Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IMMP1L Gene 0 24.17 65.75 63.49 71.40 69.86 83.87 67.95 69.73 52.30 74.88 49.23 40.08 24.76 37.63 70.08 39.46 44.47 25.60 57.42 50.50 7.35 13.10 9.23 2 278200 Transcript 0 22.63 49.76 64.54 70.76 59.06 61.24 57.81 66.98 51.01 69.19 44.55 33.12 23.76 34.97 70.32 37.83 38.09 25.91 61.19 44.48 5.58 12.91 9.92 3 ER1a ExonRegion 1 58.81 220.15 47.25 58.47 205.05 291.56 203.72 39.54 36.82 41.08 62.37 1.91 0.45 69.48 121.38 104.91 79.03 40.19 135.41 94.78 20.53 22.38 25.81 4 E1a_E2a KnownJunction 0 3.33 2.50 10.53 6.73 4.33 2.44 23.85 9.00 7.93 7.74 7.26 0.00 0.00 7.48 5.19 0.00 0.00 20.48 4.05 0.00 0.00 0.00 0.00 5 E1a_E3a NovelJunction 0 3.19 6.58 27.97 30.10 12.65 0.00 1.81 8.17 18.98 16.47 17.69 0.00 6.66 0.00 4.45 0.00 17.95 22.72 20.14 3.26 0.00 0.00 0.00 6 E1a_E6a NovelJunction 0 0.00 8.42 65.49 53.64 18.59 7.55 4.33 76.11 102.14 58.02 13.69 0.00 6.82 0.00 15.58 0.00 8.51 22.30 21.18 5.88 0.00 6.12 0.00 7 I1_AR6 ActiveIntronRegion 0 4.21 8.48 9.63 12.69 7.17 1.61 9.73 11.87 6.38 4.61 4.99 1.94 4.58 5.03 3.13 2.72 12.63 8.13 2.68 10.09 0.43 0.00 1.97 8 I1_AR8 ActiveIntronRegion 0 0.81 16.27 6.32 11.53 13.17 3.67 6.62 1.20 8.27 2.29 3.87 18.98 18.76 3.25 0.00 2.97 6.60 0.00 5.88 2.13 0.00 0.00 0.00 9 E2_Aa NovelBoundary 1 3.78 0.00 1.74 10.59 8.49 0.00 3.40 4.81 7.29 3.76 0.00 24.61 7.47 0.00 0.00 0.00 0.00 2.45 9.41 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.60 3.84 3.40 2.90 3.82 1.16 9.08 4.09 4.88 3.75 5.00 3.30 15.34 1.80 2.21 5.10 3.30 6.01 8.54 0.34 0.00 0.17 0.19 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 1.72 1.77 2.92 2.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E3_Aa NovelBoundary 1 3.04 12.10 5.82 7.06 0.00 20.22 14.31 6.00 11.72 16.01 2.68 0.00 36.36 0.00 4.45 0.00 12.81 0.00 11.95 21.09 0.00 0.00 4.01 13 ER3a ExonRegion 0 10.20 38.50 38.55 40.37 26.74 12.84 33.44 26.06 33.86 42.88 42.26 18.48 13.44 30.24 42.87 29.30 42.00 25.95 55.34 30.33 3.45 7.46 9.95 14 E3_Da NovelBoundary 0 0.00 2.63 0.00 1.30 0.00 2.90 12.14 7.02 6.83 5.32 0.00 6.30 6.82 2.59 4.45 0.00 0.00 0.00 4.33 19.24 0.00 0.00 3.50 15 E3a_E4a KnownJunction 0 58.45 61.83 70.13 86.14 82.00 73.99 116.06 45.43 51.16 55.17 46.91 24.61 38.31 42.44 147.48 93.82 47.69 37.60 154.45 28.89 11.24 15.80 26.38 16 E3a_E6a NovelJunction 1 0.00 3.16 20.14 15.22 0.00 8.12 6.36 12.36 8.07 11.17 22.27 0.00 0.00 11.71 67.50 35.80 8.51 14.34 8.85 20.84 0.00 2.76 0.00 17 ER4a ExonRegion 0 24.49 34.02 47.18 64.88 73.54 63.98 97.72 42.76 33.88 64.08 40.11 41.30 43.00 34.34 65.20 41.98 27.63 28.42 58.05 36.19 4.90 6.48 8.38 18 E4a_E5a KnownJunction 0 21.41 28.55 38.59 49.84 74.70 64.39 71.32 43.09 20.28 46.36 28.43 35.11 41.07 19.07 40.67 19.74 36.00 15.05 22.78 34.71 0.00 2.94 7.68 19 E5_Aa NovelBoundary 0 0.00 13.02 6.24 3.53 4.33 0.00 15.59 12.65 3.41 14.75 2.21 0.00 14.45 0.00 4.45 4.36 22.25 1.99 0.00 6.14 0.00 2.39 0.00 20 ER5a ExonRegion 0 23.33 47.86 45.06 58.64 58.38 57.44 61.66 64.96 39.36 80.33 43.60 67.67 55.06 36.63 70.13 23.73 42.37 15.77 31.70 42.77 3.54 13.52 3.33 21 E5_Da NovelBoundary 1 0.00 2.83 1.12 3.73 7.56 0.00 8.66 16.59 12.56 24.85 0.00 23.41 26.78 7.42 0.00 0.00 8.79 2.11 4.80 17.26 0.00 0.00 4.10 22 E5a_E6a KnownJunction 0 11.19 23.68 55.88 58.77 31.58 18.68 18.02 45.76 35.65 53.37 15.06 24.16 13.64 18.72 56.37 10.85 21.60 6.84 9.04 21.86 0.00 0.00 3.93 23 I5 Intron 0 6.33 17.75 8.68 24.43 13.08 6.00 29.81 13.49 10.73 15.20 5.34 17.41 11.13 6.13 4.02 5.57 6.15 6.89 7.92 16.36 0.77 2.75 2.54 24 I5_SR1 SilentIntronRegion 0 2.25 4.41 2.43 6.21 4.29 1.66 14.05 11.45 9.99 9.59 2.71 15.89 7.40 2.77 2.93 3.85 3.30 3.42 3.01 9.21 0.48 0.45 1.21 25 I5_AR1 ActiveIntronRegion 0 2.75 6.32 4.73 17.49 4.42 1.47 18.49 7.70 7.99 14.13 10.78 28.07 15.84 7.06 3.49 9.78 7.86 5.59 9.76 20.18 1.84 2.13 5.18 26 I5_AR4 ActiveIntronRegion 0 2.36 9.78 4.94 13.29 8.31 4.45 23.70 9.33 9.56 10.96 9.23 10.59 9.07 7.86 4.07 7.65 8.45 9.13 9.41 17.27 1.38 1.90 1.84 27 I5_SR3 SilentIntronRegion 0 2.60 16.24 9.42 26.00 9.99 5.08 25.93 3.75 6.88 9.11 7.00 11.12 7.74 6.58 3.45 4.52 7.21 5.47 5.43 9.39 0.00 2.81 2.66 28 I5_AR5 ActiveIntronRegion 0 2.46 11.97 6.33 24.64 9.38 2.76 25.05 11.37 9.95 13.06 3.65 16.67 11.88 6.40 4.62 3.37 3.24 6.67 7.64 16.87 0.85 2.55 1.00 29 I5_SR4 SilentIntronRegion 0 4.70 12.96 5.59 15.84 5.21 4.92 29.24 6.98 6.86 16.19 4.39 12.11 11.63 5.94 6.08 3.80 6.16 4.62 11.85 14.22 0.48 1.90 1.94 30 I5_AR6 ActiveIntronRegion 0 5.67 24.35 9.16 28.11 14.63 6.53 43.34 9.48 7.98 16.17 6.95 21.20 15.99 9.37 3.07 6.02 10.47 16.60 8.64 21.86 1.19 3.12 4.74 31 I5_SR5 SilentIntronRegion 0 6.78 17.93 9.45 29.77 15.61 8.76 54.00 18.65 13.45 19.15 9.15 23.19 11.81 10.72 3.51 6.87 6.92 10.39 11.62 21.81 0.64 4.24 3.29 32 I5_AR7 ActiveIntronRegion 0 20.06 30.32 22.73 45.57 35.68 14.12 73.24 27.53 23.56 34.03 9.97 37.11 13.24 10.21 6.78 5.05 9.57 11.86 16.75 29.22 1.10 6.83 4.55 33 I5_SR6 SilentIntronRegion 0 21.98 64.60 23.31 68.37 27.16 19.18 69.13 27.48 18.37 28.13 6.78 20.42 13.69 8.76 5.31 11.82 8.90 16.46 23.20 28.46 1.82 5.67 7.83 34 I5_AR8 ActiveIntronRegion 0 17.18 51.21 26.98 68.63 33.78 12.10 54.28 32.64 14.77 32.49 4.44 21.24 14.45 5.60 7.83 6.54 8.94 6.65 10.88 20.79 0.72 4.81 4.26 35 I5_SR7 SilentIntronRegion 0 2.33 6.75 3.79 8.50 11.12 4.74 13.35 5.37 6.15 4.35 4.78 13.04 6.92 6.39 2.85 5.61 9.08 3.30 3.55 13.47 0.00 1.86 0.89 36 I5_SR8 SilentIntronRegion 0 0.00 1.36 0.00 1.36 1.90 0.00 3.70 6.12 1.49 0.19 0.00 14.79 0.78 3.52 0.00 7.55 3.99 0.69 0.00 9.66 0.00 0.00 0.00 37 I5_AR10 ActiveIntronRegion 0 0.00 2.03 0.00 1.36 5.35 0.00 7.94 10.37 1.24 0.00 1.93 25.98 4.69 3.25 0.00 11.89 6.60 1.85 0.00 18.09 0.00 0.69 0.00 38 I5_AR11 ActiveIntronRegion 0 0.00 2.57 0.23 4.14 13.43 4.22 6.82 2.77 15.85 4.35 3.03 2.37 0.00 3.31 0.99 0.00 1.56 0.00 5.05 8.07 1.95 0.83 0.00 39 I5_SR10 SilentIntronRegion 0 2.19 9.76 3.33 9.09 7.59 4.38 8.37 8.69 15.45 12.50 3.95 12.65 4.64 5.74 1.69 4.06 7.77 4.40 3.38 17.42 0.64 2.49 0.96 40 I5 Intron 0 9.07 19.02 7.43 23.18 20.82 12.83 15.76 14.32 18.31 14.46 5.03 10.11 7.55 4.78 8.63 6.04 3.67 4.34 6.65 11.83 0.84 3.33 1.75 41 I5_AR1 ActiveIntronRegion 0 5.10 21.81 6.36 18.60 11.16 6.83 10.05 9.92 17.78 12.21 6.97 10.39 6.09 4.63 3.92 5.94 1.06 5.55 10.06 13.67 0.86 2.03 1.87 42 I5_SR1 SilentIntronRegion 0 7.19 14.80 10.65 23.08 21.63 11.96 13.65 14.31 21.10 15.57 3.58 15.15 9.73 4.60 8.23 5.02 2.06 2.50 3.78 13.33 0.51 2.78 0.87 43 I5_AR2 ActiveIntronRegion 0 6.73 12.71 6.23 18.70 16.67 14.05 14.29 13.78 16.04 13.25 4.15 8.13 9.66 2.85 6.49 4.87 3.06 3.45 5.31 10.56 0.54 3.14 1.34 44 I5_SR2 SilentIntronRegion 0 14.57 25.56 7.58 32.75 30.76 15.83 22.62 16.08 21.59 16.46 6.02 10.21 5.95 7.66 13.52 6.91 7.28 6.70 7.08 11.12 1.68 4.51 2.90 45 I5_AR3 ActiveIntronRegion 0 11.84 22.86 6.99 19.64 22.89 13.59 15.89 19.30 12.66 15.00 4.09 6.59 4.49 3.45 11.13 9.27 3.37 1.75 8.40 11.71 0.00 4.08 1.23 46 E6_Aa NovelBoundary 0 3.63 28.09 15.49 23.87 32.17 21.58 32.99 42.76 21.09 39.27 10.58 12.60 0.00 5.06 15.08 0.00 8.79 4.93 4.80 23.97 0.00 3.12 0.00 47 ER6a ExonRegion 0 20.25 59.80 142.26 147.22 70.75 48.42 44.13 167.54 114.45 162.42 99.97 94.98 38.41 60.75 106.61 45.41 79.88 36.42 67.50 90.45 15.62 21.94 10.56 48 E6a_E7a KnownJunction 0 36.30 76.89 253.60 250.95 85.48 64.22 32.77 279.39 208.97 247.51 149.41 82.08 39.45 109.31 192.22 90.49 88.17 81.75 207.16 152.95 9.45 63.13 26.97 49 E7_Aa NovelBoundary 0 38.08 66.44 102.72 93.46 74.11 45.94 76.93 105.68 117.27 149.35 43.38 68.57 49.35 27.31 71.70 3.16 31.98 5.64 12.33 39.82 8.15 42.07 28.68 50 ER7a ExonRegion 0 25.75 49.28 86.61 92.97 51.37 96.99 38.02 101.35 72.99 91.88 38.72 36.92 10.70 24.40 63.84 26.48 27.49 22.38 41.51 44.96 3.73 14.05 5.80