Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMX2 Gene 0 239.27 344.61 282.84 529.08 288.56 294.88 262.73 422.39 293.94 551.23 419.21 389.01 295.02 455.03 519.81 417.37 316.60 358.77 283.21 307.96 196.01 377.62 276.18 2 278422 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 378312 Transcript 1 18.37 24.01 34.33 50.71 7.56 26.52 10.38 18.36 9.55 25.92 94.39 57.62 60.55 55.21 54.14 230.54 35.53 125.02 48.66 59.06 5.62 51.31 100.39 4 319399 Transcript 0 0.00 0.00 252.71 389.63 0.00 0.00 0.00 316.72 192.50 405.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 202.96 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 79.75 89.03 18.53 32.57 36.34 101.45 72.95 27.21 15.29 41.33 41.79 3.46 4.78 49.47 94.64 63.84 58.76 42.94 27.97 69.70 30.46 37.55 54.21 6 E1_Ab KnownBoundary 1 394.00 410.65 65.61 113.04 166.98 424.98 321.02 75.45 53.07 135.95 164.36 11.70 20.62 178.65 341.06 259.16 226.18 184.72 108.24 277.72 118.18 153.33 220.83 7 ER1b ExonRegion 0 132.63 195.00 99.67 189.67 113.66 262.90 179.36 125.62 104.22 228.44 256.81 128.36 135.01 267.44 268.80 276.14 252.31 233.09 165.03 247.36 199.42 191.71 196.11 8 E1a_E2a KnownJunction 0 29.19 96.10 248.39 544.59 91.77 70.70 42.09 354.84 312.09 598.11 468.54 452.55 225.15 781.69 1043.45 767.83 345.39 594.77 606.04 584.71 259.53 1045.87 659.60 9 ER2a ExonRegion 1 35.08 126.95 223.82 412.57 65.67 59.94 52.63 338.92 267.05 485.78 367.31 230.60 238.27 599.62 647.12 761.69 268.67 562.56 487.36 441.64 165.06 718.98 540.01 10 E2_Da NovelBoundary 0 24.23 51.31 82.23 160.52 44.40 27.37 31.40 104.86 57.70 147.90 45.96 55.82 51.94 30.96 27.44 96.21 30.29 90.91 25.22 66.73 22.05 8.39 30.13 11 E2a_E3a KnownJunction 0 63.86 125.96 189.11 226.74 64.94 67.06 59.97 278.65 241.37 315.55 227.95 164.30 260.70 134.97 180.48 279.93 185.13 296.35 111.06 173.66 88.84 145.55 168.68 12 E2a_E4a KnownJunction 1 18.37 24.01 34.33 50.71 7.56 26.52 10.38 18.36 9.55 25.92 94.39 57.62 60.55 55.21 54.14 230.54 35.53 125.02 48.66 59.06 5.62 51.31 100.39 13 E2a_E7a NovelJunction 0 0.00 10.59 19.60 59.07 3.99 2.33 2.08 10.23 2.69 20.60 2.53 0.00 0.00 4.89 4.45 4.36 0.00 49.41 9.60 59.57 0.00 0.00 3.33 14 I2 Intron 0 47.79 67.16 37.79 92.54 53.13 62.48 61.16 61.38 37.70 91.82 65.05 53.18 64.93 47.05 34.92 66.47 46.92 46.28 52.60 71.15 25.77 26.56 24.55 15 I2_AR1 ActiveIntronRegion 0 48.17 67.70 38.09 93.30 53.53 62.92 61.66 61.87 38.01 92.58 65.57 53.60 65.41 47.42 35.20 67.02 47.29 46.65 53.03 71.74 25.98 26.78 24.76 16 E3_Aa NovelBoundary 0 89.79 102.09 103.66 267.90 148.56 201.99 138.63 170.58 136.31 241.73 170.73 88.38 117.69 112.54 73.92 131.59 96.49 152.84 121.04 136.53 81.36 43.54 32.86 17 ER3a ExonRegion 1 138.87 314.31 204.55 346.46 291.82 382.09 275.64 359.35 328.29 512.36 361.54 411.41 469.70 305.46 317.99 323.47 278.58 285.28 232.08 263.16 170.48 350.78 214.56 18 E3a_E4a KnownJunction 1 408.59 677.12 253.24 350.74 240.92 714.65 493.65 409.96 409.63 590.77 397.00 939.46 755.96 525.05 976.70 711.10 313.60 456.90 616.96 430.61 206.40 990.57 632.54 19 E3a_E5a NovelJunction 0 0.00 8.49 12.18 29.23 3.14 0.00 1.63 6.78 5.50 15.88 2.05 0.00 0.00 4.89 6.30 8.46 0.00 9.24 23.34 6.14 0.00 0.00 0.00 20 I3 Intron 0 42.62 54.17 40.93 109.85 55.19 48.25 64.74 81.16 43.35 87.44 59.65 66.39 49.32 49.24 25.47 51.17 39.67 23.31 32.08 59.09 6.44 33.84 17.17 21 I3_SR1 SilentIntronRegion 0 51.11 61.42 46.28 117.36 73.36 65.03 77.77 91.82 52.32 105.43 69.75 81.32 54.48 54.12 23.97 58.45 45.13 26.15 31.08 70.38 8.11 34.07 16.72 22 I3_AR2 ActiveIntronRegion 0 41.07 56.40 42.33 122.41 44.32 36.93 61.79 83.72 40.87 82.93 59.26 60.61 53.24 52.68 32.38 52.50 40.67 24.60 39.61 57.04 5.77 40.22 21.05 23 E4_Aa NovelBoundary 0 155.51 104.19 62.24 186.36 134.21 166.04 176.34 112.95 50.17 113.95 114.98 119.14 26.46 72.40 80.23 134.41 67.98 42.86 45.18 109.87 5.81 59.58 27.32 24 ER4a ExonRegion 0 219.02 355.30 239.54 426.44 246.20 330.73 282.86 421.02 324.03 533.88 476.77 618.61 533.87 484.22 470.98 482.26 349.89 380.56 315.97 314.12 192.58 505.43 348.85 25 E4_Da NovelBoundary 0 101.57 101.30 76.96 149.30 111.80 50.14 119.50 90.53 52.11 95.95 63.81 92.88 60.71 54.86 57.73 91.26 84.06 72.09 83.39 90.63 13.96 36.99 36.79 26 E4a_E5a KnownJunction 0 367.47 304.88 314.92 519.41 324.28 303.29 324.20 502.71 342.13 559.10 493.76 554.58 525.45 533.88 469.50 496.02 417.11 365.25 358.79 345.73 257.36 524.77 362.71 27 I4 Intron 0 59.76 90.36 39.97 99.13 44.51 42.55 56.51 63.14 39.48 75.19 44.42 55.91 35.63 44.88 36.09 54.00 42.63 69.78 49.50 55.89 24.12 16.87 27.00 28 I4_AR1 ActiveIntronRegion 0 60.28 91.13 40.30 99.98 44.90 42.90 56.99 63.67 39.82 75.82 44.79 56.40 35.92 45.25 36.40 54.46 43.00 70.38 49.90 56.37 24.33 17.02 27.23 29 E5_Aa NovelBoundary 0 102.68 176.42 67.89 168.58 100.93 117.09 235.34 103.92 46.09 138.58 54.80 92.13 25.81 45.44 47.84 96.73 64.98 140.03 80.57 100.09 27.74 24.43 32.10 30 ER5a ExonRegion 1 179.61 245.85 298.23 558.99 225.49 265.66 205.52 464.91 343.21 649.05 502.68 644.16 711.66 544.23 503.79 451.62 370.10 428.83 297.31 325.05 212.73 454.05 283.87 31 E5_Da NovelBoundary 0 54.90 62.16 65.93 208.96 54.92 55.99 82.23 92.75 53.04 107.29 47.64 97.53 61.03 84.35 58.22 70.67 53.20 104.75 42.45 103.67 18.35 28.47 55.57 32 E5a_E6a KnownJunction 1 215.52 246.86 312.35 504.80 373.77 408.91 269.00 456.00 287.44 608.07 486.70 866.83 1430.91 662.08 707.09 457.06 425.34 372.25 245.84 384.65 196.27 313.45 307.39 33 E6_Aa NovelBoundary 1 328.06 362.76 60.05 170.61 275.98 170.81 268.55 121.33 73.70 147.02 61.33 116.44 144.96 79.93 98.77 86.47 35.72 45.39 73.32 106.04 22.98 44.46 25.01 34 ER6a ExonRegion 1 185.52 303.25 266.52 580.22 349.06 311.88 234.66 443.19 301.61 624.30 529.32 715.02 678.49 671.84 644.43 495.17 392.81 485.54 314.34 360.06 263.41 454.65 326.41 35 E6a_E7a KnownJunction 0 202.55 484.91 392.09 773.79 357.73 327.54 262.06 612.50 449.53 780.12 523.03 497.26 443.80 621.05 547.25 832.09 513.04 701.76 440.39 460.08 292.64 798.36 590.71 36 ER7a ExonRegion 0 195.92 373.99 284.96 583.40 302.22 319.84 279.52 428.86 283.17 593.52 406.38 451.06 399.27 551.98 562.89 484.75 355.89 539.27 291.68 320.11 227.69 377.37 322.42 37 E7a_E8a KnownJunction 0 205.37 422.95 360.96 635.28 286.50 337.08 314.62 505.29 366.52 716.30 444.22 243.53 197.23 445.70 423.76 386.65 338.76 620.93 247.63 300.28 218.38 266.37 333.51 38 I7_AR3 ActiveIntronRegion 0 56.52 70.99 38.80 61.65 52.80 57.34 61.09 53.16 24.58 39.43 27.58 27.50 38.86 27.70 31.19 44.19 28.06 23.73 20.31 21.96 9.35 15.81 14.26 39 E8_Aa NovelBoundary 0 140.32 70.25 73.24 105.58 61.29 69.34 60.77 85.23 47.34 60.73 35.64 31.21 25.00 48.44 28.06 73.31 40.30 56.54 14.12 57.65 10.87 20.76 40.29 40 ER8a ExonRegion 0 293.80 446.46 293.06 620.08 295.73 376.56 311.54 525.61 334.06 662.65 473.00 368.46 334.36 584.89 600.86 462.48 386.69 558.91 272.08 321.14 251.87 378.79 313.27 41 E8_Da KnownBoundary 1 242.49 243.11 234.85 389.03 115.96 196.25 163.49 355.21 235.24 450.74 242.90 66.32 41.23 133.91 189.63 206.36 165.87 353.43 177.23 148.61 117.25 217.26 129.67 42 E8a_E8b KnownJunction 0 0.00 0.00 252.71 389.63 0.00 0.00 0.00 316.72 192.50 405.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 202.96 0.00 0.00 0.00 0.00 0.00 43 E8_Ab KnownBoundary 0 154.18 193.65 134.09 249.98 155.01 145.94 159.12 234.57 121.44 229.80 170.41 114.04 61.52 130.44 134.74 149.79 164.66 194.46 142.40 117.03 105.08 84.62 95.86 44 ER8b ExonRegion 1 367.43 432.34 330.61 614.93 279.35 364.93 296.04 543.08 321.87 646.17 420.21 230.33 104.12 453.13 470.58 381.03 346.59 509.61 282.86 260.85 201.86 315.86 213.79 45 ER8c ExonRegion 0 347.61 462.75 350.87 672.07 357.48 369.41 337.05 516.10 343.98 669.16 474.19 395.73 192.22 542.54 577.06 449.24 328.39 468.80 269.67 324.97 243.87 355.26 295.79 46 E8_Db KnownBoundary 0 334.13 545.63 476.95 758.84 468.34 527.76 476.21 647.53 386.45 758.66 433.27 603.65 324.00 624.35 668.40 493.03 320.99 432.61 354.83 440.96 250.38 454.05 334.37 47 ER8d ExonRegion 0 306.30 391.99 368.65 654.27 375.65 269.56 293.76 512.53 339.88 614.58 459.15 392.52 198.15 432.03 624.33 414.29 324.03 246.60 335.35 322.47 163.45 412.69 261.51 48 IG30 Intergenic 0 27.03 18.15 29.00 26.44 24.32 55.69 30.13 31.63 25.16 32.32 43.83 10.93 6.53 72.84 90.33 78.10 45.14 44.22 26.60 30.83 28.86 10.57 36.30 49 IG30_AR1 ActiveIntergenicRegion 0 27.12 18.20 29.09 26.52 24.40 55.87 30.23 31.73 25.23 32.42 43.96 10.97 6.55 73.07 90.61 78.35 45.28 44.35 26.68 30.93 28.95 10.61 36.42