Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ACCS Gene 0 57.42 0.69 27.08 7.76 9.68 12.40 7.93 14.32 26.47 7.07 59.64 19.02 20.61 32.72 33.29 4.10 11.12 9.06 14.91 0.14 114.21 20.82 36.25 2 448099 Transcript 0 2.13 0.00 0.00 0.00 0.00 1.31 0.91 0.17 0.00 0.27 0.56 0.00 0.00 1.24 0.55 0.00 3.11 0.00 2.02 0.00 1.34 0.27 3.67 3 263776 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 432284 Transcript 0 0.00 0.00 3.16 0.00 0.00 0.00 2.12 4.60 1.74 0.00 0.00 6.30 0.00 5.24 0.00 0.00 0.00 0.00 0.00 0.00 13.53 0.00 0.00 5 ER1a ExonRegion 0 0.48 0.00 0.00 0.00 0.00 0.00 0.00 0.35 0.00 0.55 1.13 0.00 0.00 0.00 1.11 0.00 2.00 0.00 0.00 0.00 2.68 0.55 0.00 6 E1_Ab KnownBoundary 0 3.48 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.02 3.67 7 ER1b ExonRegion 0 3.85 0.00 0.94 0.00 1.52 1.10 2.85 2.97 1.42 1.47 5.03 0.00 0.00 7.80 14.75 0.00 6.33 2.49 6.85 0.00 0.55 2.78 8.76 8 E1_Da KnownBoundary 0 3.63 0.00 5.62 0.00 4.07 0.00 1.99 2.55 3.53 1.67 4.37 0.00 0.00 20.07 30.41 0.00 4.68 5.14 11.86 0.00 2.84 0.00 7.60 9 E1a_E2a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 2.61 1.81 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.21 0.00 4.05 0.00 0.00 0.00 7.34 10 ER1c ExonRegion 0 8.97 0.27 6.48 1.58 5.16 7.31 4.58 7.67 8.05 3.28 20.54 2.88 3.34 20.97 9.01 1.78 4.58 5.52 6.21 0.00 60.71 13.76 38.53 11 E1b_E2a KnownJunction 0 11.26 0.00 9.79 5.49 0.00 18.63 14.04 9.12 21.87 4.41 51.96 0.00 0.00 33.14 4.45 7.09 12.72 11.81 12.33 0.00 119.04 36.86 35.51 12 ER2a ExonRegion 0 21.88 0.37 20.58 5.79 9.87 10.06 6.96 12.83 30.57 5.86 67.46 18.26 14.36 40.20 22.59 4.00 18.64 11.93 17.71 0.00 153.52 27.11 49.30 13 E2a_E3a KnownJunction 0 30.52 0.00 21.55 9.69 8.49 10.22 0.00 15.98 38.25 13.19 85.60 18.31 33.44 45.44 34.24 0.00 13.84 20.52 18.35 0.00 201.15 28.96 46.61 14 E2a_E5a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.89 1.50 0.00 0.00 0.00 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 7.66 3.06 0.00 15 ER3a ExonRegion 0 25.01 1.66 18.58 6.22 8.56 7.18 3.02 14.37 26.12 8.18 68.10 37.74 37.13 27.99 26.30 2.38 8.64 8.38 19.64 0.00 170.27 30.18 42.43 16 E3a_E4a KnownJunction 0 13.19 0.00 16.76 6.53 23.43 4.94 1.94 18.36 18.14 1.24 38.54 47.72 6.82 11.42 27.32 0.00 13.09 2.11 4.61 0.00 108.73 30.86 19.97 17 E3a_E5a KnownJunction 0 0.00 0.00 3.16 0.00 0.00 0.00 2.12 4.60 1.74 0.00 0.00 6.30 0.00 5.24 0.00 0.00 0.00 0.00 0.00 0.00 13.53 0.00 0.00 18 E4_Aa NovelBoundary 0 7.33 0.00 7.98 1.86 0.00 5.62 4.24 0.00 5.09 0.00 15.27 0.00 13.64 16.48 9.64 4.36 3.93 4.44 4.61 0.00 19.95 2.57 8.71 19 ER4a ExonRegion 1 17.59 0.00 17.90 3.13 11.53 5.94 7.74 6.45 21.88 5.46 72.85 16.77 49.67 34.95 19.04 3.39 15.44 8.43 17.90 0.00 144.89 21.66 45.91 20 E4a_E5a KnownJunction 0 27.41 0.00 28.53 4.86 4.33 7.38 11.97 2.05 37.73 10.26 80.44 13.20 33.28 41.79 19.28 4.36 26.83 18.78 22.59 0.00 164.33 32.33 55.57 21 ER5a ExonRegion 0 33.77 0.00 20.88 8.66 8.14 14.17 8.44 18.30 42.33 10.99 97.14 24.80 22.45 55.01 24.49 9.94 16.98 13.15 21.52 1.55 200.38 29.53 63.26 22 E5a_E6a KnownJunction 0 33.93 0.00 20.46 9.66 18.76 19.02 6.40 24.07 40.57 8.43 87.07 20.26 13.31 37.50 34.61 8.37 0.00 3.65 8.47 0.00 194.54 29.33 66.50 23 ER6a ExonRegion 0 20.38 0.00 18.98 8.38 8.71 11.52 3.56 12.74 24.98 6.27 53.49 20.16 24.50 27.61 33.73 1.86 23.06 3.47 12.12 0.00 136.14 16.36 37.43 24 E6_Da NovelBoundary 0 0.00 0.00 1.83 0.00 0.00 2.90 4.20 7.64 5.87 5.59 7.48 0.00 7.79 7.42 8.90 3.76 4.77 4.73 8.66 0.00 15.01 13.78 8.71 25 E6a_E7a KnownJunction 0 13.48 0.00 25.55 6.46 0.00 11.19 0.00 6.20 11.98 5.53 40.75 6.00 20.45 22.19 20.40 0.00 4.58 3.81 8.85 0.00 79.14 3.06 50.88 26 I6 Intron 0 0.86 0.21 3.14 0.41 1.08 3.53 1.88 2.09 6.71 1.56 12.52 13.19 10.83 9.51 3.94 0.30 6.68 4.09 4.19 0.22 20.95 8.22 7.43 27 I6_AR1 ActiveIntronRegion 0 0.00 0.52 1.86 1.04 0.68 4.67 2.70 3.94 7.99 0.87 17.24 4.55 5.91 8.62 5.14 0.76 10.10 4.21 0.81 0.54 28.64 11.15 11.23 28 I6_SR1 SilentIntronRegion 0 1.42 0.00 4.01 0.00 1.36 2.79 1.34 0.87 5.91 2.02 9.47 19.01 14.16 10.16 3.17 0.00 4.46 4.03 6.46 0.00 16.00 6.33 4.96 29 E7_Aa NovelBoundary 0 13.34 0.00 5.26 3.73 4.24 8.06 4.06 4.07 20.37 6.77 21.53 6.30 0.00 9.65 0.00 0.00 4.11 4.64 11.67 0.00 53.25 7.96 20.40 30 ER7a ExonRegion 0 29.03 0.00 18.94 4.45 9.23 10.16 7.58 5.17 17.25 8.58 63.83 9.10 19.24 41.17 15.75 4.25 11.65 5.45 18.46 0.00 121.86 12.31 30.60 31 E7_Da NovelBoundary 0 13.19 0.00 18.45 3.86 3.90 16.64 6.49 8.83 25.81 6.34 37.01 5.70 0.00 28.96 13.35 0.00 16.83 11.23 4.42 0.00 108.48 16.90 20.15 32 E7a_E8a KnownJunction 0 36.60 0.00 6.80 3.06 3.48 5.62 0.00 8.75 7.58 2.58 32.96 6.30 41.39 33.20 19.66 15.30 9.35 4.31 3.58 0.00 69.50 11.51 26.80 33 I7 Intron 0 14.99 0.22 13.53 1.77 5.54 11.39 4.61 8.14 19.05 5.77 29.07 14.85 14.58 23.80 10.01 1.30 6.83 8.61 16.67 0.00 83.80 12.49 34.56 34 I7_AR1 ActiveIntronRegion 0 15.06 0.22 13.59 1.78 5.56 11.44 4.63 8.17 19.14 5.80 29.19 14.91 14.64 23.91 10.05 1.30 6.86 8.64 16.74 0.00 84.15 12.54 34.71 35 E8_Aa NovelBoundary 0 27.86 0.00 16.62 5.99 8.23 23.05 6.58 12.45 25.55 8.86 35.54 12.45 6.82 12.36 13.23 8.72 4.21 12.97 29.93 0.00 131.52 28.60 47.29 36 ER8a ExonRegion 0 24.53 0.00 7.73 2.24 11.18 5.24 5.81 7.69 12.67 1.78 45.35 7.38 31.51 31.55 19.79 4.34 4.40 3.72 15.72 0.00 96.06 12.85 30.27 37 E8_Da NovelBoundary 0 51.49 0.00 23.21 3.46 4.33 13.51 4.50 11.58 34.58 15.15 39.69 18.91 53.24 44.32 15.08 8.54 8.42 14.84 30.21 0.00 142.83 16.72 39.01 38 E8a_E9a KnownJunction 0 0.00 0.00 9.88 1.53 0.00 2.56 10.51 2.55 1.79 0.00 38.96 6.30 0.00 11.71 21.51 0.00 0.00 0.00 4.80 0.00 42.01 3.12 19.46 39 I8 Intron 0 80.01 0.69 19.75 6.92 19.36 14.36 10.60 13.82 28.06 11.50 52.50 27.52 28.48 39.96 21.61 4.05 12.08 10.79 20.88 0.00 100.55 31.58 40.01 40 I8_AR1 ActiveIntronRegion 0 80.28 0.69 19.81 6.94 19.43 14.41 10.63 13.86 28.15 11.53 52.67 27.61 28.57 40.09 21.67 4.06 12.13 10.82 20.95 0.00 100.89 31.68 40.14 41 E9_Aa NovelBoundary 0 143.73 0.00 29.01 4.99 46.52 18.63 5.83 15.16 48.12 28.12 49.22 62.27 44.64 53.62 29.92 7.95 13.28 19.48 41.13 0.00 134.06 50.70 23.22 42 ER9a ExonRegion 0 77.18 2.05 24.17 5.07 16.93 21.35 15.59 9.31 19.60 5.22 82.22 33.69 26.56 36.49 39.73 6.00 11.63 6.02 16.08 0.00 139.68 19.33 38.38 43 E9_Da NovelBoundary 1 13.11 0.00 31.64 3.86 7.89 14.20 14.31 16.02 35.10 8.65 45.85 6.00 69.15 24.25 27.69 0.00 4.77 12.89 25.13 0.00 82.97 46.60 18.61 44 E9a_E10a KnownJunction 1 78.38 0.00 18.30 9.12 25.38 5.79 4.11 7.68 17.22 0.00 59.44 12.30 13.64 9.54 42.90 8.72 0.00 1.58 4.80 0.00 65.79 19.17 29.71 45 I9 Intron 0 64.26 0.00 38.49 7.76 15.78 11.62 12.15 12.10 32.16 9.89 49.39 35.40 35.76 33.12 25.33 3.57 15.49 15.95 28.18 0.23 110.63 25.71 33.03 46 I9_AR1 ActiveIntronRegion 0 64.53 0.00 38.65 7.80 15.85 11.66 12.20 12.15 32.30 9.93 49.60 35.55 35.92 33.26 25.43 3.59 15.56 16.01 28.30 0.23 111.10 25.82 33.17 47 E10_Aa NovelBoundary 0 124.24 0.00 34.59 12.99 11.71 28.22 2.21 11.54 38.28 12.06 46.49 23.41 27.11 17.07 28.56 0.00 8.32 17.16 4.80 0.00 132.39 12.98 27.32 48 ER10a ExonRegion 0 126.59 0.00 26.18 17.01 26.46 12.94 8.12 20.41 31.51 9.56 82.51 32.66 54.04 44.75 46.03 4.69 12.47 7.49 16.14 0.00 154.41 28.24 37.59 49 E10_Da NovelBoundary 0 30.38 0.00 25.19 1.93 0.00 30.89 12.98 6.82 17.71 4.22 19.95 32.11 6.82 22.66 6.30 7.78 4.77 18.12 36.42 0.00 73.14 20.94 37.39 50 E10a_E11a KnownJunction 0 137.95 0.00 37.43 10.06 34.55 20.67 5.56 26.82 51.85 8.78 86.18 57.32 45.61 36.85 22.99 8.72 13.28 6.43 30.87 0.00 155.74 22.17 53.44 51 I10 Intron 0 10.92 0.00 13.72 2.77 5.89 7.24 7.03 5.47 9.08 3.11 15.40 9.92 7.39 13.49 7.05 1.80 1.75 3.98 8.70 0.00 26.07 6.64 10.70 52 I10_AR1 ActiveIntronRegion 0 11.50 0.00 14.78 2.11 8.05 7.00 7.81 7.74 10.43 3.95 18.33 11.72 8.58 16.58 6.93 2.41 1.53 4.68 9.94 0.00 31.06 7.23 13.24 53 I10_AR3 ActiveIntronRegion 0 11.85 0.00 16.47 5.68 1.66 10.84 7.82 1.60 9.16 2.13 12.01 4.44 3.60 8.59 8.97 0.92 3.08 3.72 6.93 0.00 19.19 5.18 7.31 54 E11_Aa NovelBoundary 0 30.97 2.89 18.18 4.79 18.85 4.77 2.25 2.05 13.66 1.67 7.84 24.31 6.82 9.71 4.82 3.85 0.00 10.57 12.61 0.00 25.45 13.96 7.17 55 ER11a ExonRegion 0 99.29 0.13 33.99 10.99 25.36 10.56 7.17 30.36 44.87 7.06 102.99 34.45 40.07 36.44 43.77 12.47 19.81 13.18 18.84 0.00 157.28 17.39 45.33 56 E11_Da NovelBoundary 0 22.97 0.00 16.23 3.86 0.00 12.44 3.93 0.00 15.45 2.95 9.11 12.60 0.00 11.65 9.77 0.00 4.11 4.39 3.58 0.00 30.15 3.00 14.77 57 E11a_E12a KnownJunction 0 131.88 0.00 45.27 13.45 10.27 4.43 5.61 29.49 34.66 8.76 116.82 42.61 13.96 31.73 46.36 7.95 20.85 16.62 13.65 0.00 159.08 25.11 28.08 58 E12_Aa NovelBoundary 0 33.41 0.00 10.53 1.93 3.99 2.44 2.25 6.49 14.90 6.10 14.69 0.00 0.00 17.60 14.34 8.37 4.02 0.00 22.31 0.00 27.00 11.82 3.50 59 ER12a ExonRegion 0 128.20 1.42 48.70 14.72 13.10 14.59 13.08 19.15 44.53 9.75 75.06 33.39 18.66 35.18 68.10 5.30 13.62 9.63 12.23 0.00 145.18 26.90 34.25 60 E12a_E13a KnownJunction 0 169.36 0.00 39.12 8.39 20.88 31.52 4.24 17.66 37.18 7.17 63.65 12.75 13.80 28.08 70.83 4.36 13.56 4.15 4.71 0.00 105.15 20.33 35.17 61 I12_SR2 SilentIntronRegion 0 13.09 0.31 15.47 1.84 3.64 12.49 5.21 3.51 8.90 3.88 6.73 11.79 4.11 5.12 7.52 2.70 4.50 4.86 3.86 0.00 9.00 2.21 7.56 62 E13_Aa NovelBoundary 0 16.23 0.00 31.81 5.73 0.00 7.55 10.55 4.48 7.35 1.67 4.79 0.00 0.00 2.24 0.00 3.67 8.42 3.90 8.56 0.00 5.44 0.00 0.00 63 ER13a ExonRegion 0 158.99 0.73 60.18 10.66 13.75 27.10 15.42 17.80 44.08 11.67 78.14 37.97 39.91 43.26 45.34 5.20 8.43 13.57 25.57 0.00 156.28 30.66 42.78 64 E13_Da NovelBoundary 0 0.00 0.00 27.47 1.40 3.99 10.62 6.27 2.55 7.52 3.33 14.69 6.00 0.00 17.66 15.20 4.02 4.39 4.19 12.71 0.00 20.88 2.57 12.89 65 E13a_E14a KnownJunction 1 196.55 3.09 68.45 17.61 15.70 16.58 11.84 23.04 35.88 7.60 59.28 18.31 46.26 33.32 84.55 8.20 9.44 19.73 30.49 0.00 139.80 50.09 74.69 66 E14_Aa NovelBoundary 0 10.59 0.00 38.97 6.76 3.48 7.67 12.50 5.87 13.74 8.03 5.05 6.30 6.82 7.83 8.90 0.00 0.00 12.81 0.00 0.00 22.05 5.69 17.41 67 ER14a ExonRegion 0 113.91 2.02 64.60 16.60 9.70 18.04 12.72 27.23 43.66 12.09 96.26 35.42 15.78 52.28 76.68 4.52 15.00 17.66 15.91 0.00 130.81 31.58 48.13 68 E14_Da NovelBoundary 0 23.63 0.00 41.93 3.46 3.65 2.33 6.49 6.12 18.81 2.10 15.48 0.00 0.00 5.42 10.14 3.50 4.77 3.73 17.41 0.00 8.03 2.88 4.27 69 E14a_E15a KnownJunction 0 97.72 0.00 44.53 21.71 12.14 23.11 13.51 20.00 28.41 4.00 77.76 31.66 20.45 34.55 47.84 0.00 13.00 11.73 0.00 0.00 88.09 15.86 40.12 70 I14_SR1 SilentIntronRegion 1 5.63 0.00 5.67 0.00 0.00 4.88 0.00 2.28 3.27 0.76 12.00 7.91 1.71 5.93 3.63 0.00 2.93 0.80 1.41 0.00 12.70 4.62 9.12 71 E15_Aa NovelBoundary 1 9.56 0.00 27.23 3.63 14.18 8.35 0.00 8.54 24.10 6.42 4.32 24.01 6.82 9.89 8.78 0.00 4.21 5.89 0.00 0.00 4.94 0.00 3.33 72 ER15a ExonRegion 0 80.27 1.28 40.75 12.75 6.48 17.47 7.92 22.49 34.15 9.88 62.74 15.39 23.44 27.21 49.46 5.13 9.05 11.56 18.99 0.67 88.42 20.48 20.34 73 IG44 Intergenic 0 3.05 0.28 4.40 1.41 2.41 4.87 3.31 2.28 7.12 1.75 1.71 2.02 4.39 1.03 0.89 0.05 0.69 0.83 2.65 0.22 7.91 1.52 5.09 74 IG44_AR1 ActiveIntergenicRegion 0 8.91 0.50 15.62 3.02 5.30 10.74 4.39 5.74 17.75 3.39 7.84 10.97 12.39 5.59 6.00 0.74 2.45 2.05 7.24 0.53 18.89 6.86 9.61