Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PLEKHA7 Gene 0 8.69 5.19 7.92 13.64 5.77 2.31 7.81 10.58 13.60 15.54 4.21 3.45 0.98 4.30 1.70 1.12 0.31 29.13 22.61 21.56 1.31 0.85 0.89 2 448080 Transcript 0 3.41 11.97 2.90 10.39 29.12 2.90 22.17 9.82 18.14 24.34 7.11 6.30 0.00 2.35 0.00 0.00 0.00 41.74 9.32 11.51 2.41 0.00 0.00 3 355661 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 1.56 0.00 6.15 0.00 2.47 0.00 0.00 0.00 3.73 0.00 2.56 0.00 0.00 0.00 4 332954 Transcript 0 0.61 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.89 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 2.23 3.02 2.88 0.00 1.41 2.87 13.23 1.35 2.75 7.66 1.02 0.00 0.00 5.53 0.00 0.00 0.00 11.56 35.10 5.13 0.00 1.10 0.00 6 E1a_E2a KnownJunction 0 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 1.39 5.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.24 0.00 3.26 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.45 1.96 1.31 0.21 0.38 0.33 0.36 2.39 4.51 2.61 0.00 0.00 1.39 0.00 0.00 0.00 6.91 0.08 6.08 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 0.00 0.00 10.08 0.00 0.00 2.16 1.94 0.00 3.36 5.29 9.16 0.00 0.00 2.47 0.00 0.00 0.00 6.30 3.58 8.37 0.00 0.00 0.00 9 ER3a ExonRegion 0 0.36 4.07 7.61 3.50 2.08 1.14 4.22 6.97 7.24 8.50 3.87 0.00 0.00 7.08 2.35 2.05 0.00 24.94 47.84 14.86 0.00 1.44 2.53 10 E3a_E4a KnownJunction 0 3.04 3.35 4.20 7.89 0.00 0.00 0.00 11.58 8.97 13.62 7.58 0.00 0.00 14.24 5.19 3.59 0.00 39.63 65.04 20.13 0.00 2.57 0.00 11 ER4a ExonRegion 0 6.58 4.55 0.96 10.74 1.21 0.87 7.12 6.67 8.91 13.07 3.64 0.00 0.00 6.71 2.62 1.10 0.00 24.72 22.37 29.76 0.00 0.27 0.35 12 E4a_E5a KnownJunction 0 13.85 0.00 1.42 10.42 3.74 2.90 17.44 9.12 6.39 14.29 9.42 0.00 0.00 0.00 0.00 4.36 0.00 19.19 8.38 35.03 0.00 0.00 3.24 13 ER5a ExonRegion 0 2.59 6.03 2.44 5.18 1.53 2.69 7.28 8.07 12.31 9.02 6.11 2.40 0.00 1.61 2.80 0.82 0.00 18.82 10.95 27.28 0.00 0.00 1.13 14 E5a_E6a KnownJunction 0 0.00 3.29 7.45 14.12 0.00 0.00 0.00 6.57 13.19 5.56 2.26 6.30 0.00 2.12 0.00 0.00 0.00 33.54 17.04 22.50 0.00 0.00 0.00 15 ER6a ExonRegion 0 1.03 5.62 12.35 9.31 1.30 0.00 5.21 11.13 15.16 14.17 4.53 2.64 0.67 3.16 1.63 1.44 0.00 14.48 20.51 29.99 0.00 0.52 0.00 16 E6a_E7a KnownJunction 0 0.00 5.79 4.49 9.52 3.74 0.00 0.00 13.84 21.04 20.17 9.63 0.00 6.33 2.30 4.45 0.00 0.00 17.99 8.85 33.11 0.00 3.12 0.00 17 ER7a ExonRegion 0 5.60 9.97 16.32 10.77 0.04 0.20 3.34 9.47 20.18 18.99 6.17 3.44 1.73 1.67 2.94 1.55 0.00 22.00 14.49 35.85 0.00 1.97 0.00 18 E7a_E8a KnownJunction 0 0.00 8.35 32.94 9.72 0.00 2.21 8.52 8.63 9.87 24.93 2.32 6.30 0.00 2.47 4.45 3.76 0.00 22.34 14.59 24.93 0.00 2.33 0.00 19 ER8a ExonRegion 0 4.17 5.82 14.68 10.71 4.69 1.92 6.75 12.20 14.21 22.28 1.86 2.91 0.00 3.28 0.32 1.68 0.00 19.36 26.97 28.17 0.00 1.01 0.00 20 E8a_E9a KnownJunction 0 16.00 0.00 12.86 12.89 4.33 5.74 3.40 12.24 18.37 25.28 9.48 0.00 0.00 0.00 0.00 3.25 0.00 24.42 13.46 7.93 0.00 5.39 0.00 21 ER9a ExonRegion 0 6.35 2.32 8.72 14.91 0.40 0.41 3.23 12.10 12.03 19.37 2.28 0.00 2.61 4.93 1.81 1.84 1.54 39.61 26.82 21.16 1.11 0.11 0.85 22 E9a_E10a KnownJunction 0 6.89 0.00 6.95 14.55 3.82 0.00 1.72 14.79 12.44 20.23 2.37 0.00 7.30 2.47 10.75 0.00 8.70 36.64 3.58 35.03 6.05 0.00 0.00 23 ER10a ExonRegion 0 2.40 3.68 10.89 15.49 1.49 1.49 5.34 10.77 15.81 19.22 3.18 1.78 2.14 4.69 1.80 1.61 0.86 40.95 27.95 28.03 2.31 1.30 0.32 24 E10a_E11a KnownJunction 0 3.78 3.16 8.69 13.88 0.00 2.90 2.25 12.20 17.91 15.04 0.00 7.65 12.66 2.30 0.00 0.00 0.00 27.40 27.77 29.72 3.09 2.69 0.00 25 ER11a ExonRegion 0 2.55 2.02 6.01 7.19 1.43 1.23 7.57 6.78 12.40 12.45 3.79 3.02 1.07 2.55 1.78 0.87 0.20 33.09 18.28 20.96 2.32 0.66 1.43 26 E11a_E12a KnownJunction 0 6.96 0.00 4.88 8.06 6.88 10.56 4.15 11.17 11.89 7.68 5.37 0.00 0.00 0.00 10.14 0.00 4.68 44.89 13.93 21.03 2.59 0.00 0.00 27 ER12a ExonRegion 0 3.28 3.18 3.92 15.56 7.54 2.76 3.00 7.33 16.23 9.44 2.62 2.09 0.00 6.87 3.97 0.00 1.94 28.52 21.13 32.18 1.01 0.17 1.72 28 E12a_E13a KnownJunction 0 3.78 3.35 8.46 18.31 11.46 0.00 0.00 9.90 18.95 11.82 2.47 0.00 0.00 7.24 4.45 0.00 4.68 32.83 22.31 26.14 0.00 2.33 0.00 29 ER13a ExonRegion 0 5.17 5.27 8.55 11.08 7.93 0.10 2.99 11.36 12.63 10.56 2.22 6.41 0.00 6.08 2.47 0.00 2.75 30.11 27.37 20.37 0.00 4.78 1.36 30 E13a_E14a KnownJunction 0 7.56 7.89 10.23 11.22 8.23 0.00 8.39 12.73 7.58 10.93 2.68 0.00 0.00 4.83 6.18 0.00 4.77 26.20 20.05 12.66 0.00 3.12 4.35 31 E14_Aa NovelBoundary 0 0.00 0.00 0.00 5.29 0.00 0.00 1.77 0.00 3.30 1.56 0.00 13.95 0.00 0.00 0.00 0.00 0.00 9.66 4.52 2.68 0.00 0.00 0.00 32 ER14a ExonRegion 0 10.34 5.89 12.68 18.86 5.39 0.00 9.84 9.69 13.82 11.45 3.89 5.02 0.00 5.04 4.20 0.00 1.20 23.81 20.40 29.97 0.45 0.66 3.11 33 E14a_E15a KnownJunction 0 3.33 12.04 8.28 26.74 12.56 0.00 12.59 8.67 19.94 17.94 4.53 7.50 0.00 5.47 0.00 4.36 0.00 24.37 21.93 23.39 2.78 0.00 0.00 34 E15_Aa NovelBoundary 0 12.67 0.00 5.91 1.90 8.32 0.00 2.25 0.00 3.30 1.34 2.68 7.05 0.00 0.00 0.00 0.00 0.00 10.28 0.00 11.38 5.56 0.00 0.00 35 ER15a ExonRegion 0 11.34 12.58 8.44 20.26 11.53 3.80 10.23 15.19 25.77 25.88 10.33 3.79 0.00 6.30 2.36 1.36 1.02 39.56 36.89 30.37 3.02 0.03 0.15 36 E15a_E16a KnownJunction 0 17.26 18.22 12.68 27.57 3.14 5.28 14.79 27.68 21.15 27.59 7.69 6.30 0.00 7.36 4.45 3.85 4.77 47.88 33.98 39.25 5.56 0.00 0.00 37 ER16a ExonRegion 0 16.35 19.44 9.95 24.30 10.11 0.44 11.62 20.08 20.55 16.19 10.53 11.60 1.16 9.34 0.81 1.29 1.43 44.22 35.23 35.45 2.60 0.69 2.92 38 E16a_E17a KnownJunction 0 13.19 21.90 7.63 22.47 15.70 0.00 10.20 12.65 12.18 11.44 7.21 5.70 0.00 10.18 0.00 0.00 4.02 32.13 12.52 25.57 0.00 0.00 0.00 39 E17_Aa NovelBoundary 0 3.63 6.71 0.00 5.39 8.06 0.00 10.64 1.97 1.36 1.67 5.37 0.00 0.00 0.00 0.00 0.00 0.00 14.22 26.26 5.31 0.00 0.00 3.41 40 ER17a ExonRegion 0 11.93 14.45 14.55 28.27 16.58 1.04 19.43 21.78 25.94 24.20 10.90 16.85 0.23 8.53 1.02 0.00 0.39 58.66 44.60 47.96 1.30 1.04 4.38 41 E17_Da NovelBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 4.15 0.00 3.91 1.67 2.37 0.00 0.00 0.00 0.00 0.00 0.00 14.26 4.80 5.50 0.00 0.00 0.00 42 E17a_E18a KnownJunction 0 22.67 2.76 13.39 32.66 7.30 0.00 16.69 22.34 41.61 27.35 9.95 0.00 0.00 14.19 0.00 0.00 0.00 75.32 57.60 43.40 5.87 0.00 0.00 43 I17_AR1 ActiveIntronRegion 0 3.74 4.59 3.50 2.31 3.80 0.70 2.89 1.17 2.01 3.35 0.21 0.00 0.00 0.00 0.00 0.53 0.00 14.23 8.18 8.60 0.00 0.22 0.31 44 E18_Aa NovelBoundary 0 2.74 3.35 6.33 8.66 4.33 0.00 0.00 2.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.82 13.27 9.27 0.00 0.00 0.00 45 ER18a ExonRegion 0 15.84 12.33 15.84 28.35 7.93 6.75 13.88 20.92 32.77 34.68 7.59 12.35 3.61 11.88 0.29 1.39 0.00 51.55 53.33 39.98 3.46 0.29 1.24 46 E18a_E19a KnownJunction 0 11.11 32.89 18.42 26.34 0.00 0.00 17.18 7.80 26.56 38.25 7.53 14.25 0.00 7.89 4.45 0.00 0.00 52.77 32.38 34.71 5.56 2.82 3.50 47 E19_Aa NovelBoundary 0 7.26 0.00 0.00 1.90 0.00 0.00 1.94 4.81 4.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.44 21.27 9.14 2.90 0.00 0.00 48 ER19a ExonRegion 0 15.24 14.98 8.04 20.39 10.49 2.63 13.44 12.75 20.63 25.93 6.85 8.77 0.00 6.78 1.30 0.67 0.00 54.09 39.22 27.67 1.77 0.80 0.79 49 E19a_E21a KnownJunction 0 3.41 11.97 2.90 10.39 29.12 2.90 22.17 9.82 18.14 24.34 7.11 6.30 0.00 2.35 0.00 0.00 0.00 41.74 9.32 11.51 2.41 0.00 0.00 50 E19a_E21b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 1.56 0.00 6.15 0.00 2.47 0.00 0.00 0.00 3.73 0.00 2.56 0.00 0.00 0.00 51 ER20a ExonRegion 0 1.23 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.15 1.78 0.00 0.00 0.00 0.00 52 E20a_E21a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER21a ExonRegion 0 4.23 4.07 3.37 9.20 21.41 7.34 13.24 10.37 16.37 18.92 5.80 5.41 0.00 5.28 2.90 0.00 0.00 51.74 11.95 9.04 0.00 0.00 0.00 54 ER21b ExonRegion 0 4.85 2.11 5.70 12.42 4.28 2.07 5.23 8.39 9.38 14.98 7.02 1.93 0.00 5.22 1.60 0.43 0.00 28.27 13.94 18.93 1.20 0.57 0.48 55 E21a_E22a KnownJunction 0 13.11 6.71 13.51 13.85 8.66 7.21 15.19 16.31 10.10 23.96 2.21 0.00 0.00 9.71 0.00 4.36 0.00 32.21 15.81 17.83 0.00 0.00 4.18 56 ER22a ExonRegion 0 8.43 4.02 10.29 16.46 2.54 4.06 8.15 9.24 13.04 16.29 3.37 0.00 0.00 4.24 0.93 0.60 0.00 37.11 14.17 27.44 1.31 1.32 1.34 57 E22a_E23a KnownJunction 0 2.82 3.29 15.76 19.51 3.40 0.00 4.24 8.46 15.34 14.56 2.00 0.00 0.00 0.00 4.45 0.00 0.00 44.48 21.84 44.61 3.09 3.12 4.10 58 E23_Aa NovelBoundary 0 3.78 0.00 1.83 10.95 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.33 4.80 5.69 0.00 0.00 0.00 59 ER23a ExonRegion 0 3.97 6.98 16.51 22.20 2.68 0.12 4.66 8.66 15.20 21.64 4.31 3.50 0.00 3.59 1.81 1.34 0.00 34.68 24.44 25.29 1.76 0.54 1.92 60 E23a_E24a KnownJunction 0 0.00 15.19 7.39 30.17 7.39 2.16 12.59 11.75 19.94 24.55 2.68 13.80 0.00 2.47 0.00 0.00 0.00 44.98 42.73 9.33 0.00 0.00 0.00 61 ER24a ExonRegion 0 14.38 3.65 6.65 13.89 9.36 3.67 8.62 11.49 11.63 13.69 3.30 2.85 1.21 3.23 1.84 1.40 0.00 20.38 17.59 14.03 1.03 0.98 0.55 62 IG37_AR15 ActiveIntergenicRegion 0 1.88 8.03 1.79 6.38 5.04 2.71 5.08 5.04 3.03 6.13 0.75 1.96 0.00 0.65 0.00 0.00 0.00 18.02 16.15 15.18 0.15 0.31 0.00 63 IG37_SR10 SilentIntergenicRegion 0 2.87 4.42 1.45 8.02 1.49 2.90 6.33 7.35 5.69 8.57 0.87 0.00 0.00 0.93 0.00 0.00 0.00 22.93 9.51 11.94 0.00 0.47 0.66 64 IG37_AR14 ActiveIntergenicRegion 0 2.04 8.34 7.81 9.73 3.38 0.58 5.63 6.47 12.09 13.00 1.24 1.14 0.00 1.81 0.00 0.00 0.00 33.79 17.43 30.30 0.00 1.34 0.00 65 IG37_AR13 ActiveIntergenicRegion 0 4.83 4.01 6.08 9.87 1.08 1.40 2.69 8.26 6.26 10.31 2.94 0.00 0.00 0.51 0.00 0.00 0.00 25.91 9.70 28.07 0.00 1.59 1.12 66 IG37_SR8 SilentIntergenicRegion 0 1.08 0.78 2.59 6.57 2.20 0.47 1.27 2.64 0.84 3.65 0.37 0.50 0.00 0.26 0.00 0.38 0.00 16.00 6.69 9.73 0.14 0.00 0.37 67 IG37_AR12 ActiveIntergenicRegion 0 4.47 4.29 4.50 13.48 6.59 2.58 4.63 9.86 7.44 11.28 2.04 1.25 0.00 2.06 0.00 0.00 0.00 28.40 10.11 21.95 0.00 0.00 1.03 68 IG37_AR11 ActiveIntergenicRegion 0 1.66 0.00 4.64 7.23 0.00 0.96 0.00 0.30 0.00 3.49 1.93 0.00 0.00 0.14 0.00 0.00 0.00 32.86 14.26 9.16 0.00 0.00 2.94 69 IG37_AR6 ActiveIntergenicRegion 0 3.66 8.38 11.99 16.83 4.37 0.87 6.43 8.43 8.31 10.04 2.01 1.75 0.00 1.43 1.56 0.29 0.00 23.72 14.57 17.03 0.00 0.30 0.35 70 IG37_AR5 ActiveIntergenicRegion 0 1.92 9.24 13.37 13.63 2.68 0.50 5.60 9.74 5.89 8.03 1.76 1.18 0.00 2.44 0.00 0.00 0.00 20.91 7.24 32.50 0.00 2.08 3.34 71 IG37_AR4 ActiveIntergenicRegion 0 2.12 12.20 13.30 16.35 2.68 0.00 7.75 8.64 8.29 11.47 0.00 4.33 0.00 3.25 0.00 0.00 0.00 24.81 15.47 38.30 0.00 0.60 5.87 72 IG37_AR3 ActiveIntergenicRegion 0 2.12 12.20 10.24 16.68 2.68 0.00 8.41 6.81 9.44 12.62 0.00 4.33 0.00 2.58 0.00 0.00 0.00 25.87 19.49 33.67 0.00 0.00 4.15 73 IG37_SR3 SilentIntergenicRegion 0 4.83 8.13 5.72 19.07 3.90 0.00 5.79 9.61 7.79 10.68 2.10 1.36 0.00 1.12 1.34 0.00 0.00 27.48 16.77 26.66 0.00 0.57 1.87 74 IG37_AR2 ActiveIntergenicRegion 0 7.44 13.46 8.50 22.19 6.27 5.31 6.33 9.86 8.44 8.67 2.26 0.94 0.00 1.20 0.28 0.00 0.00 11.96 14.06 19.78 0.15 1.01 0.62 75 IG37_AR1 ActiveIntergenicRegion 0 11.49 12.49 6.13 12.07 14.14 5.50 15.89 11.85 9.35 20.64 0.00 4.33 9.38 1.62 0.00 3.82 0.00 2.11 6.37 9.73 4.41 6.25 2.94