Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C11orf49	Gene	0	43.78	77.99	107.56	64.50	63.05	127.91	52.86	125.28	133.80	151.95	94.36	33.09	27.59	78.92	97.23	133.72	84.91	134.29	168.91	82.51	103.14	85.95	99.54
2	395460	Transcript	0	17.96	28.31	59.39	27.70	18.27	52.54	26.70	48.33	39.86	60.98	13.30	6.24	2.05	17.07	21.54	26.56	16.98	72.65	54.97	46.81	28.97	20.88	25.99
3	278460	Transcript	0	13.26	31.38	86.60	50.98	29.29	76.04	30.56	94.51	115.33	162.73	52.01	24.76	13.15	72.87	104.58	79.55	71.62	127.47	83.67	38.48	85.75	75.32	54.72
4	378615	Transcript	0	0.00	0.00	6.53	0.00	0.00	0.00	0.00	9.49	9.20	8.43	16.06	7.05	0.00	4.77	20.03	19.14	16.92	12.31	0.00	2.81	11.37	2.57	8.45
5	378618	Transcript	0	3.97	1.84	9.83	6.45	3.36	5.30	6.20	11.55	7.20	10.58	5.59	1.28	0.69	4.58	11.69	6.46	10.36	8.93	5.17	9.89	7.23	1.88	6.36
6	ER1a	ExonRegion	1	105.27	177.16	54.62	35.20	108.03	239.19	108.34	66.06	70.34	88.15	87.58	3.16	8.45	59.84	79.86	309.73	93.92	175.66	376.27	84.94	89.09	104.13	282.63
7	E1a_E2a	KnownJunction	1	40.16	98.47	88.44	52.97	59.34	66.27	29.63	119.44	120.37	143.82	29.48	6.30	6.82	4.71	35.73	56.48	35.62	152.38	167.06	48.64	41.21	54.01	65.64
8	ER2a	ExonRegion	0	34.38	39.88	69.66	44.23	29.33	37.73	19.51	97.85	106.69	142.34	122.60	25.05	17.85	41.60	44.14	67.03	126.88	90.15	121.88	80.54	115.51	56.58	70.28
9	E2a_E3a	KnownJunction	1	38.01	35.85	161.59	102.82	41.43	71.66	34.54	186.39	224.39	261.72	192.05	68.42	12.99	147.45	148.59	170.04	170.17	213.78	362.08	209.78	138.63	179.41	204.70
10	E3_Aa	NovelBoundary	0	44.01	18.75	2.28	6.93	25.21	5.28	8.79	7.27	9.14	3.87	0.00	0.00	13.64	0.00	32.26	13.07	0.00	4.52	0.00	6.46	8.65	0.00	0.00
11	ER3a	ExonRegion	0	45.64	96.28	132.26	95.94	175.80	231.16	102.86	203.32	205.22	215.55	146.16	80.67	53.02	122.90	162.54	397.92	140.60	268.69	501.24	139.17	126.39	173.66	330.76
12	E3a_E4a	KnownJunction	0	35.41	180.36	154.52	118.27	239.13	493.92	182.04	207.63	248.93	229.94	148.62	92.88	91.71	105.01	204.59	166.88	147.26	196.07	217.98	124.45	144.25	205.74	195.74
13	I3_AR1	ActiveIntronRegion	0	7.04	6.31	0.00	12.97	22.28	0.00	6.68	3.65	4.18	2.81	3.34	8.80	10.38	2.35	10.69	4.17	5.38	1.93	2.68	7.98	1.02	3.25	0.99
14	I3_SR5	SilentIntronRegion	0	12.18	5.05	3.46	9.69	11.70	1.44	15.86	10.04	8.74	11.09	1.59	3.91	9.05	1.11	9.14	9.68	4.95	8.47	14.70	8.98	8.12	2.57	11.91
15	I3_AR12	ActiveIntronRegion	0	4.57	5.77	4.39	6.81	2.59	6.86	13.24	3.74	11.08	10.29	0.94	5.59	15.89	0.42	7.58	12.46	7.03	3.64	1.95	6.52	13.65	5.44	14.40
16	I3_SR8	SilentIntronRegion	0	3.96	7.66	3.60	6.53	4.56	1.62	12.54	14.25	8.04	12.15	1.40	18.07	7.54	1.82	4.16	12.94	10.61	9.06	11.36	6.79	5.16	3.01	16.08
17	I3_AR19	ActiveIntronRegion	0	4.93	6.22	2.39	20.12	8.58	4.81	16.40	9.76	7.24	7.72	1.41	9.46	9.13	0.63	3.03	3.46	2.89	5.49	5.57	3.42	4.50	1.52	4.28
18	I3_SR11	SilentIntronRegion	0	4.81	6.43	3.82	17.26	6.93	5.91	13.71	7.50	7.86	8.77	2.20	5.73	4.58	1.13	4.26	6.32	4.15	7.41	7.12	6.11	6.36	3.99	8.88
19	I3_AR20	ActiveIntronRegion	0	10.36	16.54	5.84	27.05	8.94	6.99	18.13	8.43	9.65	13.80	2.51	7.55	3.29	0.65	8.19	6.70	8.71	8.49	5.83	6.78	6.91	7.84	10.50
20	I3_SR12	SilentIntronRegion	0	9.33	13.77	10.07	34.69	13.32	10.49	18.09	18.06	10.42	11.63	4.88	6.29	6.19	1.70	4.89	8.37	7.78	10.77	6.35	7.80	9.00	10.49	14.11
21	I3_AR21	ActiveIntronRegion	0	8.85	11.79	5.87	27.01	12.82	9.30	19.20	19.27	13.96	19.67	4.79	6.42	7.90	1.60	5.88	9.15	9.06	11.91	7.88	10.17	8.34	8.35	10.45
22	E4_Aa	NovelBoundary	0	10.82	11.91	3.49	14.62	11.46	10.22	30.25	20.66	12.64	26.30	0.00	0.00	6.49	0.00	0.00	8.72	0.00	6.55	9.22	3.26	6.24	7.72	3.50
23	ER4a	ExonRegion	0	37.87	243.38	178.73	125.43	141.97	322.08	121.18	229.32	250.29	262.20	181.58	102.58	68.47	124.77	172.23	185.64	166.79	203.97	213.61	138.35	162.79	169.87	117.26
24	E4_Da	NovelBoundary	0	6.89	39.73	19.31	32.40	24.45	2.44	4.24	17.91	17.27	24.42	0.00	6.30	0.00	12.13	10.75	0.00	8.98	16.50	4.61	17.19	5.50	8.08	11.44
25	E4a_E5a	KnownJunction	0	60.97	284.82	211.88	106.35	115.87	157.01	53.75	263.00	287.06	282.94	251.33	75.02	61.85	119.25	170.72	108.43	182.70	180.20	153.70	98.69	198.80	136.67	70.60
26	I4	Intron	0	8.06	11.95	13.94	21.15	11.03	10.01	14.51	17.34	16.00	17.26	4.33	6.18	5.50	3.71	5.73	11.54	7.60	18.92	16.78	16.43	9.61	5.37	13.19
27	I4_AR1	ActiveIntronRegion	0	9.40	27.04	15.62	28.14	19.85	8.13	17.25	13.31	15.61	18.23	4.06	7.92	3.97	3.19	5.42	8.58	7.35	14.31	17.58	17.27	9.03	6.78	7.49
28	I4_AR2	ActiveIntronRegion	0	12.81	15.09	9.48	18.36	13.38	0.00	8.15	13.01	7.35	7.00	0.81	4.33	8.64	3.59	7.18	4.07	3.82	8.46	15.76	20.38	3.71	2.08	13.60
29	I4_SR1	SilentIntronRegion	0	7.85	12.07	13.71	20.61	9.88	8.91	14.11	15.74	15.27	16.39	3.82	5.78	5.01	3.03	4.71	11.84	7.00	18.74	17.23	15.98	8.71	5.00	13.48
30	I4_AR3	ActiveIntronRegion	0	3.67	7.53	15.85	18.95	6.27	8.30	7.25	19.56	14.23	16.88	4.11	10.68	7.04	5.22	5.48	7.80	5.79	20.53	13.93	17.60	11.14	3.65	11.65
31	I4_AR4	ActiveIntronRegion	0	3.06	6.55	11.30	27.71	19.62	12.84	17.21	27.66	18.39	19.62	8.16	9.62	9.38	3.25	2.26	11.89	1.83	35.72	18.76	18.44	19.83	0.93	18.60
32	I4_SR2	SilentIntronRegion	0	6.14	8.48	12.41	17.70	12.39	15.13	15.41	22.07	13.48	16.14	4.69	2.81	6.50	4.85	7.47	9.11	8.69	17.37	14.35	12.93	10.88	5.05	12.78
33	I4_AR5	ActiveIntronRegion	0	9.18	13.60	20.86	28.96	32.25	20.48	16.06	27.90	30.91	22.51	10.79	7.08	2.07	8.56	13.90	19.57	12.73	15.24	16.92	26.11	11.82	16.24	13.27
34	I4_SR3	SilentIntronRegion	0	16.35	12.47	18.94	33.17	18.70	16.43	20.55	29.96	28.98	31.44	9.23	14.26	10.01	8.81	13.82	15.68	13.42	27.83	19.98	26.27	17.02	9.57	16.82
35	I4_AR6	ActiveIntronRegion	0	8.36	2.38	13.72	20.58	3.98	2.86	21.02	22.93	30.70	23.11	11.31	9.40	13.84	2.30	13.09	13.77	16.26	30.83	19.73	19.36	18.81	10.72	10.82
36	I4_SR4	SilentIntronRegion	0	9.46	9.31	5.11	12.72	8.65	8.35	17.24	8.66	16.62	9.10	3.53	3.74	3.94	5.33	7.31	12.55	8.15	11.43	2.12	17.65	12.73	3.65	4.93
37	E5_Aa	NovelBoundary	0	10.37	11.84	13.13	29.97	31.83	36.29	28.04	16.06	26.50	23.40	13.74	5.85	6.82	14.77	4.45	26.57	25.71	30.63	24.00	28.25	19.65	8.27	19.72
38	ER5a	ExonRegion	0	59.88	149.07	185.87	102.60	97.45	132.48	60.98	219.73	253.87	263.88	191.81	103.86	76.02	133.61	152.08	222.84	149.50	212.75	210.72	109.72	170.33	148.22	109.44
39	E5_Da	NovelBoundary	0	17.34	2.50	32.35	24.24	4.33	32.82	16.30	23.78	16.75	23.16	2.68	11.40	0.00	4.71	4.82	8.37	8.51	29.47	3.58	18.79	5.68	6.25	21.17
40	E5a_E6a	KnownJunction	0	72.31	91.23	228.50	132.45	91.00	146.51	63.46	302.96	293.92	297.42	131.03	105.63	73.53	166.23	169.23	206.87	129.87	290.88	333.84	118.76	148.39	254.85	101.41
41	I5	Intron	0	8.71	9.71	15.10	19.63	14.23	10.39	15.98	24.89	16.07	20.10	6.75	7.38	4.87	6.13	7.11	14.65	9.48	20.93	10.51	14.95	8.97	5.18	10.60
42	I5_AR1	ActiveIntronRegion	0	11.57	10.13	17.82	20.15	14.93	14.26	16.34	27.37	17.39	17.78	6.70	7.55	8.14	6.24	9.34	16.35	8.19	18.50	13.69	14.97	13.42	4.21	12.17
43	I5_SR1	SilentIntronRegion	0	7.00	9.50	13.51	19.40	13.87	8.09	15.85	23.50	15.35	21.60	6.82	7.31	2.90	6.10	5.79	13.69	10.31	22.50	8.62	15.01	6.31	5.79	9.69
44	ER6a	ExonRegion	0	96.61	104.22	180.94	83.41	67.03	139.86	64.17	196.43	218.99	238.56	145.81	56.50	68.46	132.00	150.42	171.79	136.25	219.43	225.23	123.37	160.25	143.02	99.13
45	E6a_E7a	KnownJunction	0	121.58	184.44	181.72	67.79	135.14	291.54	71.01	236.96	238.13	269.40	198.05	95.28	80.19	167.05	197.79	257.80	197.38	226.79	387.87	131.86	209.43	141.63	170.13
46	ER7a	ExonRegion	0	63.51	120.78	146.25	68.53	90.27	232.64	78.55	179.27	191.04	212.49	153.72	42.74	35.73	143.96	103.57	154.39	122.79	207.27	229.90	100.52	173.65	131.68	117.60
47	E7_Da	NovelBoundary	0	10.00	6.25	22.50	18.18	12.65	19.53	7.60	30.03	13.60	26.67	5.37	0.00	6.98	4.77	12.61	16.32	9.54	41.74	25.41	26.21	8.90	8.08	32.44
48	E7a_E8a	KnownJunction	0	69.86	151.16	175.98	67.62	128.86	309.82	82.14	185.57	174.97	202.11	174.41	55.07	33.11	116.96	83.44	182.60	103.23	217.05	205.94	95.43	164.08	129.14	106.45
49	I7	Intron	0	12.39	15.14	18.77	21.26	16.03	17.69	17.93	21.87	21.60	25.22	7.33	3.79	3.77	8.05	12.18	17.39	9.25	20.60	24.25	21.98	10.72	9.50	17.59
50	I7_AR1	ActiveIntronRegion	0	5.15	12.10	22.39	16.53	9.75	15.62	14.16	19.73	19.89	27.81	6.57	3.99	3.44	8.83	14.15	20.93	11.25	18.29	38.29	24.54	12.85	11.13	19.61
51	I7_AR2	ActiveIntronRegion	0	3.29	14.68	6.76	11.68	16.72	9.74	20.77	17.53	12.24	8.76	16.68	7.50	2.47	9.48	13.67	18.45	18.92	10.69	10.15	7.11	14.47	8.70	10.75
52	I7_SR2	SilentIntronRegion	0	27.90	13.72	21.37	28.47	23.67	20.22	22.81	28.63	23.34	19.12	8.07	8.07	3.58	9.88	8.78	18.64	2.28	26.04	28.35	23.23	8.85	16.80	32.25
53	I7_AR3	ActiveIntronRegion	0	19.60	22.44	24.27	31.07	22.46	23.61	22.62	28.74	31.70	38.10	7.76	4.67	3.16	8.68	12.42	21.97	8.71	27.51	23.87	27.76	12.98	10.16	19.28
54	E8_Aa	NovelBoundary	0	33.12	17.96	35.16	32.66	11.29	25.61	20.45	35.16	35.65	49.24	4.63	12.60	0.00	4.77	10.14	27.77	4.68	32.71	37.08	35.92	18.16	17.88	27.32
55	ER8a	ExonRegion	0	64.49	89.19	155.05	76.19	87.71	187.59	55.07	153.99	168.50	187.86	117.64	53.78	48.88	116.18	138.76	158.54	115.22	176.14	175.84	97.27	179.53	82.33	93.74
56	E8_Da	KnownBoundary	0	22.97	20.00	81.31	28.37	11.12	23.51	10.25	69.58	62.33	70.24	14.79	0.00	0.00	14.83	13.35	21.19	16.64	69.52	23.81	46.66	30.09	11.70	16.90
57	E8a_E8b	KnownJunction	0	0.00	0.00	6.53	0.00	0.00	0.00	0.00	9.49	9.20	8.43	16.06	7.05	0.00	4.77	20.03	19.14	16.92	12.31	0.00	2.81	11.37	2.57	8.45
58	E8a_E8c	KnownJunction	0	13.26	31.38	86.60	50.98	29.29	76.04	30.56	94.51	115.33	162.73	52.01	24.76	13.15	72.87	104.58	79.55	71.62	127.47	83.67	38.48	85.75	75.32	54.72
59	E8a_E9a	KnownJunction	0	3.56	0.00	7.10	1.66	0.00	0.00	4.50	4.76	1.22	6.26	5.26	0.00	0.00	0.00	8.90	4.10	8.79	0.00	0.00	6.39	3.15	0.00	0.00
60	ER8b	ExonRegion	0	17.96	28.31	59.39	27.70	18.27	52.54	26.70	48.33	39.86	60.98	13.30	6.24	2.05	17.07	21.54	26.56	16.98	72.65	54.97	46.81	28.97	20.88	25.99
61	E8_Ab	KnownBoundary	0	16.60	46.77	29.04	17.51	20.20	38.05	45.18	39.84	27.46	33.42	10.42	0.00	12.66	19.31	18.54	29.99	12.06	65.08	53.74	34.20	27.06	29.02	20.40
62	E8_Ac	KnownBoundary	0	24.08	19.40	37.34	27.37	12.82	42.13	17.44	33.97	28.82	36.37	18.00	17.26	13.31	17.07	45.37	56.91	38.15	68.90	39.53	11.89	11.49	15.49	40.55
63	ER8c	ExonRegion	0	20.22	40.45	49.83	34.60	21.85	47.98	34.72	60.21	50.16	64.74	26.95	15.15	13.55	29.96	44.00	72.49	42.18	106.55	63.53	30.50	39.05	33.92	44.87
64	ER8d	ExonRegion	0	37.21	65.47	126.25	82.61	56.72	125.75	48.46	143.41	156.14	179.09	100.15	28.03	23.62	90.41	120.94	115.94	81.35	121.39	143.68	87.75	115.12	87.55	80.93
65	E8_Db	NovelBoundary	0	13.85	11.91	26.64	47.91	12.48	12.61	20.27	35.04	48.49	25.57	2.68	6.00	7.30	9.24	4.45	18.80	8.42	14.80	8.38	19.62	16.68	11.33	20.91
66	I8	Intron	0	9.03	12.57	12.67	18.87	14.75	15.41	16.13	24.17	21.03	20.22	5.68	4.58	3.88	4.10	9.12	9.65	13.36	19.08	17.70	15.80	8.62	4.54	13.45
67	I8_SR1	SilentIntronRegion	0	9.07	12.61	12.71	18.93	14.80	15.46	16.18	24.25	21.10	20.29	5.70	4.60	3.90	4.12	9.15	9.68	13.40	19.14	17.77	15.85	8.65	4.56	13.50
68	E9_Aa	NovelBoundary	0	3.78	0.00	14.52	23.04	7.72	11.24	4.20	12.45	13.60	29.04	4.63	0.00	0.00	2.47	10.75	10.94	4.58	25.00	9.41	11.25	11.31	0.00	7.34
69	ER9a	ExonRegion	0	4.37	3.67	12.57	11.23	6.73	10.60	7.89	18.34	13.19	14.90	5.92	2.56	1.39	9.17	14.49	8.82	11.94	17.86	10.33	13.38	11.31	3.76	12.72