Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 STX3 Gene 0 40.17 52.30 42.17 41.01 27.24 5.66 10.26 51.74 37.06 6.14 77.98 12.26 11.82 11.24 9.86 32.83 4.69 10.62 14.30 36.02 21.70 62.66 72.84 2 437946 Transcript 0 0.65 2.64 5.23 8.54 0.83 0.00 1.01 6.99 8.42 0.52 0.91 0.62 1.31 0.37 0.31 0.91 0.51 3.58 1.48 3.74 2.36 4.49 12.16 3 337979 Transcript 0 25.54 19.34 21.56 23.48 20.40 5.39 6.31 22.91 21.27 7.39 106.08 29.06 26.09 22.09 17.18 60.13 7.64 6.29 8.77 20.16 27.60 88.10 102.26 4 300150 Transcript 0 0.00 6.71 4.76 0.00 0.00 0.00 0.00 4.39 0.00 0.00 5.37 0.00 0.00 0.00 0.00 3.59 0.00 0.00 0.00 6.26 3.15 8.82 8.45 5 ER1a ExonRegion 0 2.32 2.10 1.19 1.25 0.94 0.32 0.35 3.26 1.93 0.10 7.03 0.00 2.58 0.55 1.41 1.94 0.00 2.14 2.54 8.63 3.85 6.87 11.05 6 E1a_E2a KnownJunction 0 10.08 17.37 8.19 13.32 0.00 0.00 0.00 27.93 23.61 2.79 37.90 0.00 6.82 7.06 8.90 12.82 0.00 15.09 26.64 31.51 5.68 51.01 112.34 7 ER2a ExonRegion 0 19.10 16.92 22.32 18.04 12.04 2.23 5.45 28.58 22.70 2.40 62.64 1.19 4.13 6.07 6.49 13.98 2.04 12.96 13.04 31.56 12.67 33.39 84.53 8 E2a_E3a KnownJunction 0 6.22 17.43 37.37 19.78 4.24 0.00 6.23 34.54 15.42 2.47 76.39 6.30 6.01 7.06 4.45 18.88 8.88 4.35 4.05 24.29 14.46 41.39 57.62 9 E2a_E4a NovelJunction 0 0.00 0.00 0.00 6.83 4.33 0.00 0.00 4.44 9.35 0.00 4.84 0.00 0.00 0.00 0.00 4.36 0.00 4.44 0.00 21.80 0.00 2.94 0.00 10 ER3a ExonRegion 0 19.98 14.34 41.12 28.01 17.77 3.23 4.87 46.93 32.76 6.04 116.94 7.36 20.45 14.93 11.08 30.52 1.85 9.20 17.17 26.02 27.79 62.78 95.29 11 E3a_E4a KnownJunction 0 16.74 8.75 51.77 31.66 19.27 5.56 8.17 51.63 29.40 7.41 100.76 6.30 19.64 16.83 10.63 65.11 0.00 12.85 25.13 15.28 34.53 48.13 123.01 12 ER4a ExonRegion 0 17.16 17.16 54.99 43.99 25.26 3.72 9.67 63.31 34.65 6.96 105.05 10.04 28.89 18.58 11.76 37.25 6.47 13.85 30.37 52.40 34.61 65.78 110.46 13 E4_Da NovelBoundary 0 20.89 6.45 21.35 7.42 0.00 0.00 2.03 13.64 10.85 0.00 25.37 0.00 0.00 2.47 0.00 11.79 0.00 2.28 0.00 11.76 7.72 3.00 14.68 14 E4a_E5a KnownJunction 0 23.86 16.90 46.75 51.18 32.26 5.68 0.00 84.98 44.62 8.03 137.67 19.66 20.94 12.18 4.57 18.03 13.00 19.73 24.09 40.27 35.58 64.48 121.98 15 ER5a ExonRegion 0 21.88 16.93 32.36 43.63 33.41 3.96 5.10 57.06 50.37 7.54 136.87 10.95 13.10 18.99 12.63 48.38 4.66 22.96 14.01 51.81 47.06 88.73 122.39 16 E5a_E6a KnownJunction 0 17.78 31.05 18.33 44.82 23.85 4.43 1.63 52.00 53.21 8.73 90.55 25.36 25.32 17.48 17.92 36.32 3.46 17.37 16.19 39.37 47.20 64.11 109.18 17 ER6a ExonRegion 0 30.74 35.50 42.18 54.95 17.77 7.60 6.85 59.02 56.11 6.31 99.87 7.75 16.48 19.13 4.18 56.39 7.81 14.82 19.96 51.98 35.38 76.46 89.12 18 E6a_E7a KnownJunction 0 34.45 26.57 42.78 59.90 28.86 7.89 4.15 50.69 53.99 2.71 95.92 18.16 27.11 19.25 9.52 57.08 8.70 11.61 27.67 63.28 30.09 84.81 76.74 19 ER7a ExonRegion 0 16.76 39.08 26.58 35.14 27.44 5.20 6.07 44.36 55.50 3.38 108.56 30.42 29.03 16.86 8.27 61.13 4.37 17.88 22.47 52.56 34.75 79.48 99.61 20 E7a_E8a KnownJunction 0 18.45 45.12 33.94 35.56 35.57 2.84 10.11 53.60 45.77 4.06 101.60 36.76 14.12 11.89 8.90 47.51 9.44 21.47 28.89 32.34 41.45 54.50 105.08 21 ER8a ExonRegion 0 19.85 59.46 38.94 37.40 25.67 3.60 12.57 45.34 42.36 5.11 108.74 15.46 23.62 18.31 9.13 61.09 13.57 16.66 8.64 45.59 41.22 86.00 95.78 22 E8_Da NovelBoundary 0 9.56 15.33 8.04 10.59 3.31 0.00 3.36 16.72 18.26 0.00 12.48 0.00 6.82 0.00 10.26 0.00 0.00 9.20 4.24 22.69 9.45 0.00 8.37 23 E8a_E9a KnownJunction 0 24.08 9.41 16.35 7.96 20.71 2.84 3.89 13.39 16.72 2.82 77.60 18.46 6.82 26.90 18.54 76.39 4.11 6.38 0.00 19.37 23.78 82.67 102.52 24 E8a_E10a KnownJunction 0 0.00 0.00 4.52 4.06 0.00 0.00 0.00 4.89 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 0.00 0.00 25 E8a_E11a KnownJunction 0 0.00 6.71 4.76 0.00 0.00 0.00 0.00 4.39 0.00 0.00 5.37 0.00 0.00 0.00 0.00 3.59 0.00 0.00 0.00 6.26 3.15 8.82 8.45 26 I8 Intron 0 4.82 25.42 6.06 10.23 2.20 0.41 3.75 12.01 13.73 0.26 4.83 2.80 0.93 0.38 0.96 3.77 0.25 4.83 6.30 14.29 4.77 9.87 16.00 27 I8_SR1 SilentIntronRegion 0 4.30 24.68 6.72 11.09 1.94 0.35 3.71 11.46 13.27 0.33 4.58 1.90 0.00 0.37 0.91 3.74 0.16 5.37 7.55 14.81 4.05 10.08 16.20 28 I8_AR1 ActiveIntronRegion 0 6.62 28.10 3.87 7.35 3.08 0.60 3.92 13.98 15.41 0.00 5.72 5.91 4.08 0.41 1.15 3.91 0.54 3.02 2.10 12.61 7.25 9.23 15.42 29 E9_Aa NovelBoundary 0 18.30 40.98 6.83 20.41 0.00 0.00 0.00 11.21 23.23 0.00 4.37 0.00 0.00 0.00 0.00 11.11 4.39 6.96 4.80 5.69 3.09 23.70 23.56 30 ER9a ExonRegion 0 28.11 48.60 34.81 35.82 25.05 7.83 8.99 45.58 37.31 7.49 127.52 38.11 30.55 21.89 13.33 55.21 9.93 8.19 13.32 41.12 42.15 80.00 122.49 31 E9_Da NovelBoundary 0 5.63 6.31 6.98 11.32 12.99 10.56 2.12 17.74 12.62 1.53 7.48 0.00 6.82 2.47 6.30 0.00 0.00 0.00 0.00 5.82 13.71 11.45 55.32 32 E9a_E11a KnownJunction 0 24.45 0.00 13.51 26.67 15.45 5.51 6.05 9.78 9.78 11.87 113.13 30.61 40.91 17.48 19.66 48.79 8.88 4.31 12.99 0.00 16.87 101.65 81.78 33 E9a_E12a NovelJunction 0 10.45 54.86 23.24 37.82 0.00 0.00 2.08 24.89 29.22 1.67 7.32 0.00 8.28 0.00 0.00 4.19 0.00 12.31 13.55 35.67 9.45 13.04 20.83 34 I9 Intron 0 2.72 7.84 3.91 8.70 2.29 2.36 1.70 13.25 10.25 0.00 4.14 0.00 1.66 2.29 1.76 8.92 2.83 3.54 0.00 8.21 9.43 15.18 36.50 35 I9_AR1 ActiveIntronRegion 0 2.77 7.98 3.98 8.85 2.33 2.40 1.73 13.47 10.43 0.00 4.21 0.00 1.68 2.33 1.79 9.07 2.88 3.60 0.00 8.35 9.59 15.44 37.05 36 E10_Aa NovelBoundary 0 7.26 38.22 6.71 11.69 3.65 2.38 0.00 19.47 11.28 0.00 13.69 0.00 0.00 2.35 0.00 7.60 4.49 2.40 0.00 33.11 16.93 10.65 37.13 37 ER10a ExonRegion 0 1.94 7.93 7.92 15.29 2.48 0.00 3.04 8.27 13.25 1.57 2.72 1.87 3.93 1.10 0.94 2.73 1.52 8.41 4.45 8.34 7.07 13.48 36.48 38 E10_Da NovelBoundary 0 3.70 8.81 12.27 13.92 4.16 4.66 6.23 14.33 14.93 0.00 9.37 0.00 0.00 2.41 0.00 12.48 0.00 8.50 0.00 17.58 3.15 26.51 62.57 39 E10a_E12a KnownJunction 0 0.00 0.00 3.25 6.26 0.00 0.00 0.00 7.80 10.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 0.00 0.00 40 I10 Intron 0 3.45 4.49 3.86 8.48 5.14 1.67 3.56 9.52 7.51 1.31 5.75 3.36 2.32 1.01 0.75 5.42 0.48 5.24 3.06 8.57 5.07 12.10 21.42 41 I10_SR1 SilentIntronRegion 0 3.85 4.46 4.30 9.13 5.73 1.86 3.68 10.34 7.98 1.46 6.21 3.33 2.58 0.78 0.72 6.04 0.53 5.70 3.07 8.77 5.54 12.60 23.26 42 E11_Aa NovelBoundary 0 12.37 0.00 0.00 16.65 11.63 0.00 21.99 16.68 17.85 0.00 10.11 0.00 0.00 0.00 0.00 15.04 0.00 2.57 4.33 17.39 8.22 21.19 19.12 43 ER11a ExonRegion 0 14.37 11.63 21.84 21.28 30.42 2.90 8.86 18.51 11.48 7.92 108.28 31.94 24.73 19.93 9.19 58.90 4.31 4.68 15.06 12.71 24.51 105.02 85.76 44 E11_Da NovelBoundary 0 3.33 3.09 1.39 28.73 3.99 0.00 2.25 26.62 10.04 1.67 4.79 0.00 0.00 9.36 0.00 11.28 0.00 1.91 0.00 16.55 14.64 20.39 43.96 45 E11a_E12a KnownJunction 0 18.08 0.00 11.83 14.82 7.72 4.71 13.29 13.06 7.52 10.88 108.71 50.12 27.43 26.02 4.45 49.13 3.93 2.11 13.18 0.00 27.37 105.87 84.85 46 I11 Intron 0 10.86 10.02 7.48 15.95 10.00 2.31 6.50 14.67 12.43 2.50 10.09 4.44 2.76 1.98 1.03 8.56 0.59 1.99 3.73 8.19 5.40 28.70 30.14 47 I11_AR1 ActiveIntronRegion 0 5.85 7.48 8.91 14.38 6.26 0.61 5.83 7.86 9.18 1.13 6.76 1.74 1.09 1.91 0.19 9.06 0.87 2.25 1.20 8.34 6.68 20.93 30.01 48 I11_SR1 SilentIntronRegion 0 4.23 5.74 3.08 9.22 5.12 1.67 6.28 7.16 7.74 0.69 5.66 3.77 0.80 1.24 1.52 4.55 0.10 1.35 0.43 3.09 0.55 15.52 18.32 49 I11_AR2 ActiveIntronRegion 0 11.52 10.58 7.35 15.84 11.19 3.83 7.70 15.32 14.90 2.36 11.72 6.65 5.53 2.09 0.32 5.43 0.80 1.58 3.24 8.79 2.81 35.54 21.52 50 I11_SR2 SilentIntronRegion 0 14.82 9.82 8.54 18.97 19.25 3.54 7.06 21.56 15.33 5.54 12.24 5.39 3.50 2.13 1.96 10.22 0.00 0.99 7.78 9.70 6.09 34.96 41.32 51 I11_AR3 ActiveIntronRegion 0 18.89 15.63 8.99 21.69 11.94 2.13 5.60 23.99 15.13 4.15 14.15 4.68 2.22 2.41 2.07 14.44 0.70 3.21 7.80 10.51 10.83 35.82 45.37 52 E12_Aa NovelBoundary 0 14.22 6.58 14.52 27.67 7.47 0.00 4.06 30.60 14.41 0.00 7.32 23.26 0.00 2.18 0.00 39.65 0.00 8.25 4.80 18.41 16.49 23.76 82.55 53 ER12a ExonRegion 0 63.23 80.74 60.38 57.70 38.59 8.18 14.88 72.89 49.26 8.38 90.36 14.16 10.57 12.26 13.22 36.98 5.44 12.31 17.60 44.56 22.62 76.42 81.73