Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 YPEL4 Gene 0 30.36 67.44 41.56 85.16 47.90 109.99 14.79 56.03 143.29 71.16 0.00 2.27 0.00 0.08 0.51 4.84 1.76 39.85 9.16 43.95 29.84 34.08 23.85 2 300022 Transcript 0 18.50 40.96 39.93 62.42 26.05 94.32 5.80 39.86 125.52 55.91 0.00 1.12 0.00 0.02 0.30 4.66 1.40 39.60 3.15 32.87 26.30 22.82 19.62 3 ER1a ExonRegion 0 1.81 4.31 2.12 1.51 2.60 22.23 0.52 1.04 8.29 4.73 0.00 0.70 0.00 0.00 0.00 0.02 0.00 2.84 0.62 3.45 2.53 3.81 4.00 4 E1a_E2a KnownJunction 0 6.59 12.76 12.60 15.35 4.24 10.96 0.00 11.42 74.33 32.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.03 0.00 2.56 6.05 33.56 34.06 5 I1 Intron 0 6.79 14.05 19.25 25.74 13.47 30.43 7.92 24.11 57.63 33.61 0.00 0.98 0.00 0.00 0.00 0.77 0.14 26.82 3.84 29.30 14.88 9.19 6.64 6 I1_AR1 ActiveIntronRegion 0 6.79 14.06 19.27 25.76 13.49 30.45 7.93 24.13 57.68 33.64 0.00 0.98 0.00 0.00 0.00 0.77 0.14 26.85 3.84 29.33 14.89 9.20 6.64 7 E2_Aa NovelBoundary 0 0.00 5.79 17.50 22.84 7.47 24.76 3.80 8.83 42.19 33.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.32 4.80 17.71 17.73 5.57 7.77 8 ER2a ExonRegion 0 10.15 26.39 37.84 55.45 18.75 79.65 8.11 43.31 132.91 67.42 0.00 1.12 0.00 0.00 0.00 3.66 1.79 50.04 6.00 37.83 41.40 24.30 22.79 9 E2_Da NovelBoundary 0 0.00 0.00 4.76 6.73 4.33 8.52 4.50 5.54 9.72 23.45 0.00 5.70 0.00 0.00 0.00 0.00 0.00 12.93 4.61 3.13 6.05 3.12 8.02 10 E2a_E3a KnownJunction 0 17.41 55.12 59.58 84.74 20.03 110.62 1.81 51.10 147.71 55.36 0.00 0.00 0.00 0.00 0.00 7.43 4.77 46.39 0.00 53.43 32.19 17.02 3.76 11 I2 Intron 0 1.88 1.81 5.96 10.84 0.00 7.61 2.75 6.87 9.28 11.15 0.00 0.00 0.00 0.00 0.00 0.88 2.94 2.45 1.89 7.57 9.14 1.24 3.48 12 I2_AR1 ActiveIntronRegion 0 1.35 2.49 4.30 8.79 0.00 8.71 2.76 1.19 9.51 12.37 0.00 0.00 0.00 0.00 0.00 1.89 5.65 1.76 1.27 9.31 8.93 1.09 2.90 13 I2_SR1 SilentIntronRegion 0 2.40 1.24 7.56 12.90 0.00 6.81 2.80 12.08 9.28 10.31 0.00 0.00 0.00 0.00 0.00 0.00 0.59 3.12 2.48 6.19 9.52 1.39 4.08 14 E3_Aa NovelBoundary 0 6.52 9.34 18.66 11.62 8.49 8.35 7.46 9.20 10.27 17.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.89 4.52 11.38 17.98 6.12 0.00 15 ER3a ExonRegion 0 5.58 35.22 39.69 39.62 10.82 76.94 3.55 29.66 107.88 42.23 0.00 0.10 0.00 0.00 0.00 5.13 2.25 28.22 0.00 26.79 26.75 8.19 11.88 16 E3_Da NovelBoundary 0 23.12 12.10 21.50 50.68 12.56 38.05 19.43 23.95 44.94 30.00 0.00 5.55 0.00 0.00 0.00 0.00 0.00 24.71 4.33 47.75 35.40 11.82 19.12 17 E3a_E4a KnownJunction 0 2.89 27.43 29.98 22.87 8.40 60.65 2.25 18.28 79.40 32.40 0.00 0.00 0.00 0.00 0.00 4.27 0.00 24.50 0.00 21.16 23.48 0.00 3.24 18 I3 Intron 0 10.42 17.45 25.82 48.72 25.51 40.50 7.57 31.51 62.29 36.93 0.31 1.13 0.00 0.42 0.33 4.25 0.52 22.03 5.06 24.34 29.74 16.55 45.26 19 I3_AR1 ActiveIntronRegion 0 10.49 17.56 25.98 49.03 25.67 40.75 7.62 31.71 62.67 37.16 0.31 1.14 0.00 0.43 0.33 4.28 0.53 22.17 5.09 24.49 29.92 16.66 45.54 20 E4_Aa NovelBoundary 0 34.45 34.99 20.52 67.49 15.70 90.69 32.24 27.60 68.11 37.34 2.68 12.15 0.00 0.00 0.00 7.60 0.00 42.28 4.80 16.68 14.27 14.63 28.94 21 ER4a ExonRegion 0 27.30 55.15 62.61 109.94 40.50 140.82 9.94 62.34 173.46 78.36 0.00 5.32 0.00 0.00 2.08 11.26 1.61 54.72 4.70 54.28 40.41 38.48 21.61 22 E4a_E5a KnownJunction 0 48.75 51.77 63.95 115.87 57.13 205.73 4.20 66.33 225.00 99.34 0.00 0.00 0.00 0.00 0.00 4.36 0.00 77.56 3.67 40.01 31.69 34.05 44.99 23 I4 Intron 0 6.21 3.67 9.07 11.00 0.60 5.38 7.47 9.88 7.48 7.71 0.00 3.56 0.00 0.00 0.46 0.00 0.74 9.53 7.91 12.96 10.44 1.41 5.30 24 I4_AR1 ActiveIntronRegion 0 6.26 3.70 9.15 11.09 0.61 5.43 7.54 9.97 7.54 7.78 0.00 3.58 0.00 0.00 0.47 0.00 0.75 9.62 7.98 13.08 10.54 1.42 5.34 25 E5_Aa NovelBoundary 0 10.89 11.97 11.92 19.34 4.33 24.99 16.69 21.15 13.57 24.04 0.00 6.30 0.00 0.00 4.45 0.00 4.77 8.83 0.00 10.80 10.87 15.12 3.41 26 ER5a ExonRegion 0 46.04 100.51 50.98 116.40 72.00 141.30 21.81 75.26 180.66 90.46 0.00 2.83 0.00 0.14 0.66 5.79 2.22 45.15 13.36 56.30 32.20 45.99 30.23 27 IG25 Intergenic 0 4.67 11.86 8.37 9.36 9.51 4.49 17.72 10.67 7.40 10.47 0.19 2.52 0.00 0.03 0.06 0.15 0.49 10.06 5.62 11.37 6.05 1.12 3.89 28 IG25_SR1 SilentIntergenicRegion 0 4.95 11.36 7.50 8.18 9.21 4.78 17.60 10.62 7.10 10.02 0.22 2.75 0.00 0.00 0.08 0.10 0.46 7.39 5.01 11.72 5.42 1.60 3.90 29 IG25_AR1 ActiveIntergenicRegion 0 4.02 13.07 10.46 12.16 10.25 3.83 18.04 10.81 8.12 11.56 0.12 1.97 0.00 0.11 0.00 0.24 0.54 16.39 7.08 10.57 7.56 0.00 3.87