.12 43.90 57.88 19 ER8a ExonRegion 0 28.82 16.75 36.69 30.98 21.80 32.54 30.19 49.50 47.62 109.99 105.72 64.47 44.54 70.83 68.10 66.59 54.93 71.49 42.34 62.10 39.98 38.52 42.74 20 E8_Da NovelBoundary 0 57.71 11.12 18.01 35.23 7.39 32.03 61.39 43.46 28.88 77.25 77.39 45.01 41.72 54.80 63.79 70.75 44.13 85.06 15.81 60.08 37.87 31.47 35.68 21 E8a_E9a KnownJunction 0 30.52 23.88 29.74 20.24 14.77 16.18 28.22 47.69 20.69 55.36 33.06 18.16 6.82 23.72 27.81 34.26 21.88 61.72 9.22 23.27 30.77 18.06 15.96 22 I8 Intron 0 9.64 6.01 8.19 9.54 7.52 13.31 12.39 12.47 8.52 24.27 30.06 8.74 9.01 19.15 13.76 15.02 15.04 16.61 8.84 16.13 12.31 7.04 15.68 23 I8_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 7.06 5.05 0.00 0.00 0.00 7.44 3.43 10.62 10.11 18.01 2.86 0.00 0.00 6.13 8.19 0.00 4.01 2.83 24 I8_AR3 ActiveIntronRegion 0 4.98 6.38 0.00 0.00 6.30 0.00 8.31 0.00 0.00 0.00 19.72 8.39 6.06 18.22 8.70 4.71 12.95 1.45 5.00 8.35 5.19 4.90 11.52 25 I8_AR4 ActiveIntronRegion 1 6.35 0.00 4.49 6.81 0.00 0.00 3.09 11.52 2.47 13.38 3.22 0.00 10.94 10.83 5.80 0.00 23.11 11.09 0.00 9.93 0.00 0.00 0.00 26 I8_SR1 SilentIntronRegion 1 11.88 1.17 8.11 9.74 5.74 8.84 8.38 14.82 6.44 34.58 43.85 11.82 13.13 25.10 22.12 20.46 23.88 20.72 11.35 20.68 14.54 11.44 20.13 27 I8_AR5 ActiveIntronRegion 1 13.31 10.11 13.95 17.73 11.55 23.03 20.07 21.77 14.80 37.21 48.14 17.17 16.75 26.54 17.00 24.64 18.58 23.70 13.53 21.12 14.85 7.33 19.30 28 I8_SR2 SilentIntronRegion 0 8.47 5.95 7.71 5.38 8.04 8.21 12.25 6.44 7.06 15.38 12.96 2.27 1.67 12.14 8.15 8.60 11.78 13.64 6.24 14.98 11.61 6.20 12.99 29 I8_AR6 ActiveIntronRegion 0 6.07 4.40 2.90 4.45 3.72 10.76 5.82 6.95 5.09 14.47 14.55 0.61 1.32 11.85 8.27 6.60 8.91 11.53 3.51 9.06 11.18 5.12 12.62 30 E9_Aa NovelBoundary 0 3.48 0.00 10.64 9.46 12.82 21.81 14.09 15.28 16.87 23.85 17.32 6.15 8.28 11.95 10.14 13.07 13.56 28.31 8.56 20.84 8.53 11.88 19.97 31 ER9a ExonRegion 0 36.40 19.44 43.87 38.27 12.17 45.56 38.87 44.18 35.50 77.30 63.87 12.16 6.92 51.08 57.91 46.48 57.38 56.63 19.63 53.80 40.83 18.41 18.86 32 E9a_E10a KnownJunction 0 26.30 11.84 41.60 13.98 28.95 50.65 31.05 34.38 37.70 77.79 55.49 5.85 0.00 43.09 52.17 40.42 46.75 41.12 7.81 43.27 17.73 16.59 26.46 33 I9 Intron 0 1.03 1.99 3.57 2.32 1.31 2.99 4.10 2.10 3.90 7.24 4.41 0.00 0.00 4.81 2.95 3.87 9.14 5.54 0.52 6.24 7.53 3.39 4.31 34 I9_SR1 SilentIntronRegion 0 1.19 3.13 3.59 2.30 0.85 3.95 4.07 2.02 4.72 7.31 4.37 0.00 0.00 5.73 4.20 4.72 12.86 7.21 0.82 7.67 9.71 3.63 6.29 35 E10_Aa NovelBoundary 0 17.26 0.00 3.10 1.80 0.00 10.39 1.72 2.55 1.22 12.89 5.16 0.00 0.00 2.30 8.90 3.42 4.58 2.11 3.76 7.61 9.45 0.00 8.19 36 ER10a ExonRegion 0 34.93 25.33 45.75 32.14 11.02 39.06 17.04 44.33 41.90 74.94 75.97 11.50 11.74 47.74 63.88 42.56 60.14 34.30 24.47 51.28 35.37 19.28 26.16 37 E10a_E11a KnownJunction 0 64.53 34.73 68.66 62.10 29.20 29.13 34.89 66.83 69.88 97.80 121.40 26.71 13.64 70.46 64.90 66.14 79.94 62.80 54.50 75.93 45.53 25.17 43.45 38 ER11a ExonRegion 0 50.35 23.61 67.69 54.90 16.05 55.52 31.55 70.30 73.69 125.17 118.70 21.33 17.72 66.13 72.38 92.54 75.33 94.27 34.64 56.77 43.33 33.42 39.94 39 E11a_E12a KnownJunction 0 36.45 26.77 47.31 60.93 28.61 105.90 28.22 61.73 95.28 119.24 96.66 20.86 20.45 65.34 92.71 59.73 78.45 85.77 50.35 76.44 55.78 48.19 61.29 40 E12_Aa NovelBoundary 0 13.48 12.10 8.37 2.06 0.00 0.00 0.00 6.49 6.57 28.90 0.00 6.30 0.00 4.83 5.19 0.00 0.00 18.82 12.89 6.52 2.59 2.39 0.00 41 ER12a ExonRegion 0 45.80 19.45 83.58 67.86 29.97 73.03 35.11 86.49 79.58 127.96 112.81 27.13 19.33 71.79 74.59 90.17 91.17 88.23 48.55 70.57 53.21 35.96 42.06 42 E12a_E13a KnownJunction 0 80.38 24.54 113.15 138.21 68.00 69.56 25.53 120.68 108.71 200.20 106.24 48.62 13.31 109.54 83.94 154.57 94.16 130.83 67.95 117.74 52.63 51.80 49.85 43 ER13a ExonRegion 0 45.14 25.56 73.47 54.63 18.22 61.20 31.43 70.47 56.47 112.31 92.27 25.64 19.79 73.59 75.37 68.71 52.69 79.25 30.82 51.78 42.86 29.23 34.03 44 E13a_E14a KnownJunction 0 93.57 66.44 48.58 81.01 35.82 122.49 94.91 106.63 92.33 158.03 226.64 38.26 32.47 101.60 113.11 115.10 82.84 92.44 84.71 73.70 65.11 40.60 64.28 45 ER14a ExonRegion 0 28.77 17.34 46.20 34.72 10.86 39.61 28.29 41.22 40.64 76.15 72.91 17.17 18.92 52.73 71.71 35.87 50.89 39.88 20.01 30.92 33.76 15.16 23.17 46 E14a_E15a KnownJunction 0 12.45 3.35 53.96 34.23 15.79 34.01 23.27 76.23 39.18 83.76 49.70 30.91 33.28 79.64 78.87 32.30 62.55 51.19 34.82 37.58 34.90 24.00 24.58 47 ER15a ExonRegion 0 55.06 26.46 54.74 46.52 22.96 43.16 36.16 52.59 41.65 89.20 66.53 13.38 6.81 58.06 71.19 58.30 40.61 56.31 27.55 43.09 25.83 26.47 30.22