Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IGSF22 Gene 0 0.93 1.49 5.30 3.38 2.56 5.67 1.71 5.04 14.91 5.61 0.00 0.05 0.00 0.00 0.07 0.03 0.30 2.74 1.68 3.57 0.97 1.62 0.83 2 319338 Transcript 0 1.06 1.51 4.88 3.16 2.73 4.34 1.67 5.50 12.42 6.32 0.00 0.07 0.00 0.00 0.04 0.13 1.20 2.14 1.52 2.42 0.69 1.48 0.70 3 412229 Transcript 0 0.47 0.54 2.29 1.58 0.69 3.30 1.97 2.49 9.96 3.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.30 0.78 1.85 0.00 1.24 0.24 4 ER1a ExonRegion 0 0.00 1.22 1.15 0.03 0.00 0.00 1.06 1.45 1.58 1.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.44 0.00 0.00 0.00 0.00 5 E1_Ab KnownBoundary 0 0.00 3.35 1.80 0.00 0.00 0.00 1.94 2.55 3.41 2.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 9.60 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 0.00 0.51 1.27 0.96 0.00 0.00 0.77 0.57 3.07 0.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.26 1.46 1.01 0.00 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.92 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 2.11 1.26 0.77 0.00 1.98 0.69 0.91 5.87 1.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.02 1.12 0.76 0.79 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 7.81 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 0.79 0.71 1.53 0.00 2.10 0.79 1.00 6.01 1.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.78 0.02 1.64 0.00 0.00 0.00 11 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 12 ER4a ExonRegion 0 0.00 0.76 2.04 2.28 0.00 2.07 1.56 2.88 6.82 1.85 0.00 0.00 0.00 0.00 1.52 0.00 0.00 1.98 4.72 1.58 0.00 0.20 0.00 13 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.69 0.00 14 ER5a ExonRegion 0 0.00 1.04 1.45 1.02 0.00 3.69 1.92 0.99 10.10 1.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.40 1.62 0.00 0.00 0.79 0.00 15 E5a_E6a KnownJunction 0 0.00 0.00 2.84 0.00 0.00 2.90 0.00 4.72 13.57 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER6a ExonRegion 0 0.00 0.00 1.04 0.75 0.00 8.53 0.00 3.46 15.62 4.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.79 0.00 0.00 0.00 0.00 0.00 17 E6a_E7a KnownJunction 0 0.00 0.00 0.00 1.76 0.00 0.00 0.00 0.00 11.49 4.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 0.00 18 ER7a ExonRegion 0 0.00 1.17 3.91 2.74 0.77 2.32 2.10 2.78 17.11 2.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 2.74 1.79 0.63 2.36 0.84 19 E7a_E8a KnownJunction 0 0.00 0.00 2.93 0.00 0.00 0.00 2.25 2.55 16.90 2.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER8a ExonRegion 0 0.00 0.95 2.09 1.86 0.00 7.38 2.04 2.80 11.95 2.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 2.85 2.87 1.97 2.58 0.00 21 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.76 0.00 22 ER9a ExonRegion 0 0.00 1.25 1.13 0.63 0.00 2.30 0.41 1.97 6.55 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.36 0.00 0.18 0.00 23 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.94 3.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER10a ExonRegion 0 0.00 1.14 1.36 1.88 3.00 6.86 1.14 4.23 13.03 2.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.72 1.19 4.37 0.41 3.58 1.10 25 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 4.15 2.01 4.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER11a ExonRegion 0 0.00 0.36 3.95 2.18 0.96 7.21 0.80 3.58 14.93 3.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.21 1.14 3.05 1.58 1.05 1.58 27 E11a_E12a KnownJunction 0 0.00 0.00 3.55 0.00 0.00 0.00 0.00 0.00 4.48 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 0.00 28 ER12a ExonRegion 0 0.00 1.66 2.18 1.66 0.00 0.57 1.08 0.00 7.91 0.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.33 1.30 0.53 0.00 0.00 0.00 29 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 0.00 12.96 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 30 ER13a ExonRegion 0 0.00 0.00 0.66 1.46 0.00 1.47 0.15 0.00 10.87 2.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.98 1.14 1.06 0.79 0.90 0.00 31 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 5.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 32 ER14a ExonRegion 0 0.00 0.00 3.47 2.44 0.46 2.38 0.16 1.32 7.94 2.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 3.65 0.00 0.29 0.50 33 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 6.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 0.00 34 E14a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER15a ExonRegion 0 0.36 0.34 2.91 2.05 1.80 2.16 1.34 3.42 12.11 4.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.94 0.00 1.83 0.00 1.40 0.99 36 E15a_E16a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 1.60 11.78 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 37 ER16a ExonRegion 0 0.62 1.67 3.82 5.11 0.78 3.74 0.39 0.75 16.05 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.12 0.00 4.30 0.00 1.83 0.12 38 E16_Da KnownBoundary 0 0.00 2.70 0.00 3.36 0.00 2.73 0.00 2.55 6.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 3.24 39 E16a_E16b KnownJunction 0 0.00 0.00 4.23 1.37 0.00 0.00 0.00 2.26 15.08 4.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER16b ExonRegion 0 0.54 1.14 1.21 3.99 0.00 3.80 0.68 0.97 8.32 0.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.33 0.00 2.40 0.00 0.00 0.66 41 E16_Ab KnownBoundary 0 0.00 0.00 1.60 3.00 0.00 7.38 0.00 0.00 6.19 1.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 42 ER16c ExonRegion 0 0.00 1.62 9.31 3.91 6.15 3.67 1.06 0.69 15.50 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.83 0.00 1.35 0.88 1.32 1.15 43 E16b_E17a KnownJunction 0 0.00 0.00 16.14 0.00 7.72 4.54 0.00 0.00 12.47 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 44 ER17a ExonRegion 0 0.73 0.00 8.84 2.11 0.59 3.57 2.75 2.39 17.85 7.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 2.73 1.66 1.51 1.60 0.00 45 E17a_E18a KnownJunction 0 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 8.88 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 6.12 0.00 46 E17a_E19a KnownJunction 0 0.00 0.00 5.50 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E18_Aa NovelBoundary 0 7.11 6.71 27.29 10.82 15.62 53.78 5.92 49.41 36.89 18.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.64 0.00 15.47 2.35 5.51 4.27 48 ER18a ExonRegion 0 2.43 2.33 5.41 3.49 3.04 12.03 5.18 11.42 20.97 8.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 5.48 5.43 0.00 1.12 0.00 49 E18_Da NovelBoundary 0 38.38 11.58 22.03 17.65 12.14 12.44 5.74 38.40 36.81 15.85 0.00 0.00 0.00 2.12 0.00 0.00 0.00 9.04 4.80 10.35 3.09 0.00 0.00 50 E18a_E19a KnownJunction 0 0.00 0.00 3.08 1.50 0.00 5.11 6.58 0.00 6.08 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 0.00 0.00 51 E19_Aa NovelBoundary 0 21.19 0.00 26.61 10.52 3.65 20.90 0.00 21.97 20.98 24.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.75 0.00 18.60 2.72 0.00 7.17 52 ER19a ExonRegion 0 3.90 1.61 17.24 8.98 14.82 21.75 3.88 15.13 30.25 22.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.98 2.53 10.16 3.59 4.87 1.55 53 E19_Da NovelBoundary 0 7.56 6.12 16.47 6.36 12.14 5.74 6.62 30.48 20.08 26.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.33 0.00 0.00 0.00 0.00 0.00 54 E19a_E20a KnownJunction 0 0.00 0.00 6.89 5.33 0.00 2.78 0.00 2.42 18.23 2.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.39 0.00 0.00 0.00 2.45 0.00 55 I19 Intron 0 3.49 3.83 8.82 9.81 9.45 17.93 4.05 23.97 18.65 16.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.87 1.88 5.51 2.60 3.19 1.73 56 I19_SR1 SilentIntronRegion 0 4.59 3.12 10.90 13.08 13.55 20.57 4.95 31.79 22.14 22.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.75 1.15 6.21 2.79 4.25 1.45 57 E20_Aa NovelBoundary 0 0.00 12.43 26.11 5.09 14.35 10.56 3.40 17.46 31.19 14.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.60 0.00 6.46 9.45 3.12 0.00 58 ER20a ExonRegion 0 4.78 7.69 18.22 12.87 8.18 13.44 5.98 15.52 38.65 13.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.31 4.57 10.76 4.27 5.17 2.60 59 E20_Da KnownBoundary 0 14.52 8.42 30.40 20.71 33.19 10.16 14.09 27.40 46.06 19.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.14 7.62 11.70 8.34 2.69 0.00 60 ER20b ExonRegion 0 6.30 9.13 13.45 13.18 19.97 22.61 10.24 14.88 32.81 17.90 0.00 0.00 0.00 0.00 0.00 1.19 3.90 13.53 6.57 7.49 3.78 3.99 3.54 61 E20_Db NovelBoundary 0 7.19 33.02 16.82 18.08 12.05 4.83 6.54 15.12 32.41 28.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.55 4.52 14.25 5.19 6.25 0.00 62 E20b_E21a KnownJunction 0 0.00 0.00 2.99 2.06 0.00 0.00 2.25 5.01 12.44 5.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.69 0.00 63 I20 Intron 0 1.80 3.74 7.88 3.02 7.19 18.81 4.21 10.75 14.32 12.33 0.00 0.00 0.00 0.00 0.00 0.21 0.70 5.78 6.99 5.42 2.49 1.47 1.04 64 I20_AR1 ActiveIntronRegion 0 2.01 5.03 9.79 3.81 9.58 23.70 5.42 12.49 17.34 14.71 0.00 0.00 0.00 0.00 0.00 0.28 0.63 6.64 9.30 6.07 3.15 1.98 1.40 65 E21_Aa NovelBoundary 0 3.33 0.00 11.00 1.96 0.00 2.84 0.00 18.48 12.09 17.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.21 0.00 18.02 2.47 0.00 0.00 66 ER21a ExonRegion 0 3.26 2.83 13.85 4.90 4.56 9.95 1.52 20.84 28.80 17.04 0.00 0.67 0.00 0.00 0.32 0.00 1.95 5.11 2.95 10.34 2.38 3.21 2.72 67 E21_Da NovelBoundary 0 0.00 0.00 17.83 1.76 0.00 9.77 0.00 32.00 18.34 28.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 0.00 7.86 2.59 2.88 0.00 68 E21a_E22a KnownJunction 0 0.00 0.00 1.77 5.23 0.00 2.44 0.00 2.55 10.56 7.95 0.00 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 3.26 0.00 0.00 0.00 69 I21 Intron 0 10.12 3.83 9.13 3.97 13.76 20.99 6.81 19.59 21.87 13.62 0.00 0.63 0.00 0.19 0.45 0.00 0.00 1.66 1.85 7.71 2.24 4.08 5.96 70 I21_SR1 SilentIntronRegion 0 4.63 0.38 6.27 1.19 1.59 11.48 2.03 9.74 15.43 10.59 0.00 0.00 0.00 0.00 1.47 0.00 0.00 2.41 0.00 9.25 1.66 4.08 2.98 71 I21_AR1 ActiveIntronRegion 0 10.73 4.21 9.46 4.28 15.11 22.06 7.34 20.70 22.60 13.97 0.00 0.70 0.00 0.22 0.33 0.00 0.00 1.59 2.05 7.55 2.30 4.08 6.29 72 E22_Aa NovelBoundary 0 10.30 11.05 12.95 8.49 23.51 31.74 6.62 47.48 31.68 24.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 9.20 11.74 11.02 4.35 73 ER22a ExonRegion 0 0.00 0.44 1.02 1.71 0.00 1.20 0.00 2.50 5.70 3.27 0.00 0.00 0.00 0.00 0.00 0.00 0.89 0.60 0.69 0.73 0.00 0.45 0.00