Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UEVLD Gene 0 20.37 13.88 16.24 26.52 45.15 32.15 28.70 38.07 52.15 43.72 46.63 76.20 75.01 80.85 35.94 52.11 59.35 15.17 15.74 26.34 49.21 92.48 55.71 2 300038 Transcript 0 0.00 0.00 0.90 0.00 0.00 0.00 0.00 1.27 0.00 0.71 1.45 2.78 0.00 4.93 25.32 4.76 2.84 0.00 3.73 1.54 0.00 0.00 0.00 3 396196 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 379387 Transcript 0 0.00 3.22 0.00 0.00 0.00 0.00 0.00 1.73 3.30 1.07 4.95 0.00 0.00 0.00 0.00 6.75 0.00 1.95 0.00 0.00 21.99 3.00 4.35 5 320750 Transcript 0 3.70 0.00 4.29 0.00 0.00 10.79 4.28 6.53 4.80 4.49 4.95 17.71 20.29 10.71 5.44 4.02 24.12 0.00 7.34 5.18 13.78 22.84 4.10 6 396197 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 IG23_SR4 SilentIntergenicRegion 0 1.95 2.40 7.00 6.07 0.00 8.97 1.60 2.60 3.39 5.43 0.98 5.40 1.95 4.42 6.81 13.86 3.99 6.48 0.00 8.01 3.34 1.75 4.45 8 IG23_AR4 ActiveIntergenicRegion 0 3.68 6.03 7.00 7.28 3.95 7.03 0.25 7.94 9.68 8.16 4.99 14.64 7.04 1.59 2.56 3.04 6.37 6.67 1.25 5.07 2.39 0.02 5.94 9 IG23_AR3 ActiveIntergenicRegion 0 4.11 6.09 13.45 12.00 4.82 5.06 5.87 11.22 16.41 18.94 5.40 6.49 11.28 5.47 8.53 12.69 8.66 16.37 8.52 13.40 4.63 3.75 7.41 10 IG23_AR2 ActiveIntergenicRegion 0 2.53 3.29 10.53 6.61 7.15 9.35 9.78 7.49 5.15 10.20 8.64 6.02 2.18 11.01 8.89 9.85 17.30 9.84 9.26 8.08 8.34 2.55 7.86 11 ER1a ExonRegion 1 28.09 13.82 8.75 5.47 35.64 52.04 31.68 8.37 21.62 20.22 49.21 0.00 1.61 42.67 31.77 104.22 63.20 22.43 13.29 19.53 75.99 64.23 115.76 12 E1a_E2a KnownJunction 1 12.74 5.72 17.98 9.32 17.83 9.37 27.20 18.20 47.11 43.22 16.21 5.40 0.00 14.95 20.15 113.13 39.27 31.30 20.71 21.92 43.55 52.78 131.37 13 I1_AR3 ActiveIntronRegion 1 0.88 1.63 0.98 7.59 12.50 2.32 5.89 8.17 2.05 5.15 2.27 4.19 14.43 1.71 10.65 12.61 14.94 4.20 1.23 9.56 6.30 0.00 10.07 14 E2_Aa NovelBoundary 0 26.67 0.00 8.46 1.83 4.07 4.94 14.04 6.33 1.10 7.15 2.68 5.55 5.84 2.47 4.45 0.00 12.81 1.82 0.00 2.62 8.96 2.51 3.16 15 ER2a ExonRegion 0 6.70 1.70 8.69 5.90 9.19 8.37 15.97 24.10 33.48 26.18 54.14 13.19 16.99 26.20 13.69 38.46 70.06 12.37 10.27 19.80 73.09 31.20 50.54 16 E2a_E3a KnownJunction 0 0.00 0.00 10.73 7.79 14.94 15.90 6.62 20.78 34.69 29.36 68.44 6.30 7.63 59.63 21.51 30.25 74.24 17.29 12.05 18.47 74.19 66.32 29.88 17 E2a_E4a KnownJunction 0 0.00 3.22 0.00 0.00 0.00 0.00 0.00 1.73 3.30 1.07 4.95 0.00 0.00 0.00 0.00 6.75 0.00 1.95 0.00 0.00 21.99 3.00 4.35 18 ER3a ExonRegion 0 3.85 5.42 12.37 9.85 12.97 15.28 16.45 16.08 39.37 28.29 61.15 20.27 29.21 98.92 50.16 95.15 72.02 17.47 20.22 23.34 46.38 98.65 97.84 19 E3a_E4a KnownJunction 1 3.70 10.06 15.94 6.03 8.06 4.83 11.66 21.36 45.60 24.55 38.17 43.36 21.59 74.70 31.52 124.50 25.43 22.34 18.07 18.28 19.83 102.69 90.40 20 E3a_E5a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.01 3.59 4.22 7.63 5.55 0.00 2.47 0.00 16.24 0.00 2.57 0.00 9.40 0.00 0.00 0.00 21 E4_Aa NovelBoundary 0 9.48 3.09 0.00 6.36 0.00 2.33 18.72 13.31 2.78 7.66 0.00 6.00 6.66 7.18 0.00 4.36 0.00 4.56 3.48 8.12 3.03 2.63 0.00 22 ER4a ExonRegion 0 7.58 6.20 7.94 7.95 32.89 31.80 26.52 23.05 42.33 27.67 50.88 56.18 55.82 75.35 30.98 86.86 47.86 19.14 22.51 22.13 36.66 78.07 83.59 23 E4a_E5a KnownJunction 1 14.22 18.22 1.33 11.05 22.75 25.33 20.71 24.73 34.09 21.44 72.23 54.62 69.80 87.70 13.35 48.71 47.87 12.15 11.58 25.82 42.38 110.47 22.37 24 ER5a ExonRegion 0 15.27 16.66 7.00 14.75 15.25 22.01 21.94 15.71 37.25 22.74 54.55 64.81 60.73 82.82 23.32 41.68 60.19 10.96 18.34 23.58 42.58 76.71 45.06 25 E5a_E6a KnownJunction 0 20.67 17.63 2.37 11.59 4.33 28.90 17.89 24.52 35.62 17.92 47.12 91.08 89.28 109.13 70.34 95.36 103.88 11.52 4.61 22.82 49.79 77.71 86.73 26 E6_Aa NovelBoundary 0 3.78 0.00 3.02 7.92 20.46 4.66 16.65 4.56 2.34 10.05 0.00 0.00 23.05 7.06 0.00 0.00 0.00 0.00 0.00 9.14 0.00 3.12 0.00 27 ER6a ExonRegion 0 19.48 13.24 10.20 17.69 27.09 26.83 27.31 30.62 41.79 39.37 51.60 83.24 91.63 122.33 38.25 57.27 99.39 18.59 16.84 29.16 69.91 85.79 71.22 28 E6a_E7a KnownJunction 0 0.00 0.00 1.18 0.00 0.00 0.00 0.00 2.55 0.00 1.42 2.26 5.55 0.00 7.06 29.05 7.95 4.30 0.00 4.80 2.56 0.00 0.00 0.00 29 E6a_E8a KnownJunction 0 13.41 9.08 3.02 20.71 11.54 9.88 14.44 34.09 41.52 36.16 49.85 104.73 85.71 99.59 23.73 59.56 121.83 30.34 18.64 5.56 76.67 58.78 67.35 30 E7_Aa NovelBoundary 0 14.08 11.51 22.94 18.21 24.11 20.78 21.42 19.96 12.85 16.01 4.53 7.35 0.00 0.00 0.00 22.39 13.74 26.74 13.27 3.26 13.71 3.00 11.35 31 ER7a ExonRegion 1 0.00 0.00 0.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.00 0.00 2.80 21.60 1.57 1.38 0.00 2.65 0.53 0.00 0.00 0.00 32 E7_Da NovelBoundary 0 105.50 65.51 141.30 113.24 59.93 51.96 115.00 113.57 121.70 114.97 23.11 31.81 33.44 18.01 37.70 122.79 80.60 152.88 126.78 97.67 23.35 73.48 102.27 33 ER8a ExonRegion 0 11.67 11.39 8.04 16.70 20.21 22.49 25.04 30.12 43.11 35.42 57.69 86.72 81.28 104.37 34.42 69.43 81.79 25.56 13.51 34.19 102.31 86.60 94.63 34 E8a_E9a KnownJunction 0 11.85 8.62 1.83 17.65 40.07 15.56 17.93 28.59 45.08 31.00 48.43 64.37 48.05 99.42 31.77 59.04 69.28 23.84 25.79 29.72 95.69 91.42 61.80 35 E9_Aa NovelBoundary 0 0.00 18.75 1.48 12.62 7.47 5.28 6.36 2.55 10.39 8.84 0.00 0.00 0.00 5.18 5.56 4.02 0.00 3.61 4.52 5.43 0.00 3.12 0.00 36 ER9a ExonRegion 0 17.85 11.87 9.32 21.73 42.97 25.06 30.16 36.27 49.29 30.73 63.13 71.93 95.09 115.68 37.82 61.56 87.43 30.32 26.40 32.50 101.36 84.71 79.89 37 E9_Da NovelBoundary 0 10.89 0.00 2.96 5.16 3.14 8.35 1.94 4.03 6.28 4.75 2.00 0.00 6.82 5.47 0.00 11.96 13.65 9.45 0.00 8.69 0.00 0.00 0.00 38 E9a_E10a KnownJunction 0 39.78 12.10 17.83 27.04 49.32 49.01 48.67 29.70 43.08 32.56 48.70 30.16 27.76 142.39 74.91 79.12 86.86 26.94 9.60 40.40 70.43 52.48 105.42 39 E10_Aa NovelBoundary 0 19.11 14.41 3.40 10.95 16.21 7.27 10.73 8.75 2.52 21.92 2.32 7.20 6.82 12.77 0.00 14.27 0.00 0.00 0.00 8.88 0.00 2.63 7.34 40 ER10a ExonRegion 0 32.75 16.65 21.30 23.18 38.40 34.10 29.03 44.22 53.83 34.51 63.04 74.35 60.86 134.65 43.57 63.01 88.27 25.86 18.69 39.50 83.21 92.14 70.94 41 E10_Da NovelBoundary 0 7.26 2.89 5.32 14.88 12.90 0.00 0.00 0.00 10.50 21.41 0.00 5.85 0.00 4.94 4.45 7.26 0.00 6.14 0.00 21.48 3.03 5.88 7.43 42 E10a_E11a KnownJunction 1 52.01 15.19 12.42 20.74 31.15 12.83 16.25 40.99 35.04 32.13 47.43 68.12 73.37 127.67 49.82 39.05 105.66 21.18 16.57 24.10 101.93 58.05 36.45 43 I10 Intron 0 7.72 5.33 5.05 12.40 11.32 6.63 9.54 11.32 10.79 15.02 2.34 7.98 17.21 4.31 3.92 7.62 3.89 3.41 3.49 8.85 3.03 6.58 5.75 44 I10_SR1 SilentIntronRegion 0 7.52 5.33 4.82 12.11 10.85 6.62 9.43 11.04 10.81 14.77 2.32 7.68 16.89 4.25 3.95 7.84 3.60 3.40 3.31 8.84 2.94 6.63 5.83 45 I10_AR1 ActiveIntronRegion 0 10.57 5.35 8.19 16.58 17.86 6.74 11.09 15.22 10.57 18.56 2.68 12.19 21.81 5.24 3.49 4.69 7.89 3.49 6.08 9.05 4.33 5.97 4.66 46 E11_Aa NovelBoundary 0 23.86 12.10 13.04 27.80 11.46 0.00 3.89 25.92 14.67 35.70 2.00 6.30 21.59 7.24 11.25 12.82 3.65 0.00 4.52 5.56 0.00 5.27 10.93 47 ER11a ExonRegion 0 24.97 4.89 13.12 20.23 42.60 26.42 21.85 30.09 42.92 27.56 61.25 52.29 81.64 97.35 32.82 52.66 80.87 13.92 18.96 27.63 78.99 82.36 43.22 48 E11_Da NovelBoundary 0 3.11 14.34 8.69 23.77 11.88 7.95 14.75 17.25 16.81 16.04 0.00 7.65 0.00 2.47 0.00 8.54 0.00 1.87 4.33 4.99 0.00 8.51 8.11 49 E11a_E13a KnownJunction 0 12.22 2.76 13.63 26.10 70.97 18.28 15.06 18.69 50.32 32.15 41.22 61.52 77.27 92.41 41.54 51.95 52.55 5.35 13.37 19.75 65.79 54.50 39.27 50 E11a_E14a KnownJunction 0 3.70 0.00 4.29 0.00 0.00 10.79 4.28 6.53 4.80 4.49 4.95 17.71 20.29 10.71 5.44 4.02 24.12 0.00 7.34 5.18 13.78 22.84 4.10 51 I11 Intron 0 3.89 6.22 2.98 24.86 18.01 4.86 10.53 12.09 8.26 12.55 1.18 7.59 11.65 2.75 3.66 3.03 4.71 2.06 2.60 4.34 0.90 2.55 5.99 52 I11_AR1 ActiveIntronRegion 0 3.92 6.27 3.00 25.06 18.16 4.90 10.62 12.18 8.33 12.65 1.19 7.63 11.74 2.77 3.69 3.06 4.75 2.08 2.62 4.38 0.91 2.57 6.03 53 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E13_Aa NovelBoundary 0 0.00 3.03 5.74 33.43 3.82 4.54 14.93 14.79 9.92 18.64 4.90 0.00 14.12 6.83 0.00 0.00 0.00 3.90 4.80 7.80 2.84 2.82 3.76 55 ER13a ExonRegion 0 25.30 13.84 19.31 34.35 39.36 30.60 28.00 29.44 71.75 56.26 52.44 56.95 46.82 87.56 41.72 42.69 55.98 14.05 17.55 26.10 58.52 75.39 41.52 56 E13_Da NovelBoundary 0 3.48 0.00 9.28 19.78 4.24 4.77 6.76 17.58 10.33 12.06 2.68 0.00 0.00 7.24 0.00 4.19 0.00 0.00 0.00 19.30 0.00 8.21 15.11 57 E13a_E14a KnownJunction 0 21.19 5.72 11.80 26.30 36.76 37.99 23.41 28.30 67.13 46.55 44.96 31.21 54.38 90.53 41.54 25.12 29.27 4.06 38.31 33.17 41.45 89.09 41.32 58 E14_Aa NovelBoundary 0 3.78 9.21 7.21 25.44 8.32 5.56 2.25 5.71 6.48 18.37 2.00 25.96 0.00 2.41 6.30 7.78 4.77 0.00 0.00 5.31 0.00 0.00 4.01 59 ER14a ExonRegion 1 24.78 18.86 24.97 44.58 72.72 40.74 34.99 58.53 68.45 66.10 33.35 114.12 106.84 65.71 39.34 33.64 39.79 7.77 11.97 25.56 16.84 121.41 30.21 60 IG22 Intergenic 0 16.99 17.69 15.15 28.54 32.52 19.57 17.86 27.85 26.94 36.57 8.34 40.30 41.57 18.74 20.14 10.89 10.64 3.92 5.10 14.35 5.39 38.53 12.52 61 IG22_AR6 ActiveIntergenicRegion 0 30.37 25.68 19.57 39.25 63.25 42.99 36.36 43.12 52.66 50.86 21.82 94.83 120.10 45.26 35.47 24.46 35.38 6.78 11.89 29.32 19.18 96.69 30.63 62 IG22_SR3 SilentIntergenicRegion 0 79.54 31.66 12.74 21.81 47.40 31.50 39.80 16.59 23.71 29.36 29.05 42.25 56.28 80.93 62.76 51.06 33.67 3.46 15.39 26.27 16.56 76.06 58.33 63 IG22_AR5 ActiveIntergenicRegion 0 34.49 35.56 35.83 44.62 71.21 37.93 25.32 65.64 55.07 60.25 12.97 76.98 79.98 28.25 45.89 15.65 9.89 3.26 6.35 20.86 5.60 90.20 16.26 64 IG22_SR2 SilentIntergenicRegion 0 2.66 7.61 6.23 16.17 8.62 3.55 7.42 7.19 6.05 16.68 1.16 9.49 3.31 3.10 2.11 3.55 0.89 1.41 1.61 3.69 0.30 0.86 2.55 65 IG22_AR4 ActiveIntergenicRegion 0 4.08 10.48 8.84 29.30 10.72 6.75 11.19 19.65 18.78 44.47 2.26 14.16 5.24 6.02 5.72 4.19 4.80 4.80 2.41 8.33 0.79 2.87 3.32 66 IG22_AR3 ActiveIntergenicRegion 0 0.00 21.35 7.78 30.32 6.69 3.48 7.68 25.58 23.47 36.24 1.93 17.97 10.08 6.50 12.48 5.65 0.50 10.16 0.00 9.26 0.00 4.58 9.84 67 IG22_AR2 ActiveIntergenicRegion 0 0.81 15.96 11.78 38.06 2.47 2.82 10.29 26.33 23.28 41.82 0.45 23.31 0.00 5.50 6.47 2.06 3.30 3.13 0.00 13.58 0.00 0.00 4.74 68 IG22_SR1 SilentIntergenicRegion 0 5.98 10.83 8.03 23.77 12.54 7.89 11.77 15.21 10.73 29.49 1.65 17.63 4.53 4.57 8.15 2.35 2.87 4.22 2.79 11.24 0.20 1.08 3.50 69 IG22_AR1 ActiveIntergenicRegion 0 3.36 4.89 6.31 16.37 7.12 7.44 4.67 7.15 7.82 19.30 1.21 3.58 1.07 2.70 4.57 0.00 0.58 4.94 1.94 8.21 0.56 0.63 2.98