Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C11orf41 Gene 0 10.28 61.54 37.08 64.13 52.22 102.20 36.51 126.81 96.40 139.71 2.43 1.10 3.29 1.58 2.86 0.44 1.55 98.42 53.84 60.02 13.80 32.63 13.54 2 321505 Transcript 0 1.52 4.15 1.42 3.27 4.70 11.14 4.73 9.17 7.76 24.83 0.00 0.00 0.86 0.00 0.00 0.00 0.00 33.84 15.78 14.48 6.75 9.68 4.17 3 265654 Transcript 0 0.00 0.17 0.00 0.00 0.00 0.31 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.00 0.00 0.00 0.00 4 389726 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 IG43_SR3 SilentIntergenicRegion 0 0.68 6.29 3.52 13.52 5.12 2.82 7.16 16.62 8.85 11.06 0.07 0.08 0.35 0.00 0.24 0.00 0.02 5.39 4.32 7.49 0.23 0.38 1.46 6 IG43_SR5 SilentIntergenicRegion 0 0.28 5.15 1.87 8.62 3.89 1.53 7.21 16.14 9.36 9.21 0.00 0.00 0.29 0.00 0.16 0.00 0.00 4.17 3.09 5.89 0.06 0.09 0.88 7 IG43_AR10 ActiveIntergenicRegion 0 0.47 11.75 6.75 8.40 7.98 34.50 10.20 52.19 56.11 101.13 3.94 0.78 2.55 1.55 4.35 0.00 0.00 119.33 44.00 61.55 20.12 21.03 10.19 8 IG43_SR8 SilentIntergenicRegion 0 0.00 20.34 8.17 18.85 12.04 37.90 13.24 87.00 79.05 134.57 4.83 0.00 0.00 1.08 9.67 0.00 0.00 140.43 61.05 75.89 22.77 26.39 22.51 9 IG43_AR11 ActiveIntergenicRegion 0 0.92 8.19 5.41 7.53 6.87 19.89 9.41 41.79 39.40 90.53 2.69 0.77 6.23 1.05 1.35 0.00 0.00 91.93 49.84 48.42 19.63 31.47 21.22 10 ER1a ExonRegion 0 0.00 2.25 2.84 2.41 5.07 14.83 7.69 6.34 9.38 29.86 0.00 0.00 1.73 0.00 0.00 0.00 0.00 49.14 23.47 17.58 10.59 17.03 8.35 11 E1_Ab KnownBoundary 0 0.00 9.41 8.96 5.89 19.52 56.05 18.20 19.55 24.68 69.89 0.00 0.00 6.82 0.00 0.00 0.00 0.00 105.46 59.01 37.84 3.15 40.05 7.17 12 ER1b ExonRegion 0 1.43 19.13 14.69 15.75 14.14 49.21 24.48 52.91 41.35 101.25 3.36 0.91 6.01 1.11 1.98 0.00 0.17 88.31 68.92 46.39 21.27 41.63 17.77 13 E1_Da NovelBoundary 0 0.00 9.87 11.65 12.49 4.16 21.98 25.57 22.76 16.12 56.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.61 41.41 7.86 5.44 14.70 3.84 14 E1a_E2a KnownJunction 0 3.04 6.05 0.00 4.13 4.33 7.44 1.77 11.99 6.13 19.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.53 8.09 11.38 2.90 2.33 0.00 15 E1b_E2a KnownJunction 0 10.52 38.15 16.71 26.27 8.49 42.53 23.72 39.92 28.15 84.19 4.42 0.00 0.00 0.00 0.00 0.00 0.00 53.60 21.65 51.26 20.08 23.27 15.45 16 ER1c ExonRegion 0 5.29 20.67 14.57 17.94 8.03 33.82 22.65 25.73 18.80 72.76 1.93 0.00 0.00 0.00 0.00 0.00 0.00 48.55 32.03 28.01 19.22 22.11 10.77 17 ER2a ExonRegion 0 2.96 35.16 21.68 32.25 17.85 69.16 24.84 99.04 98.16 130.62 2.70 0.00 2.97 1.71 1.48 0.00 0.00 189.50 68.55 101.35 27.87 47.61 19.88 18 E2a_E3a KnownJunction 0 3.04 13.16 19.96 40.39 21.14 126.97 33.56 64.16 105.09 122.41 2.68 0.00 0.00 3.00 0.00 0.00 0.00 173.65 50.17 86.10 32.06 36.01 15.71 19 ER3a ExonRegion 0 1.68 33.94 21.44 60.06 16.72 80.77 36.50 99.68 138.01 174.77 3.55 0.00 6.31 2.09 0.00 0.00 0.00 220.47 74.00 100.79 32.16 45.44 31.21 20 E3a_E4a KnownJunction 0 0.00 29.34 31.70 83.84 31.41 93.92 44.83 149.43 157.78 231.68 2.68 0.00 12.99 0.00 0.00 0.00 0.00 238.07 82.26 88.65 34.60 67.17 28.51 21 ER4a ExonRegion 0 3.43 46.94 28.45 57.75 26.75 83.85 31.91 108.11 139.03 178.53 2.19 0.00 2.24 1.19 3.17 0.00 0.00 178.77 55.58 101.56 22.70 49.86 19.41 22 E4a_E5a KnownJunction 0 0.00 33.15 18.89 40.29 31.24 55.71 22.66 84.78 100.26 142.53 2.68 0.00 0.00 0.00 10.75 0.00 0.00 199.47 33.32 115.50 27.37 48.01 22.71 23 ER5a ExonRegion 0 2.42 36.39 28.87 44.47 32.91 74.35 35.37 106.76 101.15 141.86 0.98 0.00 1.16 0.52 6.24 0.00 0.00 177.63 61.69 95.46 21.21 53.27 21.17 24 E5a_E6a KnownJunction 0 0.00 45.91 25.16 48.15 10.36 52.36 34.71 128.89 127.60 161.82 2.21 0.00 6.49 0.00 0.00 0.00 0.00 181.36 66.26 85.65 29.53 33.25 11.61 25 ER6a ExonRegion 0 2.65 36.52 32.09 38.55 10.70 49.46 28.65 101.19 95.10 137.54 1.14 0.00 3.97 0.51 3.95 0.00 0.00 183.03 46.98 70.36 19.86 34.84 15.42 26 E6a_E7a KnownJunction 0 0.00 47.69 33.29 52.41 41.34 87.22 56.17 115.29 87.41 143.39 5.16 0.00 0.00 2.12 4.45 0.00 0.00 153.50 76.90 90.89 34.22 42.92 11.61 27 ER7a ExonRegion 0 3.60 33.79 22.16 28.80 29.66 86.43 39.70 84.41 74.48 128.19 0.84 0.00 5.78 2.38 2.71 0.00 0.00 148.22 44.17 82.30 26.33 30.35 13.66 28 E7a_E8a KnownJunction 0 0.00 37.69 15.40 17.01 25.55 94.77 26.32 57.42 66.72 130.87 2.11 0.00 6.17 2.41 0.00 0.00 0.00 145.92 40.38 71.27 11.43 32.45 20.32 29 ER8a ExonRegion 0 2.31 21.81 21.14 19.73 9.40 61.72 20.64 62.11 69.05 115.72 2.43 3.30 3.30 1.50 1.66 0.00 0.00 119.70 32.82 56.73 15.60 21.36 15.40 30 E8a_E9a KnownJunction 0 10.08 15.79 28.38 32.76 15.79 77.97 36.48 64.65 85.99 192.87 6.69 5.85 14.61 2.12 6.18 0.00 0.00 116.15 58.73 92.55 11.55 31.05 14.43 31 ER9a ExonRegion 0 3.59 16.77 24.36 24.52 24.75 77.50 23.18 80.14 102.97 150.43 4.75 0.25 2.10 1.41 0.59 0.00 0.00 147.92 63.04 70.55 21.78 27.76 18.35 32 E9a_E10a KnownJunction 0 0.00 27.89 22.89 29.87 24.28 158.72 16.96 96.48 126.01 163.86 7.00 0.00 0.00 0.00 4.45 0.00 0.00 160.88 85.93 79.32 25.14 29.09 29.28 33 ER10a ExonRegion 0 4.84 16.16 19.95 24.53 23.98 84.33 17.70 85.92 95.70 129.03 2.88 0.00 2.40 0.50 2.26 0.00 0.00 140.52 57.14 65.17 25.76 30.01 17.10 34 E10a_E12a KnownJunction 0 3.48 13.94 19.10 26.50 47.71 78.88 16.69 95.17 117.27 148.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 167.64 51.67 59.19 24.90 30.86 18.18 35 ER11a ExonRegion 0 0.00 0.17 0.00 0.00 0.00 0.31 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.00 0.00 0.00 0.00 36 ER12a ExonRegion 0 1.56 19.41 18.21 29.03 24.96 81.14 22.19 93.54 89.59 128.03 3.21 0.00 1.06 0.51 3.34 0.00 0.00 146.22 46.54 76.54 26.12 24.93 17.70 37 E12a_E13a KnownJunction 0 0.00 27.30 28.62 52.84 3.65 62.18 19.25 108.85 92.77 147.07 0.00 0.00 0.00 0.00 5.19 0.00 0.00 193.84 56.00 62.32 15.88 23.88 31.93 38 ER13a ExonRegion 0 2.53 17.73 30.13 41.82 17.52 97.78 22.47 101.16 83.92 135.16 3.16 0.00 3.44 0.51 2.52 0.00 0.00 181.31 60.70 82.90 21.06 31.17 23.95 39 E13a_E14a KnownJunction 0 0.00 11.71 30.45 25.70 42.53 128.22 54.19 68.31 76.85 140.60 4.47 0.00 6.66 0.00 0.00 0.00 0.00 107.49 22.12 59.70 19.46 37.84 15.88 40 ER14a ExonRegion 0 4.15 23.15 32.48 30.71 16.98 89.86 22.41 88.08 68.39 126.10 2.25 0.00 3.74 1.02 0.67 0.00 0.00 131.18 63.93 69.08 18.57 28.35 23.07 41 E14a_E15a KnownJunction 0 0.00 29.21 20.84 28.23 23.09 83.70 22.79 80.14 63.54 122.20 5.00 0.00 0.00 0.00 0.00 0.00 0.00 75.49 46.78 67.11 20.51 31.41 11.78 42 ER15a ExonRegion 0 3.47 31.55 23.44 31.85 30.28 102.35 23.53 101.34 88.98 136.33 1.24 0.00 2.99 0.64 1.93 0.00 0.00 127.77 62.93 65.71 20.87 37.85 18.47 43 E15a_E16a KnownJunction 0 0.00 22.50 21.82 28.93 20.12 80.01 20.23 81.29 100.09 133.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 109.35 25.51 64.49 19.83 32.76 11.87 44 ER16a ExonRegion 0 1.95 24.84 23.91 36.36 12.64 70.98 18.86 79.02 77.55 140.80 0.76 3.40 1.52 0.50 1.03 0.00 0.00 92.00 31.00 60.39 18.38 32.25 13.37 45 E16a_E17a KnownJunction 0 10.15 39.73 31.64 48.11 41.17 146.56 26.94 85.27 87.59 165.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 138.00 64.47 56.69 21.93 31.60 14.26 46 ER17a ExonRegion 0 4.81 28.23 20.37 32.59 11.86 60.30 18.64 63.68 79.17 110.60 2.81 0.16 0.00 0.19 1.19 0.03 0.00 141.41 40.10 44.28 13.93 19.41 8.63 47 E17a_E18a KnownJunction 0 0.00 26.25 23.86 27.77 19.86 70.13 26.50 74.59 66.06 128.27 0.00 6.30 0.00 0.00 0.00 0.00 0.00 97.21 47.53 47.75 12.17 25.47 8.45 48 ER18a ExonRegion 0 0.00 20.75 25.67 27.24 8.41 43.97 12.83 67.89 65.83 111.21 1.03 4.99 4.02 1.54 5.42 1.49 1.72 39.22 26.91 46.40 9.89 19.94 6.68 49 E18a_E19a KnownJunction 0 0.00 18.22 15.17 31.56 14.09 22.94 13.34 60.71 83.71 111.02 0.00 0.00 0.00 0.00 4.45 0.00 0.00 33.66 32.47 33.49 5.25 0.00 10.93 50 E19_Aa NovelBoundary 0 0.00 2.43 15.14 14.08 4.33 5.05 4.11 20.41 9.69 8.33 0.00 0.00 0.00 0.00 0.00 0.00 4.21 24.95 0.00 3.26 2.59 2.39 0.00 51 ER19a ExonRegion 0 2.94 22.53 26.90 32.85 9.46 48.93 12.27 84.75 84.43 130.28 9.59 1.22 2.55 3.42 2.12 2.19 4.52 128.91 48.87 53.15 17.76 22.12 11.88 52 E19a_E20a KnownJunction 0 5.78 13.94 40.65 61.16 24.70 92.67 24.02 119.36 144.85 202.57 14.32 0.00 0.00 2.35 0.00 13.07 0.00 206.40 92.71 78.11 23.97 56.70 44.73 53 E20_Aa NovelBoundary 0 2.82 8.49 13.13 11.12 4.33 4.54 1.85 22.34 26.74 14.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.69 27.11 6.39 3.15 5.57 0.00 54 ER20a ExonRegion 0 1.42 29.47 29.05 50.07 19.91 76.72 19.10 110.95 107.98 164.21 5.84 1.20 2.68 5.05 3.89 4.73 12.33 144.05 76.09 51.83 19.11 23.56 18.12 55 E20_Da NovelBoundary 0 0.00 6.58 11.47 10.12 0.00 0.00 0.00 14.79 1.68 4.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.11 21.84 6.39 0.00 0.00 0.00 56 E20a_E21a KnownJunction 0 0.00 44.27 54.91 68.16 12.56 66.10 16.43 191.98 177.34 262.66 7.11 0.00 0.00 3.00 4.45 7.18 13.28 295.52 78.50 62.51 11.18 22.23 17.93 57 ER21a ExonRegion 0 17.20 93.77 51.64 96.24 83.25 135.90 47.84 172.00 116.90 155.77 1.91 1.47 2.83 1.90 3.55 0.63 2.43 72.71 48.53 57.16 7.21 29.27 10.13