Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC34 Gene 0 53.36 58.50 46.81 26.35 80.24 62.29 63.90 45.98 24.16 56.71 62.89 60.78 35.17 49.76 37.85 34.71 40.63 28.17 42.51 36.46 5.88 14.17 10.03 2 343895 Transcript 0 0.00 0.00 11.48 7.66 0.00 0.00 0.00 12.51 6.67 16.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.40 0.00 0.00 0.00 0.00 0.00 3 317945 Transcript 0 2.18 10.98 4.54 5.76 21.20 13.66 20.69 21.32 9.50 16.14 5.04 15.03 7.18 4.89 2.25 4.15 8.66 3.63 9.84 9.07 1.85 2.89 2.23 4 328697 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1b ExonRegion 0 5.32 11.85 2.18 0.53 14.75 35.56 8.53 0.55 0.33 5.54 6.41 0.00 0.00 7.61 14.08 2.83 8.61 6.81 7.46 3.63 0.00 0.97 6.02 8 E1_Da KnownBoundary 0 26.75 41.64 6.62 1.43 47.88 108.57 26.32 1.81 1.22 11.36 18.90 0.00 0.00 19.37 23.73 12.22 26.37 29.02 26.54 11.70 0.00 3.06 12.63 9 ER1c ExonRegion 0 19.05 33.55 11.85 3.63 31.66 96.27 21.85 1.73 1.24 14.53 18.68 0.00 0.00 25.99 22.24 11.39 23.11 22.17 19.11 12.77 0.00 2.08 8.81 10 E1b_E1d KnownJunction 0 0.00 0.00 25.58 13.42 0.00 0.00 0.00 4.81 8.28 27.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.10 0.00 0.00 0.00 0.00 0.00 11 ER1d ExonRegion 1 92.83 51.75 25.69 11.94 48.99 161.75 47.07 12.04 10.31 37.06 49.19 0.00 0.00 50.68 46.62 38.64 69.09 66.33 49.21 34.19 1.60 6.54 20.96 12 ER1e ExonRegion 1 140.04 55.58 34.51 16.58 58.42 171.15 58.92 27.94 18.32 49.70 64.43 0.00 0.00 76.06 66.73 68.36 91.32 100.70 67.42 47.87 8.45 6.25 26.43 13 E1c_E1e KnownJunction 0 0.00 0.00 8.87 9.56 0.00 0.00 0.00 32.74 11.75 20.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.09 0.00 0.00 0.00 0.00 0.00 14 ER1f ExonRegion 1 141.15 44.88 36.34 19.55 56.84 142.28 48.85 29.44 18.87 49.51 60.05 0.00 0.00 55.44 50.92 73.38 82.29 109.46 65.68 37.86 14.97 6.68 24.71 15 E1_Ae KnownBoundary 0 112.91 27.63 34.53 22.61 55.09 91.54 27.82 40.05 23.64 47.65 41.69 0.00 0.00 20.37 29.67 49.22 28.14 104.30 52.90 13.49 21.87 5.69 13.66 16 ER1g ExonRegion 1 103.71 31.86 37.17 19.53 47.72 76.10 34.20 31.40 20.17 46.45 45.75 0.00 0.00 31.67 38.20 58.45 49.51 109.94 63.71 17.38 17.63 8.33 25.45 17 ER1h ExonRegion 1 46.50 35.50 55.47 27.85 42.78 87.43 43.09 34.74 21.14 70.11 90.32 9.60 17.23 78.48 59.11 62.47 70.80 89.11 66.36 60.43 16.38 8.88 19.13 18 E1d_E2a KnownJunction 1 25.49 108.07 101.62 68.76 107.56 236.17 137.26 49.86 43.84 118.94 161.04 41.86 40.74 124.61 59.95 79.81 84.62 63.05 53.84 84.12 20.82 23.15 27.83 19 ER2a ExonRegion 0 206.99 153.38 128.11 74.42 136.46 117.18 118.06 86.14 49.41 136.16 159.97 64.32 64.82 194.04 110.33 115.31 118.05 73.88 110.34 104.62 19.82 24.97 32.07 20 E2a_E3a KnownJunction 0 120.76 134.52 129.06 71.19 270.71 161.04 191.18 78.94 48.47 139.17 116.61 70.82 90.09 173.05 93.58 71.95 105.84 53.52 86.12 87.89 19.89 40.90 16.30 21 E2a_E4a NovelJunction 0 7.04 30.52 15.40 13.58 27.59 5.79 3.80 5.59 6.92 7.01 0.00 12.60 6.82 7.06 0.00 0.00 0.00 11.77 9.51 20.07 3.03 3.12 0.00 22 ER3a ExonRegion 0 158.72 139.79 111.71 62.54 250.63 149.68 158.30 67.91 31.55 106.19 123.01 114.37 130.97 142.77 87.20 92.00 74.94 37.43 74.71 64.20 6.06 23.83 21.83 23 E3_Da KnownBoundary 0 6.30 17.83 1.45 8.56 17.32 20.61 30.69 46.82 9.00 22.51 4.79 12.00 6.66 14.66 0.00 0.00 18.05 2.45 4.80 0.00 0.00 2.63 4.01 24 E3a_E4a KnownJunction 1 268.05 143.79 103.84 44.68 138.46 151.22 121.54 40.50 14.76 40.64 69.97 105.33 133.76 131.44 115.83 67.76 34.32 29.43 87.53 52.41 0.00 22.17 19.89 25 ER3b ExonRegion 0 2.18 10.98 4.54 5.76 21.20 13.66 20.69 21.32 9.50 16.14 5.04 15.03 7.18 4.89 2.25 4.15 8.66 3.63 9.84 9.07 1.85 2.89 2.23 26 E3_Db NovelBoundary 0 0.00 11.25 4.73 6.79 15.70 14.71 25.48 20.58 11.43 11.74 2.68 6.30 6.82 2.94 0.00 4.02 0.00 1.87 8.56 12.21 0.00 2.51 0.00 27 I3_AR1 ActiveIntronRegion 0 1.81 7.23 4.71 5.26 17.76 16.28 10.70 19.21 7.37 15.13 2.61 14.59 3.55 4.23 1.57 1.41 1.00 1.27 5.97 2.75 0.68 1.54 0.45 28 ER4a ExonRegion 1 192.67 211.36 111.67 44.72 329.10 195.44 213.47 70.48 33.15 90.81 94.51 191.40 166.30 106.96 86.69 55.42 57.63 17.48 63.23 66.43 2.13 29.84 15.11 29 E4a_E5a KnownJunction 1 404.96 281.99 155.26 58.33 509.25 374.90 351.76 94.26 49.45 140.35 84.97 269.19 128.40 114.13 157.49 94.68 95.37 52.15 85.37 68.77 0.00 42.13 20.91 30 ER5a ExonRegion 0 133.77 192.76 165.68 96.28 245.58 164.18 213.77 147.47 68.60 192.87 207.87 280.07 154.21 136.14 105.02 107.65 124.88 69.85 157.07 103.85 11.92 48.07 25.77 31 E5a_E6a KnownJunction 0 99.13 196.54 165.58 120.33 279.20 160.14 208.18 180.27 67.85 207.83 256.85 342.71 168.98 125.61 105.82 111.94 182.14 73.70 129.51 120.74 17.54 34.41 18.95 32 ER6a ExonRegion 0 74.83 91.14 84.09 44.76 113.81 80.36 90.33 83.37 49.76 96.31 134.87 126.56 35.36 69.09 67.46 48.62 59.82 36.69 63.76 55.22 7.73 33.56 12.25 33 IG7_AR12 ActiveIntergenicRegion 0 9.53 24.96 15.72 6.21 41.94 16.34 36.27 13.87 5.59 38.16 11.18 16.32 7.34 6.04 6.82 4.32 0.00 2.01 3.18 7.94 0.64 1.21 0.00