Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 USP47 Gene 0 110.82 150.18 69.12 128.78 133.74 135.43 121.03 125.31 158.19 174.67 146.34 214.99 172.89 124.92 77.29 91.84 135.42 80.95 49.43 102.24 59.20 95.09 62.70 2 339865 Transcript 0 0.61 6.84 1.16 6.20 0.68 10.26 6.63 3.94 16.65 19.75 12.39 10.15 4.36 20.24 9.31 11.57 15.39 47.45 7.04 18.36 10.22 5.35 10.95 3 399455 Transcript 1 7.62 25.30 15.75 16.81 13.01 19.82 21.25 27.15 46.08 43.81 84.36 100.08 88.85 74.88 13.48 58.49 91.23 51.76 11.07 48.99 46.95 54.00 28.91 4 305481 Transcript 0 3.45 2.87 1.25 0.48 1.88 0.44 2.45 0.54 0.04 0.40 2.95 1.66 1.69 1.60 0.05 1.38 0.77 0.46 0.00 1.04 0.49 1.03 0.68 5 ER1a ExonRegion 0 1.21 4.14 2.32 2.20 1.36 4.27 4.26 5.37 8.25 8.71 14.77 2.60 1.89 17.23 2.93 11.01 18.62 21.19 6.17 17.75 14.15 5.37 10.72 6 E1a_E2a NovelJunction 0 0.00 0.00 6.18 0.00 0.00 0.00 2.25 4.11 1.53 2.66 2.68 6.30 0.00 9.59 0.00 21.36 12.90 5.93 0.00 18.28 5.56 0.00 20.66 7 E1a_E3a NovelJunction 1 0.00 17.30 16.08 14.22 0.00 4.66 8.04 35.16 64.64 59.10 107.08 48.92 39.77 93.88 39.06 202.43 86.77 109.60 42.92 39.31 36.70 39.37 78.62 8 E1a_E4a KnownJunction 0 0.00 9.54 0.00 10.19 0.00 16.24 9.01 2.51 25.06 30.78 10.00 17.71 6.82 23.25 15.70 12.13 12.16 73.70 7.91 18.98 6.30 5.33 11.18 9 ER2a ExonRegion 0 0.07 0.14 0.94 0.23 0.00 0.49 0.18 0.29 1.07 1.43 1.68 3.03 0.47 3.87 0.15 4.06 5.45 0.46 0.42 4.82 1.87 8.54 7.78 10 E2a_E3a KnownJunction 0 0.00 0.00 2.93 0.00 0.00 0.00 0.00 0.00 1.45 1.67 5.05 0.00 0.00 0.00 0.00 4.36 4.77 0.00 0.00 8.44 2.72 8.94 11.44 11 ER3a ExonRegion 1 6.68 39.37 22.38 25.25 25.13 54.89 46.26 43.74 80.14 69.36 154.28 163.50 133.53 125.42 23.86 88.38 157.33 76.12 32.74 90.53 75.86 78.15 42.57 12 E3a_E4a KnownJunction 1 23.71 61.70 36.75 41.75 26.91 23.91 38.55 64.57 101.68 102.77 176.41 233.78 221.41 170.23 29.92 137.14 197.38 130.45 11.11 92.17 107.37 120.39 53.86 13 ER4a ExonRegion 1 17.51 67.89 26.47 66.35 33.71 74.45 71.20 78.24 134.24 144.72 208.50 331.81 246.84 238.10 43.37 159.69 240.07 156.26 55.24 137.68 163.94 121.23 83.33 14 E4_Da NovelBoundary 0 7.11 9.87 22.56 1.70 4.33 0.00 12.76 3.82 5.64 7.09 6.53 6.60 6.17 0.00 8.90 0.00 3.46 0.00 0.00 19.56 6.30 5.45 4.35 15 E4a_E5a KnownJunction 1 10.08 87.29 17.74 66.36 56.37 142.25 113.76 91.31 153.38 170.76 166.99 465.60 337.80 272.18 55.38 166.20 250.49 149.73 39.34 147.01 167.11 154.68 57.02 16 ER5a ExonRegion 1 15.00 79.60 18.98 64.55 56.65 92.51 90.85 76.20 118.14 154.09 193.46 378.28 273.20 189.50 43.83 139.73 221.11 117.11 25.51 105.77 110.99 109.21 69.38 17 E5a_E6a KnownJunction 1 32.67 100.90 24.10 72.75 92.02 85.52 145.74 96.73 141.87 198.72 221.21 379.32 386.50 251.10 73.43 132.53 203.37 83.74 40.47 110.51 70.30 143.59 64.79 18 ER6a ExonRegion 1 15.16 84.09 15.37 58.21 64.49 103.11 116.25 77.80 141.68 176.19 254.19 420.45 331.74 211.76 44.92 143.83 235.59 90.67 36.25 121.01 52.66 132.94 85.53 19 E6a_E7a KnownJunction 1 15.85 95.90 26.08 67.76 39.64 138.50 151.43 76.19 130.70 182.29 177.62 362.22 255.18 145.62 27.57 134.92 179.71 81.46 46.97 123.94 55.04 107.83 98.00 20 ER7a ExonRegion 1 22.44 91.13 16.76 69.96 66.25 132.51 107.78 80.88 134.28 161.63 227.18 399.50 361.13 202.56 44.63 166.54 201.31 135.70 38.77 140.67 78.08 119.47 86.63 21 E7a_E8a KnownJunction 0 13.71 80.84 17.00 84.77 89.73 80.69 77.59 75.95 140.59 160.88 191.36 340.76 290.57 195.77 71.70 160.04 280.04 168.47 47.25 139.21 84.76 112.85 118.14 22 ER8a ExonRegion 1 13.31 66.50 9.42 58.84 70.71 70.17 117.01 80.76 126.21 142.06 263.57 395.55 296.88 218.10 47.76 162.39 274.96 165.90 54.31 154.95 135.67 132.77 89.35 23 E8a_E9a KnownJunction 1 30.30 74.26 23.86 59.70 90.58 72.40 129.09 94.72 120.22 149.62 212.37 370.77 284.88 255.58 63.79 200.97 250.30 161.42 72.00 150.46 152.03 125.22 64.19 24 ER9a ExonRegion 1 18.54 71.23 24.54 68.01 73.46 111.60 116.95 87.30 125.24 172.46 253.62 409.88 303.26 278.84 64.56 193.03 285.20 209.44 56.81 190.82 165.62 131.86 108.17 25 E9a_E10a KnownJunction 1 34.01 82.02 32.02 64.06 62.99 107.44 94.64 99.73 114.73 169.04 239.11 342.26 187.97 281.12 52.17 156.03 336.70 187.83 53.08 160.05 171.19 157.00 94.50 26 ER10a ExonRegion 1 30.34 78.82 28.25 73.62 76.04 103.11 98.15 89.93 129.19 166.78 234.61 396.15 319.31 266.07 64.98 185.97 269.88 147.32 63.74 193.53 138.51 112.86 85.59 27 E10a_E11a KnownJunction 1 31.56 78.47 32.26 79.01 58.23 93.07 80.46 97.92 131.25 154.00 207.00 322.15 303.88 254.22 65.52 186.11 210.00 96.79 57.13 157.36 110.09 100.30 113.87 28 ER11a ExonRegion 1 39.04 83.91 29.54 67.58 85.82 118.29 141.79 103.33 148.98 162.07 232.50 274.62 290.97 229.00 56.75 158.80 239.76 120.35 66.18 168.64 80.66 133.39 92.44 29 E11a_E12a KnownJunction 0 31.04 80.51 34.98 107.48 95.67 212.66 196.79 106.34 124.51 148.33 253.06 288.99 243.33 161.40 54.64 125.69 230.39 118.35 35.39 153.08 64.00 118.06 57.36 30 I11_SR3 SilentIntronRegion 0 8.02 3.38 0.61 4.04 7.64 5.00 5.93 9.41 10.87 5.47 7.73 32.57 37.73 9.89 1.82 4.35 7.05 0.00 0.00 6.93 0.00 10.40 6.01 31 ER12a ExonRegion 1 41.13 66.16 35.21 87.03 96.37 129.89 124.37 126.44 167.43 188.02 275.98 364.09 351.33 216.56 57.06 133.46 256.35 117.00 49.83 173.20 69.30 138.52 88.92 32 E12a_E13a KnownJunction 0 22.45 55.52 32.91 99.85 84.89 156.56 190.43 153.99 181.86 224.75 356.83 348.71 510.36 196.19 79.86 157.91 407.67 98.16 78.12 206.96 88.22 157.74 82.72 33 ER13a ExonRegion 1 47.85 67.32 27.99 80.70 103.08 176.35 174.21 109.59 156.74 176.31 249.56 475.29 373.14 226.70 55.74 141.36 272.25 104.66 48.94 172.55 69.35 127.80 78.84 34 E13a_E14a KnownJunction 1 98.61 137.74 36.28 98.19 172.92 286.43 234.42 141.95 159.89 188.49 242.59 600.50 464.90 289.19 73.06 154.83 253.02 106.83 69.65 189.64 85.44 114.08 122.92 35 ER14a ExonRegion 0 49.31 54.46 30.68 88.25 91.18 148.18 112.09 105.57 139.97 181.14 236.14 383.97 292.30 217.13 68.91 136.49 248.85 88.67 75.37 152.56 54.72 137.30 77.12 36 E14a_E15a KnownJunction 0 73.20 63.15 36.90 82.61 103.23 100.00 133.99 106.18 139.26 192.14 270.70 300.70 261.02 194.36 69.10 136.89 318.84 89.71 65.88 156.72 53.93 147.08 57.19 37 ER15a ExonRegion 1 64.55 78.33 41.55 74.30 105.26 109.41 118.83 100.37 148.57 197.70 270.12 443.69 272.78 230.74 55.64 136.66 234.48 88.72 51.88 152.36 50.49 137.10 64.24 38 E15a_E16a KnownJunction 0 125.73 82.62 51.33 83.61 96.86 112.89 175.46 109.71 162.64 212.96 251.43 537.78 280.99 277.59 85.17 105.87 148.29 56.21 92.14 121.06 36.45 123.69 38.41 39 ER16a ExonRegion 0 76.64 96.53 36.37 93.18 101.65 155.60 168.74 108.51 170.56 205.92 224.59 417.39 291.20 198.34 73.33 115.44 198.75 48.68 46.26 122.10 26.17 150.84 56.06 40 E16a_E17a KnownJunction 0 70.31 102.81 34.21 110.01 132.43 191.14 171.22 78.99 173.73 220.59 213.79 444.74 210.21 202.90 71.70 69.64 169.99 54.22 49.04 134.80 22.92 197.54 56.51 41 ER17a ExonRegion 0 85.69 82.93 43.69 112.54 137.05 158.63 163.99 98.06 170.85 205.93 205.16 393.16 264.65 171.74 71.73 103.63 136.78 91.30 36.62 134.47 17.80 169.34 62.68 42 E17a_E18a KnownJunction 0 123.65 90.51 47.78 126.22 125.21 149.40 177.89 98.87 200.98 217.61 273.65 294.25 224.01 196.78 105.57 100.66 206.64 78.64 60.61 136.02 34.04 186.88 67.35 43 ER18a ExonRegion 0 81.04 110.85 35.21 106.10 102.75 121.96 138.97 98.14 165.29 186.54 226.97 402.91 244.74 180.18 75.35 122.96 211.67 97.17 45.84 143.05 58.64 138.84 85.23 44 E18a_E19a KnownJunction 0 108.91 151.29 35.30 104.38 200.00 149.18 191.14 90.28 136.98 212.37 251.70 456.75 229.69 183.47 76.52 124.33 193.55 79.51 72.28 148.86 64.50 93.87 106.19 45 ER19a ExonRegion 0 109.02 131.52 46.92 104.67 136.83 144.29 152.85 121.05 189.27 202.61 289.35 444.33 282.94 194.47 71.33 146.48 251.24 102.88 70.24 144.00 86.48 123.92 108.25 46 E19a_E20a KnownJunction 0 199.00 159.05 61.80 118.53 144.14 123.57 214.67 124.41 214.09 226.80 318.87 505.96 289.75 213.73 76.64 170.47 266.11 155.86 77.18 133.08 103.66 145.98 171.75 47 ER20a ExonRegion 0 117.47 135.08 61.28 116.80 151.36 146.89 159.45 120.21 207.92 214.81 302.60 463.25 280.85 227.73 96.76 195.79 280.33 124.23 72.68 133.90 113.14 175.36 114.43 48 E20a_E21a KnownJunction 0 132.99 163.52 82.29 116.83 236.76 196.99 205.89 119.40 226.73 214.90 249.38 518.42 265.89 230.39 88.02 203.71 280.69 107.32 90.54 192.97 122.81 130.73 96.12 49 ER21a ExonRegion 0 139.89 147.03 74.54 148.37 172.97 205.63 179.86 142.16 219.14 232.77 273.39 378.02 329.33 238.48 140.66 181.38 269.14 138.51 83.90 143.18 105.98 148.13 113.53 50 E21a_E22a KnownJunction 0 239.38 218.97 113.51 249.82 223.85 248.38 227.39 261.44 250.08 301.79 364.30 429.74 292.68 301.43 272.08 191.15 321.46 129.71 82.83 151.74 151.17 182.54 101.67 51 I21_SR1 SilentIntronRegion 0 27.24 21.68 9.18 9.76 12.22 7.70 12.80 13.66 12.19 11.82 7.73 19.19 18.62 11.62 6.70 6.73 7.58 8.82 6.15 13.72 3.84 9.98 7.86 52 I21_AR2 ActiveIntronRegion 0 72.74 32.47 22.45 26.21 20.91 12.12 21.28 21.29 24.93 16.69 11.28 16.28 15.33 9.16 8.18 9.04 10.30 13.41 9.95 18.82 7.09 13.46 7.32 53 ER22a ExonRegion 0 211.31 191.23 86.36 205.76 243.26 212.91 234.70 207.21 216.67 261.10 309.41 466.52 355.72 256.74 185.30 209.03 286.37 142.71 105.55 157.33 126.86 190.17 133.52 54 E22a_E23a KnownJunction 0 349.47 210.95 117.18 174.64 406.79 280.29 324.86 242.83 180.06 274.02 279.44 542.13 552.89 279.83 251.31 192.51 283.03 112.92 89.41 189.64 89.33 151.80 94.67 55 ER23a ExonRegion 0 233.55 208.40 100.77 177.93 277.45 244.73 207.29 208.97 207.62 236.97 279.91 403.82 314.29 205.08 160.03 182.44 257.35 121.06 91.35 132.94 94.13 194.46 99.27 56 E23a_E24a KnownJunction 0 270.20 275.74 117.86 205.37 192.44 213.85 177.98 241.60 251.97 275.63 261.49 310.15 269.14 226.21 150.94 167.39 264.61 126.64 116.90 136.34 86.55 223.99 81.18 57 ER24a ExonRegion 0 241.83 258.63 106.71 162.00 240.33 234.41 208.93 200.37 198.70 272.55 255.29 356.58 268.22 166.86 160.12 139.69 256.30 106.60 81.36 137.88 66.83 144.10 96.78 58 E24a_E25a KnownJunction 0 278.79 229.83 104.52 182.59 259.93 234.81 238.39 192.84 215.56 257.20 236.69 402.43 262.97 168.17 128.69 131.59 251.33 114.33 72.85 145.80 67.28 146.47 81.61 59 ER25a ExonRegion 0 273.24 243.24 126.20 202.83 310.72 216.25 242.78 193.85 218.97 298.45 282.49 377.48 299.99 260.49 172.37 202.96 239.07 103.84 116.54 139.25 92.31 217.44 109.21 60 E25_Ab KnownBoundary 0 403.92 238.90 158.27 192.38 422.16 236.28 310.99 183.15 213.48 319.36 258.28 320.50 281.80 312.85 223.01 187.90 217.48 97.83 112.29 135.12 106.32 185.90 114.47 61 ER25b ExonRegion 0 372.18 235.53 151.13 179.41 359.79 242.58 260.14 173.20 199.93 286.40 273.18 291.30 297.64 245.03 206.44 178.02 223.70 98.26 87.07 147.95 106.06 171.49 120.78 62 E25a_E26a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 E25a_E27a KnownJunction 0 471.71 305.74 157.39 209.90 395.25 275.13 275.75 196.54 201.97 274.96 267.59 201.22 265.08 215.26 273.19 160.64 210.10 99.12 61.55 158.77 89.39 173.90 126.34 64 I25 Intron 0 11.73 16.01 4.14 10.49 16.68 14.20 14.33 15.57 14.02 16.68 12.05 24.42 13.01 14.03 2.84 6.74 8.11 5.45 2.61 9.51 3.47 22.43 8.13 65 I25_AR1 ActiveIntronRegion 0 9.52 16.88 3.83 10.56 14.45 12.65 11.52 12.88 12.70 18.97 11.59 32.41 16.07 14.53 2.61 7.42 7.26 5.25 2.87 9.57 2.64 28.34 7.64 66 ER26a ExonRegion 0 10.35 8.61 3.74 1.44 5.64 1.33 7.35 1.61 0.12 1.21 6.17 4.98 5.08 4.81 0.16 4.15 2.31 1.37 0.00 3.12 1.48 3.08 2.05 67 E26a_E27a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 I26 Intron 0 27.30 7.75 9.28 15.07 20.03 16.92 24.07 20.49 17.47 18.74 15.12 26.03 17.87 10.58 8.69 8.94 8.83 6.70 1.28 7.82 3.39 16.99 7.66 69 I26_AR1 ActiveIntronRegion 0 34.37 9.77 11.90 17.88 21.72 21.81 27.55 24.74 18.52 21.89 15.70 27.17 19.09 12.98 10.80 9.86 8.67 7.37 1.46 7.54 3.28 18.35 8.73 70 E27_Aa NovelBoundary 0 82.61 19.67 7.30 22.61 48.81 11.36 23.67 52.37 23.64 37.42 19.32 18.91 32.95 11.77 8.90 3.42 17.95 6.59 0.00 16.55 7.41 25.23 8.71 71 ER27a ExonRegion 0 329.29 312.07 138.38 188.11 226.54 253.50 223.04 211.49 232.09 284.05 269.20 336.61 257.70 215.97 214.34 171.16 194.17 126.10 77.11 139.94 109.82 162.32 105.43 72 E27a_E28a KnownJunction 0 457.64 406.11 148.10 172.57 312.82 334.07 271.29 222.01 253.09 302.47 358.93 291.24 227.42 331.27 212.37 178.84 201.78 92.32 103.53 171.43 108.73 206.66 115.15 73 ER28a ExonRegion 0 299.62 360.03 171.19 203.07 331.96 301.35 230.59 249.80 269.82 339.56 313.45 298.01 201.09 246.70 210.76 182.97 196.61 109.67 80.83 168.26 95.26 195.63 120.10 74 E28a_E29a KnownJunction 0 318.43 439.92 180.98 218.55 411.46 253.94 274.65 246.32 256.25 318.64 240.32 303.40 213.46 203.19 201.74 155.17 174.85 90.95 51.39 173.54 85.44 212.79 104.66 75 ER29a ExonRegion 0 353.89 351.19 210.85 290.65 343.56 261.44 266.23 306.03 283.39 348.45 230.40 271.57 324.72 196.00 265.59 170.91 188.88 91.15 70.64 164.74 44.34 221.14 110.70 76 E29a_E30a KnownJunction 0 753.69 361.91 237.78 343.38 388.79 336.45 322.21 304.48 284.95 356.22 218.21 196.11 237.81 210.55 282.34 105.36 175.22 66.53 61.46 149.76 22.73 272.24 83.14 77 ER30a ExonRegion 0 144.44 219.30 102.66 183.43 166.91 146.99 117.86 160.40 183.11 193.07 65.92 95.55 81.40 51.80 71.07 38.88 50.77 55.25 45.52 79.84 36.23 64.85 41.91 78 E30_Da KnownBoundary 0 15.41 39.53 33.65 74.12 36.08 76.94 24.91 47.40 132.55 55.26 2.42 5.40 0.00 2.12 0.00 0.00 8.60 9.82 3.76 66.67 28.97 39.43 7.43 79 ER30b ExonRegion 0 22.97 46.26 13.32 43.27 36.56 57.36 17.63 26.96 77.62 32.89 0.74 5.54 2.78 0.93 1.87 1.76 4.13 9.77 12.11 18.60 12.76 15.77 14.29 80 IG9 Intergenic 0 3.23 7.43 4.01 8.49 9.30 25.50 10.66 9.50 46.02 14.18 0.14 0.25 0.27 0.09 0.62 0.63 0.35 10.42 5.53 14.19 23.75 7.24 25.10 81 IG9_AR1 ActiveIntergenicRegion 0 3.23 7.44 4.02 8.50 9.31 25.54 10.67 9.51 46.09 14.20 0.14 0.25 0.27 0.10 0.62 0.63 0.35 10.44 5.54 14.21 23.79 7.25 25.14