Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LGR4 Gene 0 13.54 28.89 9.70 17.46 8.80 13.65 16.04 10.48 14.94 13.84 42.86 62.63 14.10 67.98 50.77 16.36 57.43 25.85 22.12 21.43 13.00 74.52 28.87 2 418214 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.37 0.00 0.00 0.00 0.00 0.51 0.00 0.00 1.17 0.18 0.15 0.10 1.22 0.00 0.98 0.41 0.00 0.59 3 389858 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.72 0.00 0.00 0.00 2.21 0.00 0.00 0.00 0.00 7.35 0.00 1.58 4.52 0.00 0.00 3.12 0.00 4 379214 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 480977 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.77 0.00 0.00 0.00 0.00 1.42 2.99 0.62 0.00 0.00 0.00 0.00 0.00 6 459658 Transcript 0 0.47 1.04 0.13 0.00 0.00 0.54 0.39 0.19 0.00 0.50 0.57 1.06 0.28 2.02 0.94 0.44 2.90 1.55 0.93 1.56 1.61 2.44 0.86 7 489910 Transcript 0 1.36 2.21 1.00 0.00 0.25 0.34 1.96 1.82 1.52 0.32 3.22 7.30 1.43 5.42 5.38 0.28 7.91 2.32 2.28 2.26 2.89 13.00 1.85 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 2.53 0.00 0.00 4.62 0.89 0.00 0.51 2.42 0.00 4.91 2.03 0.00 2.94 9 E1_Ac KnownBoundary 1 0.00 6.18 0.00 3.03 3.40 13.63 12.54 1.81 1.39 3.20 61.65 0.00 0.00 136.03 31.89 45.80 145.96 99.90 51.67 41.35 34.53 40.41 50.11 10 ER1b ExonRegion 1 0.00 2.38 0.00 1.93 1.29 6.51 5.48 0.83 0.77 0.00 31.79 0.00 0.00 63.17 17.61 16.40 57.59 38.99 20.98 22.23 17.63 14.73 21.16 11 ER1c ExonRegion 0 0.25 0.56 0.00 0.59 0.23 1.67 2.33 0.25 1.58 3.37 15.65 2.19 0.00 27.42 7.78 8.08 31.41 18.97 5.74 5.14 10.56 8.37 15.02 12 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 6.58 2.30 1.79 1.45 7.58 0.00 0.00 9.77 0.00 3.25 22.53 10.11 0.00 2.56 7.78 5.88 3.59 13 ER1d ExonRegion 1 0.18 1.70 0.00 0.53 0.00 0.77 3.40 1.34 3.37 2.86 21.37 4.55 0.17 35.83 5.37 6.25 24.03 12.39 8.06 6.22 8.38 15.80 17.53 14 E1a_E2a KnownJunction 1 3.56 9.21 1.83 0.00 0.00 5.22 4.24 0.00 6.45 4.16 50.01 18.46 6.17 71.81 0.00 11.11 46.84 43.32 9.60 13.55 7.66 32.21 58.22 15 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.72 0.00 0.00 0.00 2.21 0.00 0.00 0.00 0.00 7.35 0.00 1.58 4.52 0.00 0.00 3.12 0.00 16 I1_AR5 ActiveIntronRegion 0 3.09 3.65 0.19 3.25 2.68 0.00 2.34 0.00 2.66 1.15 0.00 1.22 0.00 0.96 9.75 2.06 14.47 5.69 1.23 3.76 3.67 1.23 10.77 17 I1_AR6 ActiveIntronRegion 1 2.31 7.32 2.75 2.89 0.56 0.00 1.45 1.71 2.08 1.80 0.18 2.84 0.37 0.43 12.04 4.22 7.88 3.23 3.82 5.97 0.71 1.18 6.31 18 ER2a ExonRegion 1 5.70 8.16 0.00 1.08 1.90 9.96 6.82 2.38 9.90 5.94 54.26 12.39 2.87 103.38 9.07 22.54 72.39 57.79 12.43 21.10 17.78 56.52 51.84 19 E2a_E3a KnownJunction 1 7.56 5.39 0.00 3.16 0.00 11.36 18.37 3.98 13.89 6.90 86.71 11.55 6.98 114.31 21.39 25.21 96.31 88.54 27.29 26.78 37.87 76.48 53.01 20 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 0.00 4.27 8.98 0.00 0.00 0.00 0.00 0.00 0.00 21 ER3a ExonRegion 1 4.76 2.77 0.66 3.88 0.00 6.55 10.54 1.46 8.56 9.29 70.31 39.69 0.00 98.28 22.28 27.53 94.30 64.39 19.33 21.90 25.77 58.05 32.67 22 E3a_E4a KnownJunction 1 3.48 2.70 6.50 3.46 0.00 5.28 14.00 1.60 6.19 6.63 63.28 62.42 0.00 108.60 14.83 23.33 126.88 52.44 30.31 20.13 23.72 83.52 35.51 23 ER4a ExonRegion 1 1.65 4.72 1.60 3.56 0.00 9.27 12.60 1.63 17.84 5.67 62.09 39.81 1.56 100.81 22.00 25.76 103.61 62.44 20.57 24.47 32.17 63.52 53.06 24 E4a_E5a KnownJunction 1 3.78 9.54 2.87 5.39 0.00 5.11 18.59 2.55 24.22 7.20 83.97 30.61 12.99 120.37 27.57 25.38 95.37 55.67 13.74 20.26 49.73 74.52 72.90 25 E5_Aa NovelBoundary 0 0.00 6.05 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 2.32 6.30 0.00 2.47 0.00 0.00 0.00 0.00 4.42 0.00 8.22 2.94 0.00 26 ER5a ExonRegion 1 4.04 16.07 3.03 4.47 5.52 7.81 9.72 3.60 12.69 9.54 55.32 54.02 10.40 102.79 26.33 19.10 82.00 51.81 24.91 19.07 34.30 58.58 30.56 27 E5a_E6a KnownJunction 1 6.52 29.47 7.92 7.23 3.74 10.68 8.61 1.52 1.79 8.25 57.75 62.57 26.95 114.78 24.72 16.41 87.52 28.77 32.85 37.01 28.42 62.76 12.04 28 E5b_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER5b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 30 ER6a ExonRegion 1 3.50 20.96 7.28 4.22 1.60 16.40 16.26 3.00 4.70 8.60 50.66 54.42 24.62 102.55 28.05 18.49 65.97 38.75 27.65 29.46 11.51 63.23 23.98 31 E6a_E7a KnownJunction 0 10.67 32.49 4.08 2.93 11.12 5.00 11.92 10.56 7.58 8.92 42.27 45.91 32.95 51.80 18.54 7.35 57.04 24.46 34.82 26.40 2.47 73.42 12.38 32 ER7a ExonRegion 1 4.36 10.32 3.29 10.51 6.63 13.00 17.65 11.30 7.86 8.61 41.71 46.93 24.47 76.80 11.65 20.12 36.84 24.42 29.87 22.36 6.55 78.99 29.20 33 E7a_E8a KnownJunction 1 6.30 8.68 4.38 25.50 0.00 18.11 20.36 5.38 6.51 6.96 44.38 83.73 52.76 97.77 13.85 19.48 35.53 18.49 20.42 31.38 2.41 89.58 30.65 34 ER8a ExonRegion 1 3.91 21.83 5.16 16.88 6.95 17.01 22.51 10.08 9.21 8.67 41.48 78.83 32.31 108.05 29.50 16.02 53.69 21.15 20.26 27.87 10.31 78.25 27.90 35 E8a_E9a KnownJunction 1 6.59 26.71 5.29 5.29 18.85 18.68 22.21 14.21 12.21 10.10 52.91 51.92 28.73 97.59 20.27 16.24 79.57 16.46 28.24 27.61 16.68 104.77 39.01 36 ER9a ExonRegion 1 3.85 20.93 3.86 4.39 8.66 23.23 14.75 11.35 15.18 8.86 61.02 77.21 35.50 91.72 23.65 24.73 68.45 16.78 31.28 31.56 14.35 72.29 20.88 37 E9a_E10a KnownJunction 1 10.22 12.50 5.23 11.89 20.80 11.07 10.60 14.50 16.78 11.23 37.54 87.03 52.92 111.48 13.35 15.04 63.96 13.47 49.13 20.71 15.14 68.03 28.26 38 ER10a ExonRegion 1 9.48 26.91 1.60 9.74 7.56 3.96 11.69 9.82 18.08 16.67 58.38 75.17 20.32 92.86 23.17 4.95 86.78 25.20 26.36 27.94 25.52 57.92 33.28 39 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER11a ExonRegion 0 0.93 2.09 0.27 0.00 0.00 1.07 0.78 0.38 0.00 1.00 1.13 2.13 0.57 4.05 1.88 0.87 5.80 3.10 1.87 3.12 3.23 4.89 1.72 41 E11a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E12_Ab NovelBoundary 0 13.48 18.62 0.00 4.99 0.00 15.56 11.61 7.68 13.48 11.68 50.96 52.52 13.64 51.15 25.22 10.42 69.66 11.48 0.00 16.75 5.07 51.44 21.94 43 ER12a ExonRegion 1 11.96 25.42 0.37 5.45 0.00 7.70 12.25 8.99 19.21 13.42 73.35 90.05 44.32 92.33 32.06 9.81 107.94 27.53 9.87 19.89 15.21 54.48 28.93 44 ER12b ExonRegion 1 8.02 17.91 3.20 6.29 10.29 19.78 19.53 11.90 15.06 17.84 75.57 92.25 37.52 120.34 23.04 20.75 104.23 18.58 21.75 28.36 18.14 87.59 27.28 45 E12a_E13a KnownJunction 1 7.56 16.25 4.91 9.12 20.20 39.81 26.98 11.71 14.32 21.95 72.60 93.63 20.29 135.15 22.99 22.64 113.32 11.94 19.86 46.98 26.07 112.98 41.74 46 ER13a ExonRegion 1 8.53 12.79 4.20 12.39 16.54 28.40 20.16 8.01 12.63 17.41 69.91 113.88 18.69 98.48 28.49 18.06 112.38 18.87 27.51 35.46 10.68 88.27 38.13 47 E13a_E14a KnownJunction 1 13.85 5.53 7.33 14.52 0.00 12.72 27.95 6.78 10.36 18.94 72.81 105.33 25.97 90.18 21.26 19.14 107.99 21.18 26.82 19.56 3.15 88.67 50.62 48 ER14a ExonRegion 1 4.29 11.52 6.42 8.20 3.49 17.65 23.17 4.99 15.71 17.97 65.50 90.74 16.22 78.48 25.47 11.23 79.22 26.77 25.00 14.18 7.07 66.53 39.85 49 E14a_E15a KnownJunction 1 0.00 15.72 4.11 7.26 3.14 23.34 25.00 7.06 18.43 18.32 71.81 130.24 6.82 103.36 27.69 11.36 85.83 26.20 33.79 16.55 14.27 80.40 29.79 50 ER15a ExonRegion 1 0.00 28.56 2.09 9.48 7.51 23.57 14.76 5.26 15.45 20.30 54.29 108.70 28.04 107.61 32.72 23.14 111.81 24.65 36.26 29.29 10.69 95.49 49.67 51 E15a_E16a KnownJunction 0 0.00 43.81 0.00 17.75 14.09 5.39 20.27 8.67 10.62 18.75 54.86 107.89 13.15 55.86 14.59 16.15 77.89 16.54 45.65 28.06 26.75 111.32 42.94 52 ER15b ExonRegion 1 0.00 36.36 0.54 14.94 12.52 13.06 12.13 6.36 10.57 20.55 52.81 116.72 17.82 76.72 25.76 17.24 104.70 16.26 45.23 32.60 19.04 112.18 44.87 53 ER16a ExonRegion 1 10.85 35.02 6.76 16.14 7.14 20.20 25.03 8.23 15.68 15.22 63.69 101.02 14.33 101.35 30.92 15.38 107.70 38.07 36.73 27.78 23.12 86.38 48.20 54 E16_Da KnownBoundary 0 0.00 2.96 0.00 0.00 0.00 0.00 0.00 2.46 1.13 0.00 0.00 12.30 0.00 2.47 4.45 4.19 16.92 4.52 4.14 5.69 2.59 11.88 3.50 55 E16a_E17a KnownJunction 1 13.63 38.74 0.00 13.75 3.65 33.33 39.00 4.56 16.87 12.52 41.06 80.43 20.29 108.42 21.51 19.40 125.29 28.23 33.98 17.83 37.56 84.13 54.21 56 ER16b ExonRegion 0 1.36 2.21 1.00 0.00 0.25 0.34 1.96 1.82 1.52 0.32 3.22 7.30 1.43 5.42 5.38 0.28 7.91 2.32 2.28 2.26 2.89 13.00 1.85 57 E16_Db NovelBoundary 0 752.65 782.03 344.43 373.35 601.53 376.37 813.96 411.11 386.14 352.72 321.03 261.24 248.52 282.07 360.84 613.17 701.45 467.22 499.12 758.06 678.56 261.65 503.39 58 ER17a ExonRegion 1 11.22 29.43 3.70 19.79 6.48 14.94 23.10 4.05 19.26 11.91 54.84 92.04 16.78 101.42 32.76 19.63 93.28 30.07 33.69 28.36 22.00 99.33 41.85 59 E17a_E19a KnownJunction 0 23.86 47.23 6.21 21.18 4.16 26.92 6.54 2.55 33.74 2.34 64.33 37.36 13.31 130.44 47.35 22.30 111.08 50.74 35.67 39.76 42.69 124.79 64.45 60 E17b_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 ER17b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.74 0.00 1.85 0.00 0.00 0.00 0.00 0.00 62 E18a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER18a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 64 ER19a ExonRegion 1 6.63 34.45 6.80 21.38 2.74 10.33 18.58 8.56 26.20 10.05 90.48 61.02 11.06 112.70 37.37 14.15 123.04 37.59 34.13 42.76 19.18 106.63 50.13 65 E19a_E20a KnownJunction 1 6.82 36.70 7.78 27.17 7.64 13.06 19.39 14.21 22.51 15.77 86.50 100.83 13.15 128.26 41.91 20.08 129.03 38.18 39.62 34.58 13.34 138.76 35.68 66 I19_AR1 ActiveIntronRegion 0 0.00 2.03 0.00 0.25 0.00 0.00 3.97 1.73 3.48 0.00 8.79 8.66 4.69 9.15 0.00 0.00 9.60 5.54 3.19 5.03 2.20 8.33 2.94 67 I19_AR2 ActiveIntronRegion 0 2.71 1.22 0.56 0.62 0.00 1.05 2.74 1.00 1.51 0.78 6.88 7.93 1.41 10.70 3.93 3.18 13.01 6.67 4.49 4.08 1.91 9.16 2.03 68 I19_AR3 ActiveIntronRegion 0 0.91 4.36 0.62 2.13 0.80 0.31 1.12 1.17 1.74 1.08 0.98 16.27 6.64 6.61 3.14 1.32 2.71 0.94 3.78 3.75 0.37 16.64 0.00 69 E20_Aa NovelBoundary 0 12.22 0.00 0.00 0.00 4.33 0.00 0.00 2.09 3.04 0.00 7.53 15.30 20.45 12.54 0.00 4.27 17.67 4.06 8.28 11.38 6.18 27.74 0.00 70 ER20a ExonRegion 0 23.20 46.29 16.92 29.34 14.43 19.68 22.86 17.05 21.97 20.79 52.06 87.87 19.41 79.94 84.03 21.75 64.24 29.46 28.79 27.87 13.30 105.96 35.62