Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TNKS1BP1 Gene 0 46.21 35.85 164.23 98.88 36.49 34.95 35.55 109.50 103.37 146.06 22.14 7.11 6.36 27.41 20.81 29.64 34.60 130.48 170.94 79.92 553.72 268.49 288.00 2 326757 Transcript 0 13.56 7.30 64.57 25.87 6.28 10.33 8.08 30.39 24.62 51.68 1.95 0.00 6.01 8.59 0.00 3.16 13.65 50.61 51.86 37.52 127.32 24.86 94.58 3 358252 Transcript 0 51.74 28.41 182.93 91.62 40.92 35.87 33.92 98.79 90.65 140.33 16.74 7.12 1.67 25.20 29.14 26.47 35.17 141.31 148.31 75.14 551.32 287.63 311.87 4 427750 Transcript 0 19.38 7.74 36.66 21.29 8.06 6.21 8.76 23.66 17.46 25.33 3.98 0.72 0.00 3.84 3.42 3.68 5.89 28.50 19.93 14.47 85.46 47.71 58.26 5 ER1a ExonRegion 0 4.59 1.59 14.70 6.56 3.96 0.26 5.03 10.66 12.04 15.14 3.61 0.00 0.00 2.19 1.04 8.92 9.97 35.00 100.28 9.91 92.09 49.05 153.70 6 E1a_E2a KnownJunction 0 3.63 3.35 43.58 19.51 0.00 2.56 2.25 35.61 38.05 42.93 4.84 0.00 0.00 0.00 0.00 0.00 18.51 78.72 18.54 14.89 40.77 18.49 21.60 7 ER2a ExonRegion 0 7.43 3.45 47.87 24.02 1.94 4.87 6.12 42.72 38.96 74.01 9.79 0.05 0.41 13.25 7.97 15.29 23.73 84.71 132.62 49.81 286.95 98.03 165.58 8 E2a_E3a KnownJunction 0 18.74 13.02 86.34 58.47 7.64 14.42 3.84 82.89 78.85 130.28 16.95 0.00 6.82 24.96 10.75 52.64 22.16 268.99 524.72 99.71 306.97 283.33 973.57 9 ER3a ExonRegion 0 16.88 15.97 105.03 49.79 11.57 19.95 20.83 87.32 92.87 136.56 17.23 6.96 4.52 27.93 21.21 24.41 33.00 137.47 184.11 83.76 507.97 218.10 222.64 10 E3a_E4a KnownJunction 0 21.34 37.43 172.26 80.88 34.38 33.79 28.13 168.24 176.50 275.47 14.64 12.60 19.80 66.04 38.20 36.91 91.16 221.65 345.99 134.42 718.53 518.53 443.97 11 E4_Aa NovelBoundary 0 6.96 9.41 20.31 10.49 0.00 0.00 2.08 16.72 6.74 2.50 0.00 7.65 0.00 6.71 0.00 12.48 0.00 13.97 12.24 5.94 33.17 16.84 31.67 12 ER4a ExonRegion 0 8.13 21.96 188.78 84.28 25.27 31.44 33.91 159.68 167.92 242.01 26.78 31.30 14.74 41.39 33.99 45.13 63.85 223.84 269.03 98.08 816.44 358.19 359.95 13 E4a_E5a KnownJunction 0 17.41 16.05 216.17 105.31 38.79 34.92 50.70 190.34 166.17 234.32 37.27 18.16 12.82 33.20 33.25 61.10 54.42 247.60 302.79 84.69 963.42 507.81 533.18 14 ER5a ExonRegion 0 11.73 22.69 111.60 54.37 19.69 20.75 25.14 67.71 80.24 129.22 18.99 6.96 6.65 29.18 17.98 24.96 33.34 113.46 168.85 66.07 515.96 218.38 229.91 15 E5a_E6a KnownJunction 0 23.34 42.49 165.04 106.35 35.48 41.57 36.96 97.63 126.33 152.25 16.69 0.00 6.17 35.43 29.67 32.47 34.13 149.23 209.42 77.28 557.54 254.43 248.75 16 ER6a ExonRegion 0 39.12 34.27 159.79 89.39 43.31 44.78 46.27 108.44 107.10 152.52 25.13 9.51 9.38 33.33 23.37 34.07 39.65 139.33 183.81 89.93 655.16 280.55 333.98 17 E6_Da KnownBoundary 0 50.97 44.79 185.86 88.47 59.93 63.83 52.11 86.83 111.28 142.72 34.69 10.80 7.14 28.55 13.60 41.70 39.18 124.32 183.44 84.37 510.40 221.05 335.22 18 E6a_E12b KnownJunction 0 13.56 7.30 64.57 25.87 6.28 10.33 8.08 30.39 24.62 51.68 1.95 0.00 6.01 8.59 0.00 3.16 13.65 50.61 51.86 37.52 127.32 24.86 94.58 19 ER6b ExonRegion 0 36.09 27.82 141.29 70.45 37.71 34.00 38.05 67.97 92.10 123.66 20.04 4.24 5.02 23.34 15.98 25.91 26.68 119.84 147.59 64.87 507.36 240.21 284.71 20 E6_Db NovelBoundary 0 6.45 11.38 21.76 9.69 6.71 7.21 23.80 36.06 41.20 22.59 4.69 0.00 0.00 4.71 0.00 0.00 0.00 33.37 38.78 20.33 86.06 40.90 131.46 21 E6b_E7b KnownJunction 0 47.12 23.61 120.60 47.78 24.53 24.70 13.03 68.27 48.41 130.47 7.32 0.00 0.00 19.25 43.39 45.03 22.44 114.54 165.37 39.31 478.10 304.94 244.31 22 I6 Intron 0 13.01 18.00 24.17 31.02 15.43 10.81 12.26 33.98 31.63 25.86 3.24 2.31 1.93 3.10 1.84 4.50 4.04 22.91 30.05 24.60 89.73 58.92 78.35 23 I6_AR1 ActiveIntronRegion 0 16.16 20.15 25.12 36.75 18.31 8.94 14.82 33.37 38.08 27.83 3.46 2.62 2.81 4.30 2.42 3.96 4.15 19.33 27.16 27.56 77.57 64.41 77.86 24 I6_SR1 SilentIntronRegion 0 12.20 19.17 20.74 26.95 14.88 11.32 13.71 32.91 30.41 23.96 3.29 2.53 1.93 2.94 1.17 4.44 4.36 22.67 33.02 25.79 90.66 61.01 84.05 25 I6_AR2 ActiveIntronRegion 0 16.09 22.67 33.38 45.73 23.52 9.61 10.70 50.01 33.36 38.22 3.28 1.04 1.13 2.49 1.96 6.53 5.31 29.88 36.54 25.37 115.38 63.08 83.86 26 I6_SR2 SilentIntronRegion 0 6.19 11.24 22.61 26.91 9.27 11.57 5.44 29.78 25.16 17.17 2.27 1.99 1.19 2.12 1.92 2.88 2.77 22.60 25.92 17.36 88.37 38.55 54.74 27 I6_AR3 ActiveIntronRegion 0 14.43 7.86 33.60 27.67 8.87 13.51 7.07 27.98 27.79 28.34 3.57 2.11 1.42 2.77 4.24 6.02 1.82 26.22 17.01 17.63 88.01 52.56 68.65 28 E7_Aa NovelBoundary 0 22.00 20.79 88.67 56.67 15.28 33.16 6.76 58.16 44.36 59.74 2.37 0.00 0.00 2.47 0.00 3.67 9.16 39.17 56.66 32.60 109.84 32.03 133.85 29 ER7a ExonRegion 0 24.34 13.05 36.23 19.74 12.13 6.27 3.66 24.17 18.26 22.96 6.15 0.00 0.00 1.79 4.45 5.85 0.33 30.98 14.39 14.68 68.50 65.84 72.83 30 E7_Ab KnownBoundary 0 70.16 11.31 70.72 52.04 26.32 24.99 18.77 58.49 39.41 53.24 16.95 0.00 0.00 2.47 13.47 8.72 0.00 61.31 41.22 19.49 94.27 103.12 167.91 31 ER7b ExonRegion 0 49.20 32.59 183.71 94.85 30.68 38.67 32.16 103.95 94.59 137.47 20.39 2.31 2.69 17.64 17.61 24.30 25.25 107.99 121.10 78.58 492.54 240.78 266.19 32 E7_Da NovelBoundary 0 3.78 0.00 12.83 9.39 4.33 16.01 5.74 6.98 8.42 4.30 0.00 0.00 0.00 2.47 0.00 0.00 0.00 6.88 0.00 2.56 8.65 14.27 8.71 33 E7a_E8a KnownJunction 0 10.52 0.00 1.45 3.23 0.00 0.00 8.39 4.89 1.39 7.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 2.78 5.94 8.71 34 E7a_E8b KnownJunction 1 72.01 33.81 286.89 156.62 60.53 48.89 50.70 160.15 131.45 166.87 22.85 17.11 0.00 33.02 28.06 8.46 56.38 189.57 131.96 121.25 668.49 317.74 406.58 35 ER8a ExonRegion 0 23.28 10.17 72.30 40.89 12.04 12.38 14.23 41.92 32.73 45.30 5.80 2.16 0.00 9.74 5.80 5.20 17.33 54.51 40.61 28.72 185.11 71.36 93.24 36 ER8b ExonRegion 0 102.54 44.86 263.96 150.78 39.73 58.06 46.14 164.38 134.03 182.07 25.30 8.43 3.81 26.48 20.23 30.14 49.10 170.70 124.93 90.77 647.99 261.97 334.62 37 E8a_E9a KnownJunction 0 198.85 59.86 324.74 194.28 35.40 80.86 49.06 209.64 161.75 165.50 27.01 6.30 0.00 34.26 37.46 32.90 55.07 168.05 137.04 109.04 690.92 263.12 275.55 38 ER9a ExonRegion 0 182.22 69.11 333.99 204.89 77.36 56.78 52.28 223.69 161.18 200.01 24.70 9.10 3.77 34.15 23.06 28.98 44.84 196.86 151.48 94.73 669.57 313.58 344.34 39 E9a_E10a KnownJunction 0 190.26 99.13 359.57 229.04 91.17 67.06 46.42 233.26 153.50 214.20 36.54 6.00 7.14 21.01 14.71 33.41 30.86 146.08 138.17 118.25 670.16 234.59 302.78 40 I9 Intron 0 11.71 3.12 22.77 9.88 7.31 6.48 6.27 13.05 6.75 13.67 1.93 1.29 0.00 2.66 1.56 2.18 3.30 10.04 10.41 7.94 20.71 25.56 34.46 41 I9_SR1 SilentIntronRegion 0 11.76 3.13 22.86 9.92 7.34 6.50 6.29 13.09 6.77 13.72 1.94 1.30 0.00 2.67 1.56 2.19 3.31 10.08 10.45 7.97 20.78 25.66 34.60 42 ER10a ExonRegion 0 143.75 95.80 375.82 288.10 76.07 75.50 64.42 265.21 194.29 246.77 38.78 5.26 4.63 26.90 32.67 55.55 42.49 214.96 184.51 113.56 665.07 413.86 458.79 43 E10_Da NovelBoundary 0 44.01 9.47 44.47 33.50 6.62 10.33 14.26 23.78 4.37 13.03 0.00 0.00 0.00 0.00 0.00 0.00 4.77 27.86 30.31 8.12 35.15 23.64 29.19 44 E10a_E11a KnownJunction 0 163.88 151.16 502.94 349.17 142.11 86.94 106.79 347.98 294.15 343.62 66.07 0.00 32.79 21.48 54.76 113.30 68.26 233.88 282.46 136.08 859.51 440.64 617.77 45 I10 Intron 0 10.47 0.63 12.98 13.81 1.65 1.70 1.64 9.55 3.41 2.11 0.60 0.00 0.00 1.65 0.90 2.76 0.00 6.53 5.91 3.95 10.90 29.62 14.52 46 I10_AR1 ActiveIntronRegion 0 11.56 1.02 20.84 22.27 2.68 1.83 2.62 15.44 5.45 3.34 0.97 0.00 0.00 1.34 1.45 2.97 0.00 9.55 7.96 5.32 16.53 43.63 19.09 47 E11_Aa NovelBoundary 0 22.30 12.76 49.11 63.06 3.82 5.45 20.49 27.81 12.21 24.01 4.90 0.00 0.00 0.00 8.90 12.13 3.83 32.91 40.28 26.65 53.81 81.38 78.70 48 ER11a ExonRegion 0 142.01 113.80 478.72 369.16 111.94 83.65 73.04 348.46 233.98 303.58 58.33 4.15 11.37 46.23 39.07 65.79 57.29 211.98 360.12 150.80 885.71 782.32 631.38 49 E11a_E12a KnownJunction 0 238.86 153.46 485.23 390.83 84.38 47.53 92.21 429.39 238.63 346.73 100.29 12.30 6.33 35.73 57.61 77.33 93.69 183.97 293.56 149.95 1133.92 573.27 423.74 50 ER12a ExonRegion 0 178.69 114.87 458.20 390.92 87.32 52.65 50.88 343.09 239.57 307.08 47.13 3.74 3.25 26.67 46.35 54.49 55.21 236.46 186.22 154.23 820.65 577.49 424.18 51 E12_Ab KnownBoundary 0 160.03 126.23 643.89 471.17 156.96 96.02 79.05 491.94 313.10 345.77 39.22 0.00 22.89 24.60 39.93 53.32 58.72 262.07 276.15 223.97 985.29 592.80 442.44 52 ER12b ExonRegion 0 183.95 103.65 372.19 310.82 126.19 66.15 62.57 261.59 185.96 198.36 32.91 8.56 8.54 27.78 34.73 54.73 43.13 140.84 299.94 119.22 643.43 650.97 497.61 53 E12_Da KnownBoundary 0 93.94 81.24 199.11 182.49 65.28 56.44 56.13 181.88 142.74 165.95 22.43 24.91 6.82 26.37 10.38 7.86 17.02 34.16 155.49 91.47 355.22 473.89 214.69 54 ER12c ExonRegion 0 90.52 81.15 144.67 149.50 43.00 23.98 23.77 103.72 72.32 88.56 9.13 8.76 5.19 6.13 10.68 12.38 9.02 44.54 108.66 38.22 198.15 233.90 153.64