Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PSMD13 Gene 0 337.13 319.41 388.64 344.31 199.06 269.14 230.79 358.51 121.54 601.50 572.90 339.41 168.16 591.66 596.06 433.10 397.56 222.59 167.83 230.45 267.90 270.09 173.59 2 431206 Transcript 0 4.33 4.76 8.25 3.12 21.66 6.20 15.11 19.25 3.12 29.70 23.66 26.66 15.71 4.30 2.65 6.15 2.98 2.78 1.79 1.67 8.49 5.84 2.99 3 352303 Transcript 0 175.51 225.29 291.75 219.32 236.88 152.30 136.88 257.25 87.76 378.08 455.12 329.88 96.83 407.12 499.41 568.74 275.78 195.31 161.84 232.50 129.45 283.11 230.01 4 382671 Transcript 0 18.60 12.37 4.91 10.09 0.00 0.00 0.00 4.89 1.07 4.97 0.00 0.00 0.00 0.00 10.63 35.29 4.58 24.71 16.19 15.66 0.00 0.00 4.35 5 ER1a ExonRegion 0 2.44 6.03 0.74 2.57 6.50 14.88 2.80 2.35 0.06 2.48 3.13 1.08 0.00 2.10 1.66 5.06 0.14 7.65 1.14 3.08 5.51 0.93 4.77 6 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.13 0.00 0.00 0.00 7 E1_Ac KnownBoundary 0 16.08 26.44 3.90 4.03 3.57 18.34 19.43 3.41 1.27 8.00 11.53 0.00 6.01 27.43 31.40 20.34 7.39 7.25 18.82 9.78 16.56 8.08 20.32 8 ER1b ExonRegion 0 35.98 29.15 6.94 6.59 11.59 24.45 37.07 2.59 5.76 14.53 28.03 0.00 0.00 63.88 44.97 37.65 17.05 8.62 6.37 11.35 26.08 25.35 21.54 9 ER1c ExonRegion 1 288.11 298.70 123.52 103.55 173.86 368.62 254.87 143.88 60.10 272.97 373.74 38.94 65.78 227.58 267.89 285.21 302.49 140.47 85.95 140.52 266.01 146.87 129.07 10 E1a_E2a KnownJunction 1 61.71 74.66 175.04 87.53 40.24 47.02 38.11 160.39 79.05 368.17 780.78 180.06 133.43 247.28 222.63 119.20 608.41 51.49 27.11 137.36 518.00 72.56 35.43 11 E1a_E3a KnownJunction 0 5.93 3.35 3.19 0.00 0.00 0.00 2.25 2.30 0.00 11.36 9.37 0.00 0.00 0.00 0.00 4.36 4.21 0.00 3.76 0.00 3.15 0.00 0.00 12 ER2a ExonRegion 1 122.14 114.24 256.40 219.84 93.62 56.41 60.25 275.48 111.41 507.66 820.55 194.50 99.14 668.34 671.51 541.30 532.15 238.73 175.88 301.67 390.89 321.73 239.47 13 E2a_E3a KnownJunction 1 192.33 224.37 314.63 243.46 140.15 98.69 86.65 244.68 100.66 397.74 347.14 276.24 91.88 658.55 839.11 822.86 292.94 276.99 231.44 286.03 125.41 325.15 352.21 14 E2a_E3b KnownJunction 0 18.60 12.37 4.91 10.09 0.00 0.00 0.00 4.89 1.07 4.97 0.00 0.00 0.00 0.00 10.63 35.29 4.58 24.71 16.19 15.66 0.00 0.00 4.35 15 I2 Intron 0 17.77 20.85 20.72 36.63 37.87 24.22 43.79 58.89 17.16 81.01 53.20 78.23 90.94 25.33 21.36 31.63 23.66 21.45 16.64 23.69 20.87 34.84 15.33 16 I2_SR1 SilentIntronRegion 0 13.88 22.56 19.27 33.73 34.34 22.89 45.08 57.95 15.74 68.46 44.67 77.59 82.76 20.33 18.36 31.25 21.25 15.67 12.40 21.61 15.83 28.49 15.85 17 I2_AR1 ActiveIntronRegion 0 32.93 29.47 40.13 62.11 53.46 31.44 47.37 102.94 26.01 158.11 90.90 101.09 145.46 47.90 39.74 58.31 50.69 63.27 39.81 48.54 51.48 53.41 33.01 18 I2_AR2 ActiveIntronRegion 0 11.04 15.59 17.30 27.25 30.48 14.64 38.48 42.80 15.87 67.51 38.28 87.44 116.08 19.28 15.81 20.89 15.82 8.82 10.51 16.08 7.04 35.27 6.88 19 I2_AR3 ActiveIntronRegion 0 18.44 17.89 14.82 33.03 38.20 28.62 45.75 47.09 15.31 64.33 51.44 65.52 60.46 22.39 18.84 24.66 16.55 13.24 13.18 18.16 17.47 33.21 10.44 20 I2_SR4 SilentIntronRegion 0 10.78 15.40 7.27 19.59 35.14 14.23 26.66 37.66 10.87 37.65 48.66 35.33 35.21 21.78 10.83 20.21 16.72 6.55 4.76 7.57 22.04 18.72 8.57 21 ER3a ExonRegion 0 160.61 222.59 343.63 250.93 235.16 138.84 158.01 324.70 107.35 489.20 527.52 443.21 115.91 546.72 523.55 596.04 301.61 247.23 166.37 236.53 141.86 318.06 240.55 22 E3_Da KnownBoundary 0 50.23 30.52 32.70 29.07 80.31 16.13 60.19 92.09 20.31 118.86 84.97 141.05 34.09 28.14 20.52 44.43 25.15 14.92 4.80 8.88 28.23 33.25 31.07 23 E3a_E3b KnownJunction 0 158.69 226.21 268.88 195.18 333.62 205.90 187.12 269.82 74.85 358.42 563.09 383.52 101.78 155.69 159.71 314.62 258.63 113.62 92.24 178.97 133.50 241.08 107.81 24 ER3b ExonRegion 0 6.84 7.61 27.86 9.90 77.47 8.10 52.74 72.37 11.17 101.51 76.35 105.57 62.82 15.09 8.94 12.20 7.56 3.46 2.26 3.59 25.32 20.35 7.17 25 E3_Ab KnownBoundary 0 7.19 6.25 31.28 14.72 62.39 16.69 70.04 88.60 20.66 99.74 75.07 19.66 33.28 0.00 6.06 12.73 27.77 0.00 0.00 9.72 24.03 15.43 8.45 26 ER3c ExonRegion 0 112.14 253.53 355.69 316.31 433.67 384.86 424.87 393.77 126.88 607.15 727.54 362.57 176.35 339.41 239.01 211.40 247.03 139.99 68.86 180.04 182.35 269.30 77.95 27 E3_Db NovelBoundary 1 22.67 78.87 19.93 52.41 67.57 54.85 81.70 66.54 26.62 89.26 28.59 43.21 120.77 21.78 0.00 12.48 20.29 4.39 8.19 15.15 8.65 30.86 11.87 28 E3b_E4a KnownJunction 0 245.75 594.96 307.74 331.59 509.25 1014.93 762.51 348.23 117.36 574.12 594.26 355.77 226.45 416.80 396.19 300.18 383.54 107.86 93.56 272.99 179.83 349.34 90.31 29 I3 Intron 0 29.44 41.68 24.06 51.54 61.38 20.58 52.66 60.34 18.86 70.49 49.52 94.65 70.75 19.89 18.32 21.03 13.69 6.28 7.00 17.65 9.68 31.01 8.60 30 I3_SR1 SilentIntronRegion 0 30.29 43.34 25.08 53.68 63.78 21.44 54.71 62.74 19.71 73.47 51.52 98.67 73.61 20.76 19.03 21.87 14.26 6.56 7.31 18.37 10.12 32.26 8.99 31 ER4a ExonRegion 0 267.69 679.91 408.66 427.64 307.71 844.51 567.08 437.26 146.78 736.91 591.47 480.18 365.61 611.37 518.07 326.73 450.95 84.16 96.50 285.35 172.54 375.18 105.92 32 E4a_E5a KnownJunction 0 376.07 884.05 479.34 523.14 284.04 515.90 478.55 488.82 168.40 809.43 761.09 770.95 403.71 789.46 665.18 404.17 530.06 75.94 168.00 308.91 193.80 452.09 122.67 33 ER5a ExonRegion 0 473.13 681.18 601.12 632.38 329.06 354.09 355.34 586.48 199.72 933.12 1049.10 901.18 381.73 906.13 734.15 558.69 672.78 185.01 204.12 416.56 265.94 516.81 209.51 34 E5a_E6a KnownJunction 0 718.13 493.27 661.42 669.48 414.77 334.47 332.41 582.06 196.64 927.95 983.30 1115.76 409.55 929.14 786.08 790.56 578.77 280.27 241.51 468.00 265.09 514.97 277.26 35 ER6a ExonRegion 0 544.41 482.24 604.13 615.93 354.27 374.79 357.68 556.65 190.19 973.10 1006.42 1060.95 511.16 985.89 786.78 715.18 693.38 296.90 253.98 403.68 389.65 491.25 298.89 36 E6a_E7a KnownJunction 0 774.51 731.91 612.10 543.02 246.01 288.70 300.17 477.28 142.21 865.33 814.94 962.26 417.34 809.35 648.62 637.78 511.27 348.87 144.76 352.18 355.71 326.50 255.15 37 I6 Intron 0 66.11 52.06 26.04 54.34 41.97 27.15 32.28 43.37 20.87 50.02 21.66 42.10 39.33 40.17 37.72 33.70 20.62 18.03 13.84 19.79 6.73 24.19 16.35 38 I6_AR1 ActiveIntronRegion 0 20.88 19.90 4.07 20.96 21.33 13.58 11.09 19.53 5.57 12.80 11.23 13.46 40.94 33.18 31.13 21.61 11.51 16.88 15.50 9.95 8.10 13.57 20.64 39 I6_SR1 SilentIntronRegion 0 31.07 26.60 5.06 29.24 33.49 28.10 29.32 26.48 7.27 20.46 15.56 44.34 61.42 44.87 30.70 33.56 23.00 17.14 27.44 23.82 11.48 24.46 23.92 40 I6_AR2 ActiveIntronRegion 0 62.55 62.81 35.30 70.18 46.08 28.93 38.69 55.23 27.61 65.51 24.91 44.85 44.42 45.67 43.37 41.93 23.10 21.73 13.80 24.11 6.86 27.09 18.60 41 I6_AR3 ActiveIntronRegion 0 105.36 42.96 14.32 29.25 41.51 26.71 23.32 25.24 11.89 29.97 19.20 37.78 19.49 29.76 31.42 18.06 18.46 9.62 9.89 10.56 5.84 21.84 8.16 42 E7_Aa NovelBoundary 0 320.80 70.25 72.85 109.28 73.26 73.25 52.16 109.87 46.15 87.92 43.96 101.13 19.48 57.27 47.47 27.17 63.11 47.63 4.80 20.52 12.91 30.92 12.38 43 ER7a ExonRegion 0 566.54 614.65 535.20 394.79 288.98 362.11 336.60 477.05 158.22 839.63 904.31 874.23 500.19 1020.35 805.39 731.77 584.05 400.38 271.51 342.76 469.50 382.82 262.39 44 E7_Da NovelBoundary 0 181.07 85.84 61.94 79.51 89.64 34.81 36.70 85.27 26.71 57.83 40.69 59.57 42.21 92.53 42.03 92.45 38.71 58.95 17.79 8.56 28.29 24.62 18.95 45 E7a_E8a KnownJunction 0 528.69 709.08 598.00 434.84 523.77 528.22 508.49 539.14 192.56 937.64 1005.36 881.54 430.00 1130.03 1096.98 896.94 713.04 443.14 413.66 381.33 601.96 490.97 295.70 46 E8_Aa NovelBoundary 0 232.26 57.69 104.67 116.04 48.30 47.19 42.35 85.39 44.82 94.47 62.75 38.86 25.49 87.47 60.20 59.81 70.22 44.23 25.60 40.97 24.65 28.78 32.01 47 ER8a ExonRegion 0 494.24 539.40 604.81 550.05 269.10 385.59 369.15 482.69 167.79 829.87 706.51 590.28 199.70 882.32 865.56 644.69 560.13 301.12 222.72 317.17 428.71 341.45 250.01 48 E8a_E9a KnownJunction 0 799.33 597.46 773.33 728.45 375.30 424.53 413.50 562.47 194.04 802.55 854.64 284.79 159.08 968.16 843.56 644.36 546.05 350.24 243.96 329.75 420.52 327.05 269.24 49 E9_Aa NovelBoundary 0 40.23 50.06 49.85 81.41 107.47 52.58 32.50 65.84 13.40 67.56 34.64 6.30 19.48 14.66 23.86 40.93 3.65 33.95 34.26 25.12 4.63 26.21 12.38 50 ER9a ExonRegion 0 565.71 460.78 812.85 659.74 348.36 508.63 383.53 569.10 184.17 941.17 886.65 269.66 212.61 1000.56 955.48 787.33 707.02 429.35 320.56 347.48 457.46 445.31 324.20 51 E9a_E10a KnownJunction 0 856.82 510.76 886.28 626.89 382.68 647.13 476.43 641.33 188.74 1031.71 829.47 311.35 273.36 1008.54 1296.50 863.11 727.35 445.38 435.97 379.60 389.14 498.56 382.77 52 E9a_E12a NovelJunction 0 20.89 0.00 4.20 3.36 3.57 2.38 2.25 6.90 9.06 1.37 26.38 13.80 0.00 31.84 21.51 3.25 13.46 0.00 4.71 0.00 29.34 8.70 7.60 53 E10_Aa NovelBoundary 0 165.36 119.06 45.21 86.54 30.98 69.45 43.37 59.97 26.71 61.57 13.11 36.91 0.00 16.60 49.20 37.94 14.31 13.51 27.39 12.53 0.00 26.09 7.26 54 ER10a ExonRegion 0 724.55 488.56 850.76 679.76 350.39 488.56 415.85 627.45 188.27 895.22 825.92 291.46 166.24 960.70 980.19 758.22 613.19 517.23 288.45 360.15 415.60 367.37 308.42 55 E10a_E11a KnownJunction 0 1067.23 680.67 908.48 883.50 354.92 544.12 547.79 665.48 209.52 943.07 799.83 427.19 189.60 933.90 1115.52 871.99 609.16 569.98 262.22 327.58 438.19 427.78 375.94 56 ER11a ExonRegion 0 668.06 526.68 658.19 544.25 225.65 380.49 343.25 540.64 176.54 885.57 723.09 265.06 156.13 834.27 958.68 625.70 505.94 331.76 234.95 291.83 356.66 287.77 249.59 57 E11a_E12a KnownJunction 0 597.88 423.87 577.51 440.60 268.34 343.95 263.83 521.68 165.62 847.58 580.09 244.28 224.17 879.34 973.98 476.46 459.28 227.87 203.58 368.74 250.69 212.66 176.36 58 I11_AR4 ActiveIntronRegion 0 67.84 24.62 14.12 22.24 33.24 31.75 37.14 40.94 6.63 27.59 8.44 9.11 16.79 1.03 14.96 25.97 29.36 24.80 8.72 3.25 8.58 12.06 1.55 59 I11_AR5 ActiveIntronRegion 0 60.61 34.66 16.15 26.64 41.84 33.26 42.49 43.92 7.69 32.11 8.26 8.46 21.74 8.79 29.41 39.18 22.51 27.46 18.97 6.38 8.92 15.53 2.94 60 ER12a ExonRegion 1 261.38 183.58 316.55 275.67 113.55 158.75 117.07 336.65 116.74 577.48 428.98 127.52 51.40 531.43 673.27 343.57 309.61 213.13 177.54 184.18 225.20 228.60 134.46 61 ER12b ExonRegion 0 12.70 6.10 2.45 4.77 6.69 1.83 7.28 0.86 3.71 10.90 24.16 0.00 0.00 21.11 23.21 11.89 3.30 1.85 0.00 2.13 4.41 6.25 5.87 62 ER12c ExonRegion 0 2.12 2.03 1.23 0.00 2.68 1.83 2.65 0.00 1.24 3.44 5.80 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 2.08 0.00