Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PRMT3 Gene 0 44.93 102.17 57.72 89.04 59.61 54.40 51.43 46.31 32.46 51.91 105.09 147.77 114.73 114.07 87.40 79.16 92.16 30.93 38.49 56.58 29.87 79.03 39.55 2 437750 Transcript 0 3.41 7.96 1.21 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.00 0.00 4.45 12.39 0.00 4.44 4.80 9.27 0.00 2.45 22.54 3 331079 Transcript 1 6.98 17.98 13.49 12.28 4.95 20.41 17.39 9.68 9.78 14.38 69.69 15.01 5.59 63.89 14.14 54.08 77.45 21.39 18.26 21.74 20.52 22.68 22.75 4 330796 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 3.08 4.78 0.77 0.00 3.24 7.80 5.73 2.48 1.74 3.58 13.15 2.05 1.61 18.44 12.17 17.76 18.96 2.25 1.90 5.13 13.26 5.58 12.06 6 E1a_E2a KnownJunction 0 7.19 9.27 5.26 3.30 0.00 29.64 13.96 9.12 4.40 5.26 42.80 12.60 0.00 26.43 8.90 29.56 69.85 7.92 20.89 3.13 25.33 23.76 25.78 7 E1a_E3a KnownJunction 0 3.48 2.57 0.00 0.00 0.00 0.00 4.20 2.55 1.59 1.67 0.00 0.00 0.00 2.47 0.00 7.09 15.33 0.00 0.00 0.00 2.97 0.00 0.00 8 ER2a ExonRegion 1 3.30 14.47 10.09 11.46 2.54 11.15 6.94 5.31 8.23 15.10 54.86 13.21 9.97 51.86 15.72 46.02 65.82 24.99 12.60 24.58 23.87 24.33 26.75 9 E2a_E3a KnownJunction 1 10.45 30.19 25.10 22.08 12.31 20.44 31.27 14.62 16.72 22.78 111.40 19.21 6.82 113.37 17.80 86.64 96.68 31.26 21.27 37.52 12.36 19.96 15.71 10 ER3a ExonRegion 0 11.55 27.42 22.56 27.91 22.66 51.13 36.40 29.97 16.49 38.04 84.67 52.89 53.91 102.12 76.52 115.98 82.64 41.54 38.99 49.96 26.98 63.03 23.39 11 E3a_E4a KnownJunction 0 14.89 43.94 21.85 28.23 34.21 54.06 40.23 34.01 20.92 29.63 80.18 122.74 92.53 72.05 24.48 68.19 80.13 24.08 3.67 45.32 30.77 56.95 3.76 12 E3a_E5a KnownJunction 0 3.41 7.96 1.21 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.00 0.00 4.45 12.39 0.00 4.44 4.80 9.27 0.00 2.45 22.54 13 ER4a ExonRegion 0 8.97 53.69 24.95 38.38 41.15 50.98 26.19 26.76 21.17 30.21 94.56 119.49 112.56 84.29 33.60 72.34 69.98 26.27 4.20 35.53 19.35 51.21 11.92 14 E4a_E5a KnownJunction 1 20.08 87.42 22.83 37.59 46.35 73.48 27.56 24.81 18.63 37.04 113.82 90.78 123.04 106.60 24.11 119.20 59.65 23.92 9.60 37.58 5.87 72.19 35.25 15 ER5a ExonRegion 0 18.64 80.67 26.20 42.91 25.61 58.88 42.37 33.38 22.82 45.76 113.76 165.53 109.97 129.13 54.45 80.19 104.64 26.44 24.06 56.99 18.72 80.10 41.00 16 E5a_E6a KnownJunction 0 26.45 131.36 27.17 60.37 40.83 55.42 68.89 32.98 25.81 45.37 103.66 195.51 140.41 144.98 70.21 66.39 102.38 17.66 32.75 77.02 43.80 81.26 35.68 17 ER6a ExonRegion 0 26.80 90.51 37.17 71.43 48.18 60.58 58.70 32.57 24.02 44.93 137.10 242.31 167.76 171.53 83.56 117.36 124.79 46.38 38.09 68.68 54.64 86.73 50.93 18 E6a_E7a KnownJunction 0 52.01 87.75 49.11 66.39 49.58 60.99 72.91 47.97 27.14 44.70 156.36 250.73 161.68 196.95 83.81 114.50 209.91 42.37 66.35 48.26 59.31 94.18 50.96 19 E6a_E8a NovelJunction 0 0.00 13.35 1.51 3.43 8.66 11.58 6.49 2.34 5.96 4.59 2.68 11.70 13.96 9.71 8.90 8.72 0.00 4.31 0.00 2.62 2.84 0.00 0.00 20 ER7a ExonRegion 0 36.68 86.94 47.32 75.88 64.09 63.08 61.32 36.18 32.04 47.52 179.81 226.83 154.84 182.58 86.36 133.85 176.31 55.23 58.85 80.12 67.46 83.77 54.42 21 E7_Da NovelBoundary 0 29.04 8.75 9.05 6.39 16.21 0.00 4.20 2.14 1.79 4.03 7.90 0.00 0.00 0.00 4.45 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 22 E7a_E8a KnownJunction 0 43.19 64.79 55.62 107.68 105.43 43.55 54.45 39.35 31.02 55.82 197.68 234.38 122.56 149.57 115.33 112.11 217.67 44.56 53.55 77.79 57.45 114.38 50.28 23 ER8a ExonRegion 0 31.72 76.78 29.93 62.73 58.79 47.32 59.36 26.66 24.59 53.64 175.51 182.43 186.82 146.93 93.98 102.18 178.25 38.49 39.82 72.18 40.23 79.74 46.05 24 E8_Da NovelBoundary 1 0.00 34.53 1.15 11.15 0.00 2.67 9.80 10.60 6.66 2.69 9.48 0.00 64.28 2.12 8.90 3.76 12.44 2.57 4.24 3.26 2.97 3.06 11.18 25 E8a_E9a KnownJunction 0 20.23 82.75 22.74 41.95 76.40 34.64 56.04 22.22 30.41 53.11 150.25 156.20 213.95 96.18 79.86 74.77 110.71 32.46 30.68 65.52 29.59 38.70 37.39 26 I8 Intron 1 3.64 11.06 3.44 12.76 9.41 4.84 9.14 9.62 6.24 8.33 6.16 21.23 42.06 10.09 7.53 6.97 9.73 1.53 2.45 7.75 2.18 5.76 3.12 27 I8_SR1 SilentIntronRegion 0 3.14 8.84 4.60 14.02 10.46 3.29 8.56 11.77 6.61 8.51 5.00 17.77 33.78 9.59 8.61 7.03 9.88 1.77 2.71 7.71 1.67 4.99 2.41 28 I8_AR1 ActiveIntronRegion 1 0.50 12.45 3.22 9.55 9.11 4.09 6.85 7.87 5.41 8.23 4.09 30.59 69.15 8.79 7.00 8.73 8.15 2.60 2.62 9.00 0.52 6.12 3.11 29 I8_SR2 SilentIntronRegion 0 6.67 15.24 1.02 11.95 7.31 8.73 11.87 5.95 5.93 8.02 10.02 23.50 44.63 12.04 5.49 5.83 10.41 0.39 1.79 7.15 4.32 7.30 4.73 30 ER9a ExonRegion 0 30.76 92.08 31.97 70.43 53.19 61.87 70.12 28.46 33.50 61.46 132.28 226.62 205.78 154.00 71.18 92.18 143.35 37.53 72.77 66.32 28.36 88.00 50.24 31 E9a_E10a KnownJunction 0 20.00 65.32 21.61 78.91 71.39 75.41 58.69 35.61 32.44 62.45 95.66 171.21 150.15 151.16 108.54 88.18 79.57 38.26 48.38 74.59 25.27 121.24 37.90 32 E9a_E11a NovelJunction 0 0.00 0.00 0.00 1.30 0.00 4.83 0.00 5.05 0.00 0.00 2.68 0.00 20.13 0.00 0.00 0.00 11.13 0.00 0.00 0.00 0.00 0.00 0.00 33 ER10a ExonRegion 0 48.26 70.30 36.15 72.19 77.28 52.63 82.34 36.47 40.29 50.75 128.89 208.98 215.37 165.86 88.08 79.77 115.86 30.16 61.06 69.64 23.80 103.78 48.45 34 E10a_E11a KnownJunction 0 29.12 53.08 39.21 102.58 53.06 50.43 65.71 44.20 46.06 53.89 100.34 198.66 140.09 130.97 59.58 61.86 119.49 39.75 87.53 111.41 24.71 90.44 31.16 35 ER11a ExonRegion 0 42.25 92.08 48.58 101.80 62.19 65.71 57.68 38.79 38.24 53.57 111.06 258.18 156.91 136.67 72.57 90.33 118.54 39.36 51.37 80.29 44.07 101.27 54.46 36 E11a_E12a KnownJunction 0 50.01 160.96 117.62 91.70 60.78 56.10 73.62 31.26 35.94 49.00 135.03 241.73 231.32 227.38 105.20 86.56 176.44 42.49 39.06 69.22 64.43 132.20 74.18 37 ER12a ExonRegion 0 43.86 193.34 78.37 94.93 57.53 42.13 69.82 41.80 35.21 50.57 145.60 243.99 206.36 147.69 82.32 85.39 139.15 34.31 50.83 75.24 48.97 99.45 47.49 38 E12a_E13a KnownJunction 0 47.49 306.92 72.97 115.97 82.00 62.35 79.89 51.88 46.09 57.99 144.83 300.85 238.62 171.94 151.18 153.63 88.92 45.23 43.67 86.99 25.51 93.87 83.23 39 ER13a ExonRegion 0 73.83 182.25 76.94 134.22 80.30 69.71 73.27 54.71 30.72 59.01 130.19 208.76 225.61 161.96 113.28 107.61 101.46 30.31 56.24 70.80 42.68 86.19 72.37 40 E13a_E14a KnownJunction 0 113.21 94.79 73.18 132.12 73.43 42.53 84.57 58.00 17.79 53.13 128.14 266.49 105.03 168.58 178.13 140.39 109.77 45.43 71.91 95.62 56.40 97.12 62.57 41 ER14a ExonRegion 1 75.45 181.91 78.16 148.45 53.46 48.87 68.87 60.36 30.90 59.50 94.64 212.74 193.49 159.39 130.10 139.46 105.37 49.74 58.15 89.49 49.35 88.04 67.25 42 E14a_E15a KnownJunction 1 116.76 336.12 73.77 172.54 69.27 87.96 69.29 55.66 36.66 68.01 106.66 270.69 284.88 191.89 162.43 181.66 105.94 43.94 70.21 113.33 59.74 109.42 88.95 43 ER15a ExonRegion 0 83.84 272.73 77.50 128.96 56.07 67.93 64.05 53.50 34.22 57.07 131.96 132.10 171.51 165.05 100.82 100.11 124.61 34.88 37.10 95.89 41.67 81.42 55.90 44 E15_Da NovelBoundary 1 3.70 12.76 4.91 11.69 24.79 8.92 6.76 0.00 5.30 0.00 4.32 43.51 121.10 17.01 4.45 28.20 13.37 7.25 9.60 20.52 5.13 0.00 22.96 45 E15a_E16a KnownJunction 0 55.27 281.66 96.42 110.78 58.49 75.41 74.90 52.21 35.85 63.85 163.36 130.84 54.05 189.12 83.57 86.81 141.75 37.10 23.34 55.54 41.70 63.38 35.77 46 I15 Intron 0 6.44 7.84 3.74 11.44 8.75 5.40 8.06 5.08 5.41 4.77 8.47 26.33 27.77 13.38 6.76 10.56 10.50 2.45 3.05 8.03 1.72 7.47 3.12 47 I15_SR1 SilentIntronRegion 0 2.93 5.04 1.44 6.30 3.96 3.92 7.09 2.27 3.39 2.11 7.72 22.90 23.94 12.67 4.80 9.89 11.49 2.14 2.53 7.82 1.79 5.66 3.35 48 I15_AR1 ActiveIntronRegion 0 4.09 5.91 1.63 7.95 9.90 6.75 6.78 5.33 7.41 7.78 6.84 41.89 40.74 13.96 4.79 11.04 7.74 1.24 2.38 7.59 0.24 9.73 3.46 49 I15_SR2 SilentIntronRegion 1 3.02 3.97 3.53 3.80 1.59 1.27 3.06 2.96 2.12 4.12 0.83 3.20 32.27 1.78 6.29 0.57 3.38 0.79 0.00 3.09 0.21 2.58 0.00 50 I15_AR3 ActiveIntronRegion 0 7.68 11.96 4.36 19.24 13.92 7.00 8.64 7.28 8.47 8.03 7.36 26.43 33.72 11.98 8.68 10.95 3.84 1.93 2.89 7.63 1.18 8.93 1.88 51 I15_SR3 SilentIntronRegion 0 19.41 16.08 12.55 26.37 22.07 9.13 11.92 13.58 9.69 10.65 13.02 32.15 31.11 17.11 13.40 12.89 13.18 4.55 5.47 9.47 2.59 12.10 3.11 52 E16_Aa NovelBoundary 0 19.63 28.15 53.16 46.78 35.23 8.12 13.82 12.65 21.82 26.51 16.95 0.00 0.00 18.13 14.96 10.60 17.39 4.02 0.00 19.56 6.30 8.51 3.76 53 ER16a ExonRegion 0 66.87 116.26 89.50 130.59 87.27 68.02 55.69 73.12 45.97 70.44 97.55 130.95 83.63 96.89 120.52 69.45 67.91 28.86 38.94 54.53 19.75 94.28 35.70 54 IG38_SR1 SilentIntergenicRegion 0 7.96 10.31 6.28 10.24 15.28 14.42 14.22 4.80 5.76 7.16 8.08 10.12 8.47 8.53 6.40 7.70 4.11 4.89 5.15 10.54 2.67 7.52 3.40 55 IG38_AR1 ActiveIntergenicRegion 0 10.61 12.75 12.12 14.52 14.01 17.18 9.06 10.10 4.83 10.10 8.58 15.12 13.24 9.06 10.60 3.79 9.08 3.04 4.55 13.90 3.02 6.95 4.78