Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DEPDC7 Gene 0 4.62 9.02 11.38 9.69 6.08 50.02 17.82 9.04 14.46 14.46 0.17 4.84 9.86 12.17 11.03 2.01 33.13 14.80 2.44 10.87 4.86 34.84 16.99 2 427755 Transcript 0 0.99 3.79 0.00 0.00 0.17 2.04 1.55 0.00 1.65 1.13 0.00 4.01 3.61 2.13 0.75 0.00 2.36 0.83 1.46 1.00 0.00 1.99 2.75 3 241051 Transcript 0 0.00 2.03 0.00 0.00 0.00 5.50 0.66 0.00 0.00 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 4 311388 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.12 0.25 0.00 0.12 0.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.35 0.00 0.13 0.28 0.00 0.19 5 ER1a ExonRegion 0 6.54 7.54 0.00 2.51 4.14 52.71 11.96 5.60 4.78 7.17 0.00 1.10 0.00 12.12 5.91 1.84 31.65 37.81 2.95 8.37 10.50 20.09 35.93 6 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.78 1.99 1.60 2.89 2.82 0.00 0.00 0.00 0.00 8.90 0.00 16.27 11.15 0.00 3.13 5.68 2.45 4.35 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.23 0.50 0.00 0.23 0.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.70 0.00 0.27 0.56 0.00 0.37 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER3a ExonRegion 0 3.33 8.57 8.78 13.28 4.79 54.27 18.41 7.51 19.74 18.23 0.76 3.78 14.92 18.19 9.77 3.13 55.87 23.71 2.57 20.43 9.99 41.53 27.59 10 E3_Da KnownBoundary 0 0.00 18.62 0.00 0.00 3.14 5.34 5.26 0.00 3.30 4.46 0.00 6.30 0.00 4.41 6.30 0.00 4.77 4.56 0.00 0.00 0.00 0.00 0.00 11 E3a_E4a KnownJunction 0 17.78 8.81 12.03 16.02 8.49 37.19 15.32 7.19 15.25 25.33 0.00 12.15 13.64 21.60 17.80 12.22 51.52 21.47 8.66 8.12 4.94 49.54 25.10 12 ER3b ExonRegion 0 0.99 3.79 0.00 0.00 0.17 2.04 1.55 0.00 1.65 1.13 0.00 4.01 3.61 2.13 0.75 0.00 2.36 0.83 1.46 1.00 0.00 1.99 2.75 13 E4_Aa NovelBoundary 0 0.00 0.00 3.43 1.73 3.57 2.90 7.38 6.41 6.51 0.00 0.00 12.60 6.82 2.41 0.00 0.00 13.28 0.00 0.00 2.88 0.00 3.06 0.00 14 ER4a ExonRegion 0 3.82 11.63 12.79 7.60 9.64 69.96 19.89 8.37 16.70 20.41 0.77 9.13 23.85 22.04 14.23 3.46 70.32 26.66 5.80 12.70 11.23 57.72 20.67 15 E4_Da NovelBoundary 0 0.00 3.29 1.83 6.03 0.00 28.79 8.35 5.50 9.75 8.00 0.00 6.60 0.00 4.94 0.00 0.00 26.65 4.23 4.14 11.95 0.00 26.39 12.98 16 E4a_E5a KnownJunction 0 3.78 9.41 13.42 6.56 7.56 49.74 10.86 7.23 2.81 10.77 0.00 6.15 20.45 10.36 13.85 0.00 30.95 20.35 4.14 2.88 15.14 27.92 15.02 17 I4 Intron 0 3.19 3.63 3.89 3.35 4.22 24.29 12.36 5.13 5.43 5.87 0.13 3.32 8.77 4.05 1.92 0.61 7.93 4.36 0.87 7.59 0.45 16.59 9.68 18 I4_AR1 ActiveIntronRegion 0 2.54 3.68 4.24 3.53 3.79 25.54 10.71 4.27 5.08 6.41 0.00 5.13 9.30 3.33 1.66 0.70 6.75 3.62 0.75 8.39 0.52 20.72 12.57 19 I4_SR1 SilentIntronRegion 0 4.14 3.58 3.40 3.11 4.86 22.69 14.75 6.37 5.97 5.13 0.32 0.79 8.07 5.11 2.31 0.49 9.66 5.45 1.06 6.51 0.37 10.86 5.64 20 E5_Aa NovelBoundary 0 0.00 0.00 1.83 1.73 4.07 42.36 18.42 2.01 10.13 6.47 0.00 0.00 6.82 6.71 4.45 0.00 7.95 1.87 0.00 11.82 0.00 12.74 16.48 21 ER5a ExonRegion 0 6.23 7.29 9.45 8.58 9.67 74.52 28.35 9.92 17.80 14.37 0.00 4.58 19.60 18.63 15.45 2.39 46.63 28.45 6.61 12.40 8.81 39.55 22.13 22 E5a_E6a KnownJunction 0 6.82 12.83 5.94 8.06 7.89 65.59 30.34 3.90 19.59 19.02 0.00 12.60 26.13 7.83 25.84 0.00 36.09 12.85 4.80 6.07 8.71 53.76 43.71 23 E6_Aa NovelBoundary 0 10.96 3.35 15.08 4.30 3.57 9.99 14.75 6.90 6.22 7.28 0.00 19.96 0.00 4.77 5.07 0.00 3.74 6.26 4.61 6.01 2.84 11.02 0.00 24 ER6a ExonRegion 0 10.94 18.48 22.49 12.56 9.58 103.91 37.75 17.82 23.01 25.77 0.00 5.29 17.88 22.13 20.62 3.70 57.41 23.82 6.61 18.92 6.41 51.50 24.42 25 E6_Da NovelBoundary 0 0.00 6.51 9.40 1.83 3.74 5.11 4.06 2.42 4.48 2.66 0.00 0.00 0.00 2.24 0.00 0.00 12.81 6.67 0.00 3.00 0.00 5.76 3.93 26 E6a_E7a KnownJunction 0 13.41 15.66 25.66 10.85 10.87 112.66 30.96 17.79 16.17 27.75 0.00 11.85 6.01 22.54 24.11 3.42 57.60 22.55 9.22 5.18 0.00 49.42 19.55 27 E7_Aa NovelBoundary 0 0.00 0.00 8.81 0.00 0.00 5.79 14.09 6.37 5.38 6.23 0.00 0.00 6.33 2.47 4.45 0.00 16.74 3.52 0.00 10.99 0.00 5.45 3.76 28 ER7a ExonRegion 0 7.61 8.19 25.65 14.71 9.94 75.74 30.82 9.49 15.23 28.70 0.00 5.15 6.26 15.12 18.26 2.81 42.73 10.88 2.16 8.18 2.65 48.88 16.02 29 E7a_E8a KnownJunction 0 10.45 14.93 32.94 18.41 16.64 90.46 42.44 14.01 18.03 30.14 0.00 12.60 12.82 19.48 18.79 3.42 37.77 8.08 0.00 8.05 3.15 67.05 24.41 30 ER8a ExonRegion 0 6.84 17.66 18.74 15.48 8.75 89.33 27.54 12.50 21.87 22.41 0.00 5.84 14.55 14.48 18.40 1.42 28.42 5.44 1.29 9.78 2.33 59.91 17.18 31 E8a_E9a KnownJunction 0 10.08 17.50 27.73 18.78 3.74 51.22 29.10 11.79 31.37 13.43 0.00 0.00 13.64 13.71 0.00 0.00 4.49 10.49 0.00 9.65 0.00 71.58 18.01 32 ER9a ExonRegion 0 9.64 20.26 25.42 23.38 9.21 64.93 23.75 17.90 23.26 20.62 0.00 19.35 13.42 14.53 24.31 3.42 34.18 9.89 0.00 15.94 0.00 58.97 15.58 33 E9_Da NovelBoundary 0 7.33 3.35 10.85 0.00 0.00 2.67 8.39 0.00 2.31 7.55 0.00 0.00 0.00 0.00 4.45 0.00 0.00 1.95 0.00 3.26 0.00 14.82 0.00 34 E9a_E10a KnownJunction 0 9.93 14.08 23.57 22.04 7.05 43.50 18.24 19.96 27.75 20.23 0.00 12.60 6.82 9.77 28.18 3.59 37.49 7.59 0.00 20.45 0.00 60.01 16.22 35 I9 Intron 0 2.20 3.53 5.07 2.11 4.18 8.27 5.05 4.47 1.28 3.26 0.00 0.62 4.69 0.86 1.48 0.00 2.29 0.96 0.00 2.58 0.76 9.04 2.04 36 I9_SR1 SilentIntronRegion 0 2.52 3.88 6.00 2.13 2.98 8.41 5.07 4.65 1.22 3.94 0.00 0.79 4.30 0.83 1.90 0.00 2.18 1.23 0.00 3.32 0.49 10.26 2.05 37 E10_Aa NovelBoundary 0 0.00 6.58 19.04 4.13 3.23 0.00 5.26 4.11 8.77 2.63 0.00 12.60 0.00 0.00 0.00 0.00 4.30 0.00 0.00 9.14 0.00 10.90 0.00 38 ER10a ExonRegion 0 4.03 11.46 19.32 16.36 9.02 33.90 16.23 17.51 21.48 15.13 0.00 8.58 5.58 6.46 13.06 1.54 16.82 2.40 0.00 10.71 0.00 44.67 11.39 39 ER10b ExonRegion 0 0.00 2.03 0.00 0.00 0.00 5.50 0.66 0.00 0.00 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00