Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 QSER1 Gene 0 37.47 130.05 55.26 101.81 96.23 145.26 121.70 105.15 128.35 172.44 103.00 183.22 158.64 99.58 45.50 69.60 90.65 117.23 53.80 138.28 72.41 177.47 94.36 2 428421 Transcript 0 8.83 13.29 13.38 20.20 19.43 20.70 24.25 17.89 26.29 14.06 7.02 21.40 14.60 8.91 5.65 11.53 14.94 13.45 6.46 18.59 3.17 27.65 5.71 3 78652 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 399302 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 IG35_SR1 SilentIntergenicRegion 0 9.39 0.00 0.07 0.49 6.98 6.28 1.85 2.47 2.87 0.41 4.33 23.19 33.53 55.72 41.71 16.37 17.85 0.00 0.00 0.00 0.00 4.39 3.87 6 IG35_AR1 ActiveIntergenicRegion 0 2.60 0.00 0.29 0.15 1.84 5.76 1.50 0.87 4.57 0.40 6.42 37.49 35.58 40.78 29.56 10.55 15.57 0.00 0.00 0.00 0.00 3.23 1.37 7 IG35_AR2 ActiveIntergenicRegion 0 5.86 0.24 0.15 0.58 3.22 3.28 0.84 0.83 3.86 0.29 8.50 33.92 35.06 39.87 26.58 16.37 20.26 0.07 0.00 0.00 0.00 1.58 2.36 8 IG35_AR3 ActiveIntergenicRegion 0 8.01 0.00 0.28 0.78 2.89 1.42 1.33 1.99 3.70 1.58 3.88 21.73 14.75 19.33 27.68 6.43 5.10 0.00 0.00 0.00 0.00 2.25 0.91 9 IG35_AR5 ActiveIntergenicRegion 0 1.86 2.84 0.74 3.10 4.06 2.27 2.16 2.17 2.47 1.79 1.52 29.17 0.99 3.88 1.10 2.40 0.48 1.59 1.67 1.40 0.16 0.00 0.43 10 IG35_AR6 ActiveIntergenicRegion 0 14.89 18.23 2.65 6.50 9.81 1.89 2.52 7.55 1.07 2.83 11.60 11.98 1.09 5.52 11.90 0.00 5.28 1.85 3.19 0.00 0.00 0.00 0.00 11 IG35_SR5 SilentIntergenicRegion 0 5.09 3.95 4.66 4.28 1.40 3.63 0.61 5.28 3.22 2.03 4.87 26.15 0.96 6.66 7.63 2.22 3.28 6.81 9.09 1.54 0.37 0.52 0.00 12 ER1a ExonRegion 0 0.00 2.63 0.56 0.12 1.02 3.05 1.07 2.39 1.18 2.56 9.12 9.92 4.22 11.64 2.18 4.14 6.68 3.16 0.89 7.53 13.27 15.24 3.96 13 E1a_E2a KnownJunction 0 0.00 6.51 5.50 0.00 8.15 13.86 1.85 12.16 8.45 13.81 31.43 25.51 6.66 43.26 8.90 20.51 21.97 13.76 4.52 34.71 51.77 48.37 10.76 14 I1_SR2 SilentIntronRegion 0 8.88 19.34 10.50 16.73 9.79 3.38 24.91 16.21 14.84 13.85 1.55 14.74 12.97 1.13 9.59 5.82 9.84 3.08 7.63 18.50 1.58 1.59 3.98 15 I1_AR2 ActiveIntronRegion 0 9.70 20.67 7.05 19.14 6.13 0.00 24.38 23.19 12.09 19.16 11.52 10.82 26.38 0.88 4.47 13.62 13.62 1.92 13.67 19.33 2.20 3.39 4.89 16 I1_AR3 ActiveIntronRegion 1 6.29 16.37 8.51 20.88 8.05 0.92 29.91 20.79 10.29 12.12 1.84 16.85 14.96 1.93 11.98 8.99 9.43 5.20 12.61 15.78 0.77 3.19 4.94 17 I1_AR4 ActiveIntronRegion 1 6.54 19.73 10.48 21.17 10.21 3.47 25.61 27.39 24.61 22.51 1.77 12.18 32.34 1.45 13.14 4.20 5.06 1.47 4.13 18.69 1.79 1.35 2.37 18 E2_Aa NovelBoundary 0 3.26 19.27 8.16 12.09 8.66 0.00 10.33 16.72 17.97 5.64 2.26 12.60 6.17 0.00 0.00 3.50 12.72 7.42 25.41 30.17 6.30 22.04 3.24 19 ER2a ExonRegion 0 3.17 7.70 19.35 12.60 9.71 14.78 30.13 33.10 40.73 50.62 68.37 58.58 49.52 60.18 19.23 29.83 62.31 102.93 26.16 85.80 82.41 74.69 59.07 20 E2a_E3a KnownJunction 1 10.45 12.23 23.42 8.39 7.89 36.06 29.41 41.53 61.43 51.44 74.39 66.62 81.65 78.29 21.88 32.04 126.13 134.64 24.47 128.09 102.06 91.42 88.78 21 ER3a ExonRegion 0 12.83 28.13 27.92 25.37 12.82 28.06 32.70 69.42 83.61 86.37 117.24 102.20 101.47 126.43 39.74 92.45 135.95 229.22 66.03 182.49 164.57 157.45 129.72 22 E3a_E4a KnownJunction 1 6.59 34.73 48.19 25.11 41.34 26.75 64.43 51.30 77.98 63.88 101.29 95.13 124.50 96.36 29.30 29.22 151.94 170.71 17.79 156.92 143.94 83.09 84.85 23 E4_Aa NovelBoundary 0 3.33 5.46 18.30 6.99 3.48 0.00 1.68 0.00 1.45 1.48 0.00 0.00 6.82 2.47 0.00 0.00 0.00 2.24 0.00 6.20 0.00 0.00 0.00 24 ER4a ExonRegion 0 15.38 29.21 33.51 35.50 19.12 54.67 68.00 67.26 111.33 103.42 133.98 145.80 191.38 168.46 38.79 104.38 154.83 263.56 76.15 192.42 156.83 151.67 165.53 25 E4_Da KnownBoundary 1 17.26 20.92 43.91 27.30 22.33 52.92 52.82 65.64 137.73 150.99 159.25 190.11 319.30 140.68 23.61 88.44 176.90 164.94 52.24 137.04 153.58 98.28 114.90 26 E4a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER4b ExonRegion 0 10.62 50.40 25.79 38.28 28.30 65.38 75.77 78.69 131.17 131.13 144.73 259.89 330.73 143.44 31.43 91.72 174.23 129.70 64.19 188.93 98.65 192.43 123.77 28 E4_Ab KnownBoundary 1 13.41 38.55 21.44 28.90 11.63 68.60 57.94 50.52 101.16 90.07 140.88 107.44 168.01 171.58 20.40 94.16 162.79 158.02 47.72 145.80 139.06 99.63 133.76 29 ER4c ExonRegion 0 14.56 61.78 26.31 45.34 38.24 94.85 97.89 63.02 114.05 118.76 135.89 245.04 208.20 124.59 28.66 94.29 124.49 157.60 53.33 163.47 102.18 174.07 121.63 30 E4b_E5a KnownJunction 0 18.37 69.86 16.94 32.83 47.79 141.00 114.65 69.37 120.43 129.23 120.93 286.74 127.75 85.29 36.84 74.68 107.15 97.79 21.46 112.11 82.23 135.39 154.93 31 ER5a ExonRegion 0 17.38 76.81 23.81 45.28 46.48 98.88 87.33 66.96 111.20 130.48 120.29 158.61 133.70 113.65 35.35 87.57 103.22 101.51 44.83 139.33 101.43 143.14 92.63 32 E5a_E6a KnownJunction 0 20.15 111.43 22.06 46.58 56.28 90.06 136.29 73.28 105.96 162.60 98.02 105.33 104.86 120.61 28.43 68.70 98.55 39.05 39.81 133.46 51.83 198.03 85.79 33 ER6a ExonRegion 0 33.36 127.87 33.61 72.26 86.04 160.97 147.96 85.99 134.17 158.79 112.80 199.71 173.25 108.77 26.14 85.28 88.39 80.76 52.65 136.46 47.11 212.71 94.65 34 E6a_E7a KnownJunction 0 16.45 88.08 31.19 105.38 134.13 192.56 146.53 118.79 150.75 210.30 112.77 306.25 290.40 80.11 38.07 116.21 69.85 120.05 36.05 167.34 18.78 252.28 112.08 35 ER7a ExonRegion 0 22.29 101.07 28.38 94.79 77.88 169.43 142.93 116.10 175.87 213.84 154.11 243.23 246.33 121.05 45.84 103.25 99.17 141.30 63.75 188.55 61.52 311.63 126.30 36 E7a_E8a KnownJunction 0 28.52 109.06 32.20 90.90 101.44 130.72 121.58 124.62 169.93 197.52 172.89 261.84 173.85 121.61 46.11 96.21 102.85 112.75 74.36 181.72 111.45 203.91 72.56 37 ER8a ExonRegion 0 28.16 112.77 38.86 93.21 73.75 153.41 146.43 117.69 171.10 210.59 145.32 269.98 190.12 135.29 48.47 115.72 132.05 153.46 93.34 177.88 116.79 243.66 143.36 38 E8a_E9a KnownJunction 0 43.49 141.75 30.31 69.22 77.16 168.26 131.60 98.04 143.84 176.89 154.20 198.96 133.92 126.97 39.19 118.69 101.92 153.34 120.66 116.52 139.12 227.36 174.65 39 ER9a ExonRegion 0 22.53 87.53 41.23 80.92 80.31 174.85 132.19 92.23 133.18 182.94 132.98 231.22 153.00 126.81 41.94 98.88 109.74 181.78 80.86 159.13 111.19 159.49 144.43 40 E9a_E10a KnownJunction 0 17.48 55.12 24.87 85.44 81.32 127.03 105.68 78.82 86.11 120.56 69.44 169.86 171.90 104.48 43.76 77.84 34.69 133.31 56.94 114.22 61.04 136.61 130.43 41 ER10a ExonRegion 0 14.88 81.68 33.76 71.97 71.81 144.78 118.67 81.47 109.94 141.29 92.15 189.88 117.54 94.65 46.72 68.45 78.35 96.59 49.99 122.19 53.88 179.71 115.25 42 E10a_E11a KnownJunction 0 35.56 107.74 41.36 63.03 85.74 162.92 161.19 103.26 103.12 192.22 81.92 179.46 123.04 85.17 15.82 37.77 105.94 85.35 57.98 109.23 40.71 179.11 102.86 43 ER11a ExonRegion 0 43.67 116.22 39.66 73.41 94.07 149.99 140.65 97.62 116.75 162.88 79.86 224.45 148.61 82.62 46.08 52.43 78.70 57.45 32.67 106.84 22.09 198.45 70.48 44 E11a_E12a KnownJunction 0 42.16 135.83 38.17 58.87 93.21 163.09 169.05 85.02 124.28 161.41 71.07 233.18 136.68 76.76 58.22 31.87 87.14 43.69 16.28 115.63 25.70 178.31 69.23 45 ER12a ExonRegion 0 41.10 115.26 39.58 64.10 74.03 126.65 115.16 87.23 113.08 183.89 80.68 183.73 135.18 76.64 40.68 45.23 51.13 47.96 20.24 100.33 12.76 166.49 44.20 46 E12_Da KnownBoundary 0 3.78 9.08 13.31 21.84 19.44 32.65 37.32 23.54 37.21 12.41 6.74 48.17 13.15 11.77 6.30 17.09 0.00 2.57 4.80 17.96 0.00 32.27 7.34 47 E12a_E13a KnownJunction 0 48.90 128.99 41.39 44.72 59.51 117.83 129.88 77.96 101.27 160.96 65.38 152.00 124.67 71.34 27.69 58.19 54.23 26.32 25.69 92.49 5.31 114.87 34.15 48 ER12b ExonRegion 0 8.83 13.29 13.38 20.20 19.43 20.70 24.25 17.89 26.29 14.06 7.02 21.40 14.60 8.91 5.65 11.53 14.94 13.45 6.46 18.59 3.17 27.65 5.71 49 I12 Intron 0 10.00 13.88 10.79 17.60 15.98 20.82 25.98 14.37 27.55 12.34 12.69 17.50 20.81 6.90 6.16 9.36 7.37 11.25 4.60 11.87 2.03 19.69 5.98 50 I12_AR1 ActiveIntronRegion 0 10.03 13.92 10.81 17.64 16.02 20.88 26.05 14.41 27.62 12.37 12.72 17.54 20.86 6.92 6.18 9.39 7.39 11.28 4.61 11.90 2.03 19.74 5.99 51 E13_Aa NovelBoundary 0 20.60 18.22 9.22 19.48 28.27 76.26 16.78 22.06 30.47 18.96 11.48 12.60 12.99 2.35 16.32 7.35 0.00 7.67 0.00 15.15 2.66 9.00 11.35 52 ER13a ExonRegion 0 67.50 228.27 94.08 179.79 175.78 224.21 166.24 156.13 150.20 243.26 73.42 149.25 108.34 68.82 64.72 44.74 47.43 73.25 51.68 112.36 36.15 190.03 63.94