Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BET1L Gene 0 88.46 74.49 80.90 104.41 39.06 61.17 30.48 108.38 43.73 145.51 112.78 83.41 91.35 159.88 174.10 202.68 135.97 100.69 74.63 63.23 231.08 165.93 130.88 2 382762 Transcript 0 0.05 2.43 0.00 0.03 0.00 3.27 0.00 0.00 0.03 1.10 2.31 0.00 0.00 6.21 2.27 3.04 5.02 0.00 2.15 0.00 1.34 2.04 0.00 3 410108 Transcript 0 0.00 0.00 2.02 0.59 0.68 0.54 0.22 0.00 1.09 0.80 0.00 1.69 0.00 0.00 0.80 0.30 0.00 0.22 0.54 0.18 0.72 0.25 2.12 4 325147 Transcript 0 1.06 2.03 0.00 0.00 4.01 0.00 0.00 0.00 0.00 2.29 1.93 0.00 0.00 2.44 4.35 1.49 0.00 0.00 0.00 2.13 0.00 0.00 11.75 5 479463 Transcript 0 3.29 1.01 3.78 4.48 2.44 3.47 2.23 3.81 2.28 3.67 2.47 2.86 0.08 4.67 4.84 14.41 3.25 8.87 2.28 5.02 6.02 8.51 4.10 6 486280 Transcript 0 0.25 0.72 0.87 0.24 0.63 1.96 0.79 0.93 0.82 1.54 1.37 0.42 0.00 4.43 2.53 3.17 0.39 0.87 0.76 0.76 4.60 1.48 1.04 7 332865 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 IG5 Intergenic 0 6.89 9.87 19.19 5.81 9.79 29.88 18.66 24.33 12.85 60.35 64.26 17.44 16.03 54.05 45.03 51.19 50.50 36.43 24.57 33.54 66.77 35.75 29.11 9 IG5_AR1 ActiveIntergenicRegion 0 6.91 9.90 19.24 5.83 9.81 29.95 18.71 24.39 12.89 60.51 64.43 17.48 16.07 54.19 45.15 51.33 50.64 36.52 24.63 33.63 66.95 35.84 29.19 10 ER1a ExonRegion 0 0.05 2.43 0.00 0.03 0.00 3.27 0.00 0.00 0.03 1.10 2.31 0.00 0.00 6.21 2.27 3.04 5.02 0.00 2.15 0.00 1.34 2.04 0.00 11 E1_Ab KnownBoundary 0 0.00 0.00 0.00 3.46 0.00 0.00 0.00 0.00 1.74 1.40 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.69 0.00 12 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Ad KnownBoundary 0 0.00 7.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.51 0.00 0.00 0.00 0.00 0.00 0.00 15.71 0.00 0.00 0.00 0.00 0.00 3.24 14 ER1b ExonRegion 0 2.12 6.10 1.23 1.36 0.00 7.34 0.00 0.00 1.24 3.44 7.73 0.00 0.00 12.99 23.21 5.94 19.81 0.00 3.19 0.00 6.61 14.58 0.00 15 ER1c ExonRegion 0 4.23 6.10 1.84 1.36 0.00 7.34 1.32 0.00 1.24 4.01 8.21 1.08 0.00 12.99 28.29 8.92 19.81 0.00 3.19 0.53 9.37 19.27 0.73 16 ER1d ExonRegion 1 14.17 23.18 6.60 3.58 6.07 11.35 4.47 0.65 2.26 15.96 25.95 8.72 5.13 16.93 41.82 50.05 30.10 4.61 4.97 9.99 33.44 33.48 40.09 17 E1a_E3a KnownJunction 0 6.59 35.39 8.63 8.39 4.07 2.38 4.28 3.70 5.53 22.16 25.95 24.91 40.74 16.89 17.80 63.66 40.02 10.32 0.00 0.00 18.16 17.15 46.78 18 ER2a ExonRegion 0 0.50 1.45 1.73 0.48 1.27 3.91 1.57 1.86 0.49 1.42 2.73 0.85 0.00 6.56 5.06 6.35 0.78 1.74 1.51 1.51 6.06 2.97 2.09 19 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.16 1.67 0.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 20 ER3a ExonRegion 0 19.25 19.37 19.26 17.41 3.99 5.33 5.74 19.67 13.51 45.69 56.08 36.08 26.20 36.32 51.90 39.25 52.81 21.09 21.94 27.25 97.77 33.01 27.22 21 E3_Da KnownBoundary 0 0.00 3.35 0.00 1.40 0.00 11.02 1.90 2.42 0.00 5.64 0.00 0.00 0.00 7.18 0.00 8.03 4.77 2.11 4.61 3.26 14.89 0.00 0.00 22 E3a_E3c KnownJunction 1 11.78 14.34 80.60 65.73 8.40 18.51 12.81 71.30 20.46 126.22 117.56 42.76 13.64 98.77 195.56 49.90 181.21 74.45 37.08 71.97 324.21 115.98 56.25 23 ER3b ExonRegion 1 14.38 14.31 58.18 45.68 6.18 22.07 10.18 57.58 18.91 99.23 110.31 51.80 24.58 91.68 126.05 43.04 167.32 50.91 38.11 53.85 299.86 105.61 38.38 24 ER3c ExonRegion 0 3.29 1.01 3.78 4.48 2.44 3.47 2.23 3.81 2.28 3.67 2.47 2.86 0.08 4.67 4.84 14.41 3.25 8.87 2.28 5.02 6.02 8.51 4.10 25 E3_Ac KnownBoundary 0 5.93 5.99 5.50 1.37 0.00 0.00 5.26 7.31 1.42 2.18 2.05 0.00 0.00 4.83 4.45 8.20 9.54 14.72 0.00 0.00 2.97 8.02 0.00 26 ER3d ExonRegion 1 28.91 28.58 72.63 71.28 15.00 22.66 16.19 88.27 41.75 126.06 122.01 52.42 24.54 190.86 210.96 240.95 132.45 124.72 78.44 92.29 237.69 205.90 165.50 27 E3_Db KnownBoundary 0 17.26 13.42 18.83 11.12 0.00 10.90 13.60 26.49 4.77 26.70 7.48 6.30 6.82 39.85 39.06 71.09 25.25 33.54 24.94 38.35 25.02 34.41 32.18 28 E3b_E3d KnownJunction 1 33.12 37.95 51.36 69.79 19.69 22.37 8.66 74.59 40.28 112.36 137.98 69.47 27.11 131.73 140.68 304.45 90.79 105.04 52.90 44.29 213.13 150.76 178.92 29 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 1.67 0.00 6.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.43 30 ER3e ExonRegion 0 15.83 16.90 20.18 15.44 7.25 12.49 8.86 23.53 7.86 25.24 18.92 9.18 5.91 33.68 28.97 43.95 30.03 36.80 22.21 35.41 36.41 34.39 27.63 31 E3_Ad KnownBoundary 0 12.97 34.47 32.94 18.65 7.56 10.39 11.84 25.26 10.91 27.86 13.95 5.85 6.82 39.20 29.54 53.58 30.76 32.46 22.49 18.60 43.74 44.03 20.57 32 ER3f ExonRegion 1 26.55 67.97 76.16 94.37 20.76 48.01 19.10 111.14 44.31 161.47 148.31 89.61 41.22 176.49 158.51 290.37 113.03 131.53 43.73 70.73 253.36 181.58 213.66 33 E3_Dc KnownBoundary 1 32.45 57.88 67.77 104.38 26.49 87.45 27.07 112.95 34.46 174.04 140.14 101.58 24.67 194.95 170.72 279.16 100.61 95.05 32.94 79.00 224.81 178.74 204.36 34 ER3g ExonRegion 0 46.44 68.15 66.03 91.55 25.62 68.69 24.98 113.30 49.14 175.28 144.63 95.75 71.90 195.19 136.02 204.35 168.33 104.28 72.27 79.56 316.97 204.89 152.53 35 E3_Dd KnownBoundary 0 109.95 102.88 46.60 90.03 11.38 86.03 35.02 68.63 44.47 132.43 67.96 23.71 25.65 159.93 116.94 201.14 139.13 77.64 38.50 76.44 190.27 145.12 134.87 36 ER3h ExonRegion 0 143.23 115.72 124.44 162.96 62.15 93.37 47.40 166.09 66.02 218.99 166.33 126.56 146.15 238.83 268.63 306.13 202.27 151.06 114.19 91.36 339.37 246.81 194.83 37 ER3i ExonRegion 0 1.06 2.03 0.00 0.00 4.01 0.00 0.00 0.00 0.00 2.29 1.93 0.00 0.00 2.44 4.35 1.49 0.00 0.00 0.00 2.13 0.00 0.00 11.75 38 I3_AR2 ActiveIntronRegion 0 10.92 3.51 6.39 15.23 4.16 0.94 0.28 22.48 2.36 8.17 10.06 7.22 8.24 9.05 13.99 14.59 11.60 2.63 4.28 2.62 14.09 18.15 12.00 39 ER4a ExonRegion 0 0.00 0.00 6.23 1.45 0.00 0.48 0.01 0.01 1.93 1.67 0.00 1.30 0.00 0.00 1.33 1.29 0.00 0.55 0.00 0.00 2.25 0.54 2.23 40 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER5a ExonRegion 0 0.00 0.00 4.99 2.07 0.00 0.00 0.00 0.00 1.12 1.46 0.00 0.63 0.00 0.00 1.42 0.49 0.00 0.76 0.00 0.00 1.96 0.97 3.07 42 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER6a ExonRegion 0 0.00 0.00 0.92 0.00 4.05 2.78 1.34 0.00 1.85 0.00 0.00 2.19 0.00 0.00 2.07 0.00 0.00 0.00 3.22 1.07 0.09 0.00 0.00