Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	TCP11L1	Gene	0	30.58	61.85	62.87	85.57	68.65	144.47	79.10	109.09	239.24	176.05	39.58	48.34	57.88	51.48	53.61	44.37	59.25	123.15	72.29	117.27	55.39	58.27	51.58
2	334274	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	324357	Transcript	0	0.74	6.32	0.59	5.53	1.54	10.40	9.44	3.68	6.34	3.92	0.22	1.65	0.90	0.91	0.24	0.34	0.77	1.07	1.46	3.39	0.00	0.72	1.02
4	432887	Transcript	0	2.88	1.35	0.49	3.39	7.32	18.10	4.74	4.55	10.61	8.12	1.54	0.47	1.29	4.52	2.49	4.85	0.88	2.93	3.38	4.72	13.41	4.91	8.51
5	ER1a	ExonRegion	0	4.94	11.62	3.78	3.46	10.45	28.93	14.70	10.06	18.85	15.82	9.26	0.32	2.68	9.27	7.35	5.29	10.32	18.73	9.56	24.68	7.35	3.92	11.13
6	E1a_E3a	KnownJunction	0	34.60	63.15	34.09	30.17	53.57	111.47	53.75	52.74	133.59	81.28	65.44	12.60	25.49	44.85	17.80	46.06	96.21	97.83	106.36	108.98	56.90	49.78	53.44
7	E2_Aa	NovelBoundary	0	13.48	8.62	0.00	1.86	3.90	32.88	26.54	5.75	9.06	3.73	5.05	0.00	0.00	7.12	13.35	8.12	0.00	8.75	4.24	5.75	5.93	0.00	27.83
8	ER2a	ExonRegion	0	2.43	2.70	0.97	2.65	11.25	33.29	9.49	4.26	7.41	5.81	3.08	0.95	2.59	3.92	4.97	5.77	1.75	5.85	6.77	3.62	15.52	3.94	13.43
9	E2_Da	NovelBoundary	0	3.33	2.63	3.58	3.26	0.00	2.50	0.00	6.53	14.03	10.42	0.00	18.76	0.00	7.24	4.45	4.36	0.00	6.80	0.00	8.50	19.58	8.08	11.69
10	E2a_E3a	KnownJunction	0	3.33	0.00	0.00	4.13	3.40	2.90	0.00	4.85	13.80	10.42	0.00	0.00	0.00	5.12	0.00	3.93	0.00	0.00	0.00	5.82	11.31	5.88	3.59
11	I2_AR2	ActiveIntronRegion	0	11.89	8.38	6.13	14.22	10.21	10.85	12.34	7.45	15.92	10.87	2.66	8.75	18.84	3.81	3.31	3.56	3.02	5.57	1.91	6.17	2.67	3.18	4.04
12	E3_Aa	NovelBoundary	1	7.19	3.35	3.08	3.16	18.51	8.69	21.42	10.88	14.50	6.85	0.00	56.72	20.94	9.83	8.90	8.37	8.23	3.94	0.00	4.92	0.00	8.51	12.46
13	ER3a	ExonRegion	0	31.06	58.39	53.20	67.52	61.26	143.10	89.07	108.96	202.37	156.50	68.10	49.50	70.58	63.27	52.92	59.47	80.60	131.60	81.01	135.15	67.76	59.92	51.92
14	E3a_E4a	KnownJunction	0	49.34	74.26	47.57	99.85	27.50	139.92	63.82	135.50	232.52	207.19	43.43	95.28	78.40	68.57	71.82	66.91	55.73	147.78	159.91	156.41	82.16	73.73	47.04
15	ER4a	ExonRegion	0	29.22	66.85	60.26	80.91	84.52	165.75	89.90	158.42	264.37	220.42	49.91	99.81	92.00	71.68	59.97	54.93	68.65	130.61	103.34	172.21	67.52	81.73	42.99
16	E4_Da	NovelBoundary	0	15.63	3.03	6.45	10.89	16.47	2.27	12.45	7.93	7.84	1.67	0.00	6.30	13.15	0.00	0.00	0.00	4.77	1.95	4.61	0.00	0.00	0.00	0.00
17	E4a_E5a	KnownJunction	1	43.42	96.50	73.95	79.21	181.07	206.07	133.95	173.25	255.70	259.08	64.44	173.91	139.76	86.06	94.32	67.08	77.51	87.18	78.31	206.52	65.85	77.58	58.73
18	ER5a	ExonRegion	0	37.78	106.82	54.67	104.24	86.71	180.62	121.19	156.35	302.81	241.90	70.70	137.97	114.27	75.89	73.30	69.32	87.51	149.24	153.82	195.25	69.23	78.23	65.53
19	E5a_E6a	KnownJunction	0	44.90	81.04	57.89	84.27	82.85	142.02	154.57	120.59	275.87	211.40	64.70	123.64	118.82	71.99	29.17	68.19	86.30	68.94	108.24	177.37	48.43	86.28	49.60
20	ER6a	ExonRegion	0	42.81	103.84	59.54	99.47	102.45	197.19	116.87	150.95	307.66	237.88	78.38	135.37	126.40	83.23	68.26	69.82	108.97	126.68	105.02	175.46	87.05	83.94	68.88
21	E6a_E7a	KnownJunction	0	44.01	84.39	100.59	118.87	81.66	185.92	125.25	156.16	362.50	273.32	91.71	154.70	125.32	108.01	80.23	77.67	130.06	164.86	122.73	162.22	66.23	138.33	110.37
22	E7_Aa	NovelBoundary	0	16.74	12.10	7.36	18.35	36.25	54.34	35.24	2.09	10.50	22.62	2.00	0.00	19.32	0.00	0.00	20.51	13.93	14.01	0.00	9.40	0.00	6.06	0.00
23	ER7a	ExonRegion	0	41.91	89.27	85.33	107.52	82.67	191.32	110.34	142.59	312.87	216.30	66.38	114.97	77.30	82.37	91.02	66.49	102.42	186.73	90.68	175.29	72.27	78.88	84.84
24	E7_Da	NovelBoundary	0	3.56	9.08	7.98	10.72	23.68	2.67	13.73	10.97	5.30	12.25	2.68	5.85	37.50	0.00	0.00	4.27	16.08	0.00	0.00	2.49	0.00	4.90	6.32
25	E7a_E8a	KnownJunction	0	38.90	112.41	115.22	127.99	127.76	235.21	66.77	130.57	340.94	216.35	52.91	56.87	73.86	77.93	67.00	67.85	70.03	173.36	60.43	188.62	106.69	117.94	67.78
26	E7a_E9a	NovelJunction	0	0.00	0.00	3.73	6.69	14.94	11.58	2.25	3.94	3.24	9.21	5.32	0.00	6.33	4.59	0.00	22.81	3.65	7.83	9.41	0.00	0.00	2.94	0.00
27	I7_AR1	ActiveIntronRegion	0	4.82	7.77	7.99	16.21	10.65	10.50	15.57	9.70	10.75	12.86	1.62	7.08	15.17	2.51	3.46	6.96	4.32	6.96	4.61	10.49	1.40	5.20	6.20
28	ER8a	ExonRegion	0	40.76	74.70	97.61	83.89	79.66	145.90	77.81	114.03	280.35	197.38	51.54	58.50	51.11	77.41	93.09	60.11	81.57	181.53	89.34	154.62	102.41	74.22	73.21
29	E8a_E9a	KnownJunction	0	48.90	53.02	107.30	91.03	55.69	122.77	55.87	120.92	272.48	212.40	54.91	18.01	6.17	84.23	108.17	77.93	81.63	196.16	100.24	151.87	127.01	79.85	62.40
30	ER9a	ExonRegion	0	36.42	65.38	90.94	87.61	52.96	149.94	69.95	118.79	276.41	227.64	61.86	30.14	46.51	81.23	97.21	67.43	86.69	234.85	95.54	151.29	98.28	63.47	73.37
31	E9a_E10a	KnownJunction	0	26.67	61.04	113.39	106.71	76.15	184.61	107.58	128.93	284.84	279.02	67.23	29.71	86.52	107.95	143.89	53.83	73.96	215.68	144.10	173.34	125.53	64.79	71.79
32	E10_Aa	NovelBoundary	0	3.48	15.59	19.22	13.48	3.31	15.22	8.48	7.35	12.01	6.88	2.47	5.40	0.00	4.94	0.00	3.67	9.54	11.44	0.00	18.15	6.12	6.18	0.00
33	ER10a	ExonRegion	0	31.75	39.71	80.39	96.75	48.47	116.08	59.48	113.69	288.25	222.58	62.55	30.46	44.54	72.39	82.69	66.62	79.60	225.04	89.47	146.84	99.00	62.51	60.09
34	E10a_E11a	KnownJunction	1	105.80	62.69	155.41	174.54	71.05	191.25	102.24	146.92	486.45	316.89	102.97	32.56	13.47	138.74	136.84	132.96	150.35	314.38	206.69	215.66	131.28	83.52	138.37
35	E11_Aa	NovelBoundary	0	3.78	2.57	4.91	26.74	0.00	8.97	12.76	7.89	13.05	6.85	2.21	0.00	0.00	0.00	0.00	8.72	8.79	14.88	28.52	14.06	0.00	2.94	4.18
36	ER11a	ExonRegion	0	50.24	79.39	104.18	127.69	85.91	166.56	107.43	136.81	412.97	286.13	68.26	33.75	44.63	76.85	90.10	73.74	106.62	223.63	117.96	181.16	95.25	84.27	70.46
37	E11_Da	KnownBoundary	0	99.13	90.77	175.25	205.40	201.19	290.34	241.04	197.11	493.43	398.07	63.75	37.81	68.99	79.58	138.20	159.53	133.71	250.59	224.19	253.05	91.55	134.65	129.84
38	E11a_E12a	KnownJunction	0	0.00	3.29	1.36	1.86	0.00	10.22	9.58	4.44	2.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.00	0.00	0.00	0.00
39	ER11b	ExonRegion	0	43.19	88.47	95.89	145.70	112.91	228.61	118.71	166.53	358.10	252.77	29.87	49.18	84.04	52.87	56.83	46.65	57.88	137.60	85.13	136.35	49.46	83.63	67.51
40	E11_Db	NovelBoundary	1	6.96	86.43	64.43	134.08	168.17	154.68	73.80	120.76	215.94	173.74	4.74	31.21	20.13	18.60	31.28	20.68	34.88	28.48	34.54	93.96	8.46	104.16	8.19
41	I11	Intron	0	10.46	50.47	32.06	63.01	61.82	122.66	56.64	54.18	128.97	90.44	9.75	21.53	25.01	24.30	22.27	18.14	21.65	41.32	36.96	58.71	14.78	33.11	25.48
42	I11_SR1	SilentIntronRegion	0	7.50	38.95	20.64	56.18	54.10	93.23	46.69	39.83	89.37	79.90	6.64	21.03	17.86	20.06	23.83	15.09	23.78	25.39	33.45	50.26	8.64	19.46	21.29
43	I11_AR1	ActiveIntronRegion	0	12.30	73.50	51.95	95.33	74.30	160.42	78.92	84.59	217.85	137.84	16.29	27.51	29.61	30.73	26.05	25.79	23.37	65.07	43.33	92.41	20.30	50.59	28.43
44	I11_SR2	SilentIntronRegion	0	14.20	43.67	28.59	40.43	70.63	135.37	51.53	44.94	90.99	57.73	6.49	16.86	31.78	25.47	16.83	15.96	19.94	41.35	39.90	31.89	19.22	36.82	33.50
45	I11_AR2	ActiveIntronRegion	0	4.07	13.66	0.00	0.00	0.00	36.88	6.37	0.00	0.00	0.00	3.68	6.86	18.05	8.64	10.40	0.00	3.18	1.78	9.20	16.38	4.24	2.00	2.83
46	I11	Intron	0	4.07	13.07	9.10	34.28	21.70	25.45	26.40	25.38	50.64	27.72	1.51	8.15	8.63	1.61	3.47	2.86	2.97	7.96	5.74	15.09	0.79	4.88	2.47
47	I11_SR1	SilentIntronRegion	0	2.52	8.54	11.38	25.40	15.55	18.06	20.44	18.07	46.90	23.99	1.54	6.03	5.59	1.28	2.41	3.55	0.99	9.40	5.70	12.27	1.10	4.22	2.63
48	I11_AR1	ActiveIntronRegion	0	6.47	20.10	5.66	48.14	31.28	36.95	35.72	36.74	56.68	33.61	1.48	11.47	13.37	2.13	5.11	1.82	6.04	5.79	5.84	19.50	0.34	5.93	2.24
49	E12_Aa	NovelBoundary	0	17.78	21.71	8.90	61.26	17.49	20.84	20.05	48.18	87.61	58.56	0.00	7.65	0.00	2.12	0.00	0.00	3.46	0.00	0.00	18.98	2.41	4.71	0.00
50	ER12a	ExonRegion	0	2.94	21.98	1.01	20.20	6.18	31.39	25.24	10.26	22.65	15.69	0.90	6.53	3.58	3.63	0.95	1.38	3.06	4.27	5.85	10.56	0.00	2.90	4.08
51	E12_Da	NovelBoundary	0	13.93	26.84	18.33	73.65	58.23	65.76	62.67	36.15	85.42	43.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.57	16.38	13.74	0.00	5.76	11.95
52	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	I12	Intron	0	10.48	29.71	10.41	47.85	23.84	31.11	26.33	33.69	58.51	30.94	1.31	6.33	10.13	2.34	4.10	1.91	2.59	4.66	6.13	11.91	0.79	4.60	1.88
54	I12_AR1	ActiveIntronRegion	0	5.64	24.25	6.76	50.95	33.55	42.24	45.45	34.43	78.33	37.25	1.99	6.49	17.64	4.68	2.46	1.22	2.04	4.73	7.19	14.88	1.81	6.86	4.82
55	I12_AR2	ActiveIntronRegion	0	21.06	58.62	19.00	74.97	31.93	42.30	28.62	56.66	84.51	49.92	1.28	9.30	14.13	2.95	6.87	2.72	3.11	7.12	7.97	17.32	0.63	6.73	1.95
56	I12_SR3	SilentIntronRegion	0	4.77	8.03	6.95	36.17	22.81	21.96	29.86	25.13	44.35	18.15	1.46	5.16	3.95	0.73	3.75	1.12	3.57	2.81	3.60	9.77	0.76	1.96	1.11
57	I12_AR4	ActiveIntronRegion	0	5.34	10.29	3.48	31.18	13.11	15.18	9.45	14.50	26.04	12.58	0.98	6.73	6.97	0.74	1.15	1.50	2.09	2.23	0.00	3.83	0.17	0.00	0.00
58	E13_Aa	NovelBoundary	0	232.78	231.87	159.43	174.97	288.20	158.77	183.94	166.14	146.12	258.84	201.26	192.96	173.20	228.38	345.63	143.30	199.72	84.36	69.55	177.69	97.36	69.99	27.66
59	ER13a	ExonRegion	0	0.00	0.02	0.00	0.05	0.00	0.00	1.11	0.02	0.01	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00