Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ALDH3B1 Gene 0 24.84 5.62 9.41 6.22 6.88 16.97 6.13 12.82 14.25 10.17 1.87 3.88 2.05 11.40 6.92 8.99 4.82 28.88 5.39 4.42 106.23 49.44 76.05 2 433100 Transcript 0 0.47 0.90 0.00 0.00 0.00 2.03 0.00 0.00 0.00 0.03 0.00 0.00 0.00 2.30 0.45 1.32 0.00 14.64 0.00 0.00 0.00 0.00 0.00 3 434449 Transcript 0 18.79 2.94 5.98 4.92 3.76 8.23 6.20 9.38 7.27 9.05 0.98 2.29 0.82 4.50 2.04 5.99 1.44 11.28 4.14 2.31 58.64 40.83 49.98 4 342456 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 0.00 0.00 5.64 0.00 0.00 5.44 8.94 12.72 5 7633 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 316367 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 IG2_AR1 ActiveIntergenicRegion 0 13.76 0.00 0.00 2.33 10.31 0.00 0.58 0.00 0.00 0.00 13.45 0.00 0.00 8.86 2.18 6.13 4.40 0.00 0.00 0.00 0.00 0.00 0.00 8 IG2_AR2 ActiveIntergenicRegion 0 16.52 0.00 0.94 1.99 2.49 0.00 0.53 0.00 0.00 0.00 6.23 0.00 1.17 6.25 1.45 4.58 1.65 0.00 0.00 0.00 0.00 0.00 0.00 9 IG2_AR3 ActiveIntergenicRegion 0 21.57 0.00 1.25 0.32 1.71 0.00 3.07 0.00 0.00 0.00 18.38 0.00 2.49 8.78 0.00 6.20 5.90 0.00 0.00 0.00 0.00 0.00 0.00 10 IG2_AR4 ActiveIntergenicRegion 0 28.22 0.00 1.23 0.00 0.00 0.00 3.09 0.00 0.00 0.00 10.63 0.00 4.69 11.64 0.00 14.86 9.90 0.00 0.00 0.00 0.00 0.00 0.00 11 IG2_SR2 SilentIntergenicRegion 0 16.47 0.00 0.33 0.24 4.06 0.00 1.16 0.00 0.00 0.00 5.05 0.83 0.80 5.94 2.63 5.69 2.67 0.00 0.00 0.00 0.00 0.00 0.00 12 IG2_AR5 ActiveIntergenicRegion 0 27.31 0.00 0.00 1.55 6.27 0.63 0.76 2.22 0.00 0.00 6.98 0.00 0.89 6.38 9.03 5.00 3.43 0.00 0.00 0.00 0.00 0.00 0.34 13 ER1a ExonRegion 0 0.94 1.80 0.00 0.00 0.00 4.07 0.00 0.00 0.00 0.07 0.00 0.00 0.00 2.13 0.91 2.64 0.00 15.55 0.00 0.00 0.00 0.00 0.00 14 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 13.72 0.00 0.00 0.00 0.00 0.00 15 E2_Aa NovelBoundary 0 20.74 0.00 0.00 2.06 0.00 5.79 6.23 2.55 3.56 5.91 0.00 0.00 0.00 4.94 0.00 0.00 0.00 4.60 4.71 3.20 135.48 32.51 89.03 16 ER2a ExonRegion 0 0.00 0.00 0.51 0.00 0.00 0.00 2.68 3.04 0.99 0.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.78 0.00 23.22 18.35 21.99 17 E2a_E3a KnownJunction 0 2.82 0.00 1.42 0.00 0.00 0.00 6.76 5.09 4.60 6.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.67 37.72 41.83 18 ER3a ExonRegion 0 0.00 0.00 1.23 0.00 0.00 0.00 3.97 3.46 1.24 3.44 0.00 0.00 0.00 2.44 0.00 0.00 0.00 11.09 6.37 0.00 37.46 27.09 29.37 19 ER3b ExonRegion 0 2.01 1.29 3.59 0.00 0.00 4.07 1.77 3.49 3.51 5.35 0.00 2.26 0.00 6.01 1.57 0.94 1.05 25.26 3.76 2.02 77.55 28.85 42.43 20 E3a_E4a KnownJunction 0 0.00 0.00 3.05 0.00 0.00 2.44 0.00 6.12 10.47 3.41 0.00 0.00 0.00 12.01 0.00 4.10 0.00 27.44 0.00 0.00 54.73 85.85 86.47 21 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 0.00 0.00 5.64 0.00 0.00 5.44 8.94 12.72 22 ER4a ExonRegion 0 7.39 0.00 2.17 0.00 3.02 1.97 0.00 3.73 9.70 1.73 0.00 0.31 0.00 5.30 0.00 0.39 1.44 16.12 0.00 1.57 69.88 32.52 47.67 23 E4_Da KnownBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 29.22 8.02 4.27 24 E4a_E4b KnownJunction 0 3.56 0.00 3.46 0.00 4.07 0.00 0.00 0.00 6.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 2.57 0.00 0.00 35.09 5.88 24.58 25 E4_Ab KnownBoundary 0 0.00 0.00 1.71 0.00 0.00 2.38 0.00 2.09 1.42 0.00 0.00 0.00 0.00 0.00 0.00 3.59 0.00 2.20 0.00 0.00 20.02 2.88 11.78 26 ER4b ExonRegion 0 7.06 0.00 3.68 0.00 2.68 5.50 0.00 1.73 10.70 1.15 0.00 4.33 0.00 3.25 0.00 2.97 3.30 5.54 0.00 0.00 81.54 22.92 35.24 27 ER4c ExonRegion 0 7.35 0.00 11.25 0.00 1.55 5.16 0.00 1.73 10.79 0.85 0.00 4.33 0.00 2.78 6.87 4.69 3.04 12.55 0.00 0.00 90.06 22.70 53.40 28 E4b_E5a KnownJunction 0 6.82 0.00 16.76 0.00 0.00 5.34 0.00 1.93 11.28 1.13 0.00 0.00 0.00 2.30 18.42 4.36 4.58 24.33 0.00 0.00 117.13 30.68 81.95 29 ER5a ExonRegion 0 4.30 3.63 7.91 0.15 2.26 13.59 2.93 4.41 12.92 3.41 0.81 3.08 0.00 9.66 2.88 2.21 0.95 30.60 4.11 0.25 125.76 47.56 73.56 30 E5a_E6a KnownJunction 0 11.11 3.29 4.91 1.47 0.00 5.79 0.00 7.97 12.50 7.39 0.00 0.00 0.00 12.13 4.45 3.50 0.00 20.06 0.00 2.88 112.81 53.52 60.10 31 ER6a ExonRegion 0 8.81 0.92 8.62 2.20 3.73 17.80 1.29 7.32 14.91 4.36 0.00 3.47 0.00 9.59 7.42 4.94 1.88 35.86 1.78 3.44 139.70 57.01 112.07 32 E6a_E7a KnownJunction 0 17.93 0.00 8.66 0.00 7.47 18.85 4.50 8.34 18.69 3.12 0.00 6.00 0.00 9.36 9.64 7.86 0.00 35.40 0.00 0.00 107.99 65.27 116.18 33 E6a_E8a NovelJunction 0 0.00 0.00 2.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.05 5.27 0.00 34 ER7a ExonRegion 0 8.10 0.00 4.47 0.32 2.48 9.93 1.15 10.58 15.03 5.23 0.00 5.76 0.00 11.45 5.41 2.50 0.00 27.40 0.00 3.37 157.00 51.17 80.79 35 E7a_E8a KnownJunction 0 3.78 0.00 4.79 1.60 3.31 4.43 1.94 12.82 7.84 7.52 0.00 5.70 0.00 9.89 10.14 7.78 0.00 26.45 0.00 7.61 148.39 57.01 110.63 36 ER8a ExonRegion 0 5.90 0.00 7.32 4.09 0.51 15.50 1.80 8.52 9.15 9.80 0.00 4.33 0.00 14.50 7.81 14.79 0.00 31.59 2.50 4.71 123.83 60.57 105.30 37 E8_Da KnownBoundary 0 22.00 0.00 9.49 5.36 0.00 29.41 2.21 8.09 17.10 10.66 0.00 0.00 0.00 7.00 13.35 28.11 0.00 35.65 4.61 5.62 110.58 61.05 102.01 38 E8a_E11c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER8b ExonRegion 0 8.94 1.39 4.07 2.51 5.53 16.32 2.20 11.57 13.14 7.07 0.33 1.62 0.00 13.15 6.15 6.43 1.14 27.64 0.82 2.93 129.48 55.37 78.95 40 E8_Db KnownBoundary 0 7.26 0.00 0.00 1.80 0.00 2.84 0.00 2.01 4.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 19.09 0.00 16.48 41 E8b_E8b KnownJunction 0 6.96 0.00 3.49 5.76 0.00 2.73 0.00 2.01 8.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.33 0.00 2.94 23.72 5.88 20.15 42 E8_Ab KnownBoundary 0 3.41 0.00 1.48 3.83 0.00 5.51 0.00 1.93 4.46 0.00 0.00 0.00 0.00 2.71 0.00 0.00 0.00 9.74 0.00 3.07 23.29 14.27 4.18 43 ER8c ExonRegion 0 4.23 1.36 1.23 4.09 0.00 6.72 0.00 5.76 11.12 1.15 0.00 4.33 0.00 4.87 0.00 0.00 0.00 16.63 3.19 4.26 59.50 20.84 30.35 44 ER8d ExonRegion 0 11.90 0.50 2.78 4.06 0.00 13.00 1.85 7.87 15.45 3.62 0.00 3.17 0.00 12.49 2.19 3.04 0.95 22.13 2.97 3.55 79.87 30.84 51.36 45 E8c_E9a KnownJunction 0 10.37 2.76 4.44 0.00 0.00 18.97 4.02 10.68 18.17 8.43 0.00 0.00 0.00 14.19 4.45 8.37 4.11 33.41 0.00 0.00 73.89 50.52 66.07 46 ER9a ExonRegion 0 8.26 2.19 7.84 2.48 5.59 10.98 3.42 11.94 17.36 8.72 0.03 0.29 0.00 9.41 6.72 4.88 3.22 26.03 0.97 1.30 133.99 52.47 89.31 47 E9a_E10a KnownJunction 0 42.75 2.89 6.50 0.00 3.40 16.75 2.03 10.68 8.85 3.44 0.00 6.30 0.00 18.95 6.30 8.20 8.42 34.57 0.00 0.00 150.92 42.86 87.50 48 I9_AR2 ActiveIntronRegion 0 11.01 6.10 9.68 4.09 3.48 3.67 7.41 11.75 4.69 10.44 3.67 2.16 0.00 1.62 8.99 0.00 3.30 9.24 10.19 3.40 16.97 8.33 11.45 49 I9_SR2 SilentIntronRegion 0 12.92 9.63 10.25 5.83 8.46 7.88 11.48 10.12 5.37 14.32 0.94 1.28 0.00 4.55 9.52 6.06 2.19 12.40 7.03 6.33 13.79 9.38 11.70 50 I9_SR3 SilentIntronRegion 0 10.33 6.73 12.50 10.78 5.76 11.47 9.65 5.78 4.45 16.41 2.04 3.21 0.00 7.81 5.05 8.60 7.88 16.50 12.23 16.76 13.80 14.68 11.17 51 I9_AR4 ActiveIntronRegion 0 5.67 1.85 7.61 2.91 2.44 5.29 4.42 3.05 2.97 4.79 0.29 0.54 0.00 7.29 1.77 3.15 2.00 14.51 6.03 7.29 7.19 6.57 7.44 52 ER10a ExonRegion 0 25.69 5.14 9.42 0.29 4.09 16.94 5.49 6.98 15.62 8.17 0.93 3.16 0.00 7.80 5.25 10.16 5.05 38.75 3.25 2.21 163.27 44.48 88.30 53 E10_Da NovelBoundary 0 7.48 8.81 5.71 0.00 3.48 8.52 14.13 5.71 3.15 10.66 0.00 0.00 0.00 4.59 6.18 3.25 0.00 17.16 13.74 3.20 2.35 0.00 3.84 54 E10a_E11a KnownJunction 0 54.38 5.79 10.70 1.60 3.31 11.19 5.96 14.75 14.29 4.38 0.00 0.00 0.00 21.60 4.45 10.25 4.77 43.19 0.00 0.00 140.48 46.41 105.17 55 E11_Aa NovelBoundary 0 0.00 0.00 10.41 1.73 0.00 0.00 0.00 2.26 1.39 7.63 2.53 0.00 0.00 4.77 4.45 0.00 0.00 16.42 4.05 2.68 4.94 0.00 7.77 56 ER11a ExonRegion 0 14.61 4.40 8.40 2.40 1.55 21.96 5.97 11.91 12.50 3.81 2.45 2.26 0.00 14.27 6.16 4.82 5.72 28.23 2.49 3.61 124.02 37.02 73.07 57 E11_Da KnownBoundary 0 3.11 3.22 8.52 0.00 3.99 5.56 4.42 17.25 10.82 7.39 0.00 0.00 0.00 0.00 6.18 12.22 0.00 28.77 4.71 3.20 74.19 20.94 44.13 58 ER11b ExonRegion 0 4.23 4.07 7.76 0.00 2.68 11.00 3.97 14.98 14.82 6.88 0.00 0.00 0.00 9.74 2.90 8.92 9.90 24.02 3.19 4.26 94.02 32.64 50.90 59 ER11c ExonRegion 0 8.47 7.20 13.86 2.41 1.34 11.85 3.97 19.48 12.64 8.73 1.04 0.00 0.00 11.74 10.27 8.46 4.19 28.85 2.82 3.44 113.58 36.94 81.66 60 ER11d ExonRegion 0 12.62 2.50 14.14 4.02 1.33 11.85 5.92 13.63 15.66 8.60 0.63 1.61 1.74 13.84 7.16 2.87 9.73 32.15 2.88 2.81 122.06 46.74 82.07 61 E11_Ac KnownBoundary 0 27.71 6.58 5.44 5.49 0.00 30.83 12.32 14.21 17.33 16.33 0.00 0.00 0.00 19.95 8.90 0.00 16.55 53.23 0.00 6.33 154.44 59.89 99.28 62 ER11e ExonRegion 0 15.56 3.84 8.37 6.94 2.43 14.48 6.74 14.75 16.49 11.60 0.00 0.00 0.00 13.45 5.47 7.60 9.53 37.16 6.19 3.80 97.11 48.04 69.18 63 E11_Dc KnownBoundary 0 35.04 8.42 10.91 7.72 7.56 14.88 9.41 28.71 21.47 17.16 0.00 0.00 0.00 9.06 0.00 0.00 8.88 52.07 4.61 3.13 117.13 40.35 64.62 64 ER11f ExonRegion 0 44.90 13.30 12.20 11.09 15.57 23.91 12.96 18.61 19.81 14.11 5.28 6.87 7.79 13.95 14.41 13.60 11.46 29.67 9.41 8.52 103.11 56.05 87.65 65 E11_Dd KnownBoundary 0 12.67 5.72 3.84 2.90 8.23 22.88 10.02 13.14 7.26 8.97 0.00 0.00 0.00 2.12 4.45 3.25 0.00 18.07 4.42 0.00 35.40 54.31 67.78 66 ER11g ExonRegion 0 53.56 8.81 16.01 14.75 11.27 24.68 9.17 20.02 16.21 19.88 2.93 6.87 2.45 13.51 6.12 17.98 4.33 33.83 11.63 6.92 98.03 66.42 86.12