Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LRDD Gene 0 37.21 17.84 90.21 83.05 19.96 44.34 25.15 135.44 31.69 189.10 111.00 35.45 26.30 161.69 143.57 130.85 104.04 118.40 49.00 44.35 209.79 29.91 69.14 2 347755 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 407926 Transcript 0 21.39 7.09 35.29 31.96 3.31 27.22 12.54 94.12 25.17 115.77 26.41 4.76 4.92 49.75 40.41 37.11 23.47 68.05 23.37 23.47 79.82 12.33 18.51 4 432865 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 444618 Transcript 0 10.08 9.54 23.74 25.34 3.48 27.94 3.97 13.06 3.36 24.69 25.48 0.00 0.00 22.07 4.82 3.42 4.58 15.30 0.00 6.46 15.32 2.45 11.52 6 411829 Transcript 0 10.58 5.08 5.51 9.54 8.03 11.00 10.59 15.56 4.32 21.22 26.09 0.00 0.00 17.05 15.96 44.58 23.11 28.64 4.78 8.51 38.56 4.17 22.02 7 IG36_AR1 ActiveIntergenicRegion 0 6.44 2.65 22.17 16.88 9.23 7.28 5.24 34.73 10.77 56.69 16.67 10.52 8.28 27.90 34.96 25.86 13.04 16.41 17.47 13.62 26.44 11.29 18.78 8 IG36_SR1 SilentIntergenicRegion 0 1.96 0.25 7.67 2.15 3.49 3.25 1.93 4.47 3.10 15.26 4.75 1.14 0.28 12.76 7.38 8.59 4.30 9.60 5.60 3.85 10.17 4.75 9.56 9 ER1a ExonRegion 0 28.43 8.80 4.12 8.75 7.35 19.68 17.25 13.23 3.54 16.74 26.92 0.00 0.00 19.93 28.84 55.18 34.04 34.14 11.89 17.15 54.86 3.27 32.17 10 E1a_E2b KnownJunction 0 29.12 15.26 6.53 28.53 20.71 15.84 21.33 48.55 11.49 28.10 53.49 16.66 0.00 12.07 34.49 89.21 50.68 75.32 7.06 14.00 60.23 2.33 44.64 11 I1 Intron 0 11.61 2.75 27.03 11.14 8.84 12.39 3.78 27.28 8.29 46.47 12.49 4.46 6.76 33.68 25.96 26.79 18.59 20.70 14.12 8.31 48.48 11.90 26.91 12 I1_AR1 ActiveIntronRegion 0 12.30 2.93 28.77 11.85 9.41 13.13 4.02 28.98 8.76 49.27 13.22 4.74 7.19 35.69 27.17 28.51 19.63 22.03 14.96 8.85 51.32 12.61 28.58 13 ER2a ExonRegion 0 10.58 5.08 5.51 9.54 8.03 11.00 10.59 15.56 4.32 21.22 26.09 0.00 0.00 17.05 15.96 44.58 23.11 28.64 4.78 8.51 38.56 4.17 22.02 14 ER2b ExonRegion 0 21.36 13.94 83.93 58.43 16.79 29.94 22.04 117.31 27.76 179.10 77.63 23.43 23.16 112.46 110.26 96.65 81.06 100.97 43.33 31.05 178.97 24.27 60.23 15 E2_Da NovelBoundary 0 16.15 12.43 54.58 37.02 8.57 9.77 12.76 16.47 2.92 48.06 27.95 19.81 0.00 50.21 28.80 33.07 36.75 57.33 13.55 27.87 47.38 9.06 19.38 16 E2a_E3a KnownJunction 0 28.67 11.77 44.03 47.21 4.33 38.95 19.03 140.31 37.88 188.92 20.11 0.00 0.00 59.45 39.68 30.85 33.19 86.51 36.52 27.42 100.33 6.18 26.80 17 E2a_E3b KnownJunction 1 28.52 10.98 24.87 22.21 0.00 13.69 5.61 44.28 5.06 54.29 73.44 16.81 0.00 146.39 121.39 64.09 73.02 25.95 8.28 20.33 92.42 19.35 44.64 18 I2 Intron 0 8.86 4.63 21.64 17.75 4.81 9.00 8.88 11.72 2.20 38.47 28.69 9.18 10.83 39.67 30.14 37.36 30.82 40.24 9.53 17.07 27.97 5.74 15.47 19 I2_AR1 ActiveIntronRegion 0 8.91 4.65 21.74 17.83 4.83 9.04 8.92 11.77 2.21 38.65 28.82 9.22 10.88 39.85 30.28 37.54 30.97 40.42 9.58 17.15 28.10 5.76 15.54 20 E3_Aa NovelBoundary 0 22.52 3.35 33.03 23.74 3.82 24.36 10.64 24.77 4.54 49.40 22.48 12.30 13.64 36.32 35.60 56.48 35.72 29.80 8.94 20.90 34.53 8.88 24.07 21 ER3a ExonRegion 0 35.50 9.50 48.95 47.34 5.61 42.72 18.60 139.75 37.62 155.21 56.97 14.27 14.76 87.38 77.10 80.49 37.23 115.77 33.58 40.04 139.12 30.81 28.74 22 E3_Ab KnownBoundary 1 23.34 19.40 64.87 66.19 24.02 17.49 33.56 164.05 42.74 156.55 70.39 12.45 32.79 84.05 88.63 103.99 34.03 154.17 44.99 54.59 149.93 21.13 19.72 23 ER3b ExonRegion 0 41.31 19.41 80.61 70.48 20.45 44.59 25.84 166.61 37.81 243.64 115.62 56.45 39.02 227.61 165.43 134.21 117.50 114.42 53.39 50.27 246.96 41.64 67.39 24 E3_Da NovelBoundary 0 37.78 23.94 104.49 67.12 23.01 57.01 35.33 175.88 33.85 236.90 69.39 55.37 33.44 113.19 122.88 80.15 81.35 77.64 30.68 28.19 130.60 23.45 32.78 25 E3a_E4a KnownJunction 0 32.82 9.08 25.43 8.39 4.33 8.46 3.84 46.62 10.21 49.45 50.22 25.21 12.82 85.41 82.45 31.87 80.22 25.78 3.95 2.88 124.30 11.63 19.04 26 I3 Intron 0 25.26 15.08 73.64 80.81 21.78 49.08 22.51 118.32 24.63 177.11 77.60 31.50 31.33 106.59 80.77 99.97 82.98 96.87 40.33 31.18 132.66 18.09 67.97 27 I3_AR1 ActiveIntronRegion 0 25.44 15.19 74.17 81.37 21.92 49.43 22.65 119.15 24.80 178.35 78.12 31.73 31.56 107.34 81.34 100.67 83.57 97.54 40.61 31.39 133.59 18.22 68.44 28 E4_Aa NovelBoundary 1 49.71 9.21 118.92 137.71 25.55 61.90 37.67 218.80 35.68 301.28 129.61 39.16 25.65 133.68 58.97 185.85 107.90 196.41 56.57 39.05 189.72 18.00 93.30 29 ER4a ExonRegion 0 39.65 20.03 110.91 106.85 31.01 67.75 32.09 195.69 37.18 261.89 159.11 75.70 62.58 232.37 190.67 209.25 143.73 213.43 61.31 46.40 293.07 39.10 116.40 30 E4a_E5a KnownJunction 0 56.68 21.84 139.14 124.63 62.99 90.91 41.25 268.34 36.69 314.77 149.62 70.22 47.07 229.33 192.35 224.21 179.24 204.90 93.74 43.72 319.27 43.35 126.93 31 ER5a ExonRegion 0 51.26 18.19 122.27 91.24 33.62 71.95 23.06 204.74 35.93 232.38 156.46 70.22 46.47 235.73 174.18 226.10 150.34 185.61 97.70 47.74 372.19 43.07 100.43 32 E5a_E6a KnownJunction 0 96.17 27.50 107.80 94.46 37.95 75.13 19.70 195.35 35.56 192.68 188.57 55.37 35.71 192.54 167.13 223.45 158.77 170.33 121.79 28.63 399.21 38.76 137.52 33 E6_Aa NovelBoundary 0 13.41 0.00 27.08 5.66 0.00 23.28 19.65 16.68 1.24 67.29 9.27 0.00 0.00 21.07 8.90 3.67 21.04 16.42 26.26 2.75 23.48 2.51 7.09 34 ER6a ExonRegion 0 40.42 21.11 90.17 66.28 14.44 40.28 23.48 148.35 25.95 171.41 123.97 47.71 35.64 158.26 151.01 112.54 103.00 101.71 54.80 36.73 238.62 24.35 75.22 35 E6a_E7a KnownJunction 0 56.53 11.31 121.67 123.13 26.06 20.22 15.50 155.18 39.12 192.73 173.62 42.76 32.14 179.71 143.03 171.24 113.23 147.66 75.77 46.79 256.93 34.47 86.81 36 E7_Aa NovelBoundary 0 10.08 21.71 35.54 16.98 16.13 18.51 20.49 37.83 7.47 73.68 17.21 0.00 0.00 16.95 42.03 23.33 26.37 39.01 18.73 14.96 41.51 2.82 14.77 37 ER7a ExonRegion 0 35.16 8.52 112.79 102.23 23.72 40.33 22.98 135.16 36.90 219.89 126.97 47.83 36.14 176.66 162.15 106.90 96.41 73.60 47.86 42.40 213.67 25.81 79.69 38 E7_Da NovelBoundary 0 6.89 0.00 14.84 16.12 0.00 0.00 0.00 51.59 6.42 79.57 18.11 32.56 13.64 46.68 45.99 62.80 34.78 49.87 9.51 6.01 40.59 16.41 7.09 39 E7a_E8a KnownJunction 0 42.08 20.59 121.91 129.29 19.27 25.33 27.60 175.55 44.99 234.77 106.82 30.31 30.68 167.99 76.52 126.55 125.48 92.40 35.01 39.05 217.58 49.48 112.25 40 ER8a ExonRegion 0 44.40 21.60 138.92 133.24 20.99 55.78 36.43 183.96 43.16 248.06 168.52 50.61 34.71 206.23 160.66 202.96 137.65 183.44 70.34 57.77 264.02 45.46 107.14 41 E8a_E9a KnownJunction 0 25.86 15.39 142.90 146.27 42.87 62.12 36.08 224.63 53.10 239.18 145.30 45.91 27.27 234.45 137.34 165.51 136.79 171.08 38.31 60.34 283.56 49.42 130.78 42 ER9a ExonRegion 0 38.18 25.69 125.15 109.83 15.51 47.54 24.27 179.96 40.86 232.26 151.71 42.45 28.71 187.83 176.60 176.22 127.89 168.62 72.85 52.86 258.79 47.37 98.16 43 E9a_E10a KnownJunction 0 61.94 29.14 100.26 111.91 14.09 51.50 26.37 138.38 52.95 185.45 162.41 49.52 20.94 231.50 139.44 186.79 150.44 126.93 63.81 68.01 303.08 40.78 93.13 44 ER10a ExonRegion 0 44.18 20.63 107.76 112.76 21.85 47.93 22.31 126.97 38.74 182.91 108.82 40.02 25.36 177.23 146.44 151.17 116.88 158.15 47.13 50.05 233.38 28.10 84.96 45 E10_Da KnownBoundary 0 50.75 35.98 113.66 108.61 55.86 77.29 37.36 150.13 38.17 199.88 77.34 30.91 19.97 88.88 126.83 109.71 77.14 148.15 70.12 55.03 182.80 20.02 81.35 46 E10a_E11a KnownJunction 0 0.00 0.00 12.89 1.33 0.00 0.00 0.00 2.30 0.00 3.17 2.16 0.00 0.00 2.41 4.45 0.00 0.00 1.87 0.00 2.94 0.00 0.00 0.00 47 E10_Db NovelBoundary 1 38.67 24.54 38.41 22.94 36.08 40.66 22.39 67.48 9.29 42.01 67.91 24.31 0.00 73.81 50.19 138.60 83.59 54.30 70.40 25.69 98.16 8.57 69.66 48 E10b_E11a KnownJunction 0 10.08 9.54 23.74 25.34 3.48 27.94 3.97 13.06 3.36 24.69 25.48 0.00 0.00 22.07 4.82 3.42 4.58 15.30 0.00 6.46 15.32 2.45 11.52 49 ER10b ExonRegion 0 49.61 33.68 90.22 98.21 41.47 77.71 37.90 124.88 40.06 179.56 109.81 34.91 14.66 150.54 126.39 136.35 105.22 130.73 83.62 56.78 194.34 20.18 84.43 50 E10_Dc NovelBoundary 0 32.45 16.71 36.75 17.61 11.80 46.51 17.53 40.42 9.37 63.21 30.96 6.30 0.00 53.92 75.04 76.65 34.60 22.30 41.51 8.56 102.43 5.51 37.05 51 E10c_E11a KnownJunction 0 33.78 13.94 44.68 59.30 26.49 29.98 27.29 97.80 42.01 100.03 70.39 30.01 6.82 108.95 118.67 121.93 104.16 88.67 44.42 37.58 105.39 8.94 32.86 52 ER10c ExonRegion 0 39.59 19.14 62.93 59.97 31.16 36.24 32.55 106.96 38.29 117.25 80.04 25.21 7.45 125.73 108.20 117.84 100.19 101.63 51.15 42.68 123.93 13.48 46.47 53 E11_Aa NovelBoundary 0 14.30 9.74 22.29 20.34 17.83 37.14 25.84 34.30 4.83 40.86 16.06 5.70 0.00 21.66 25.34 27.09 31.04 11.23 8.47 6.07 73.45 3.06 7.34 54 ER11a ExonRegion 0 38.13 22.85 79.37 81.11 16.43 43.33 27.39 90.20 20.63 142.73 87.44 20.84 16.77 138.29 132.65 117.03 94.00 110.47 51.20 42.67 177.93 18.88 49.59 55 E11a_E12a KnownJunction 0 39.71 42.95 92.96 111.64 11.12 76.83 22.52 127.99 26.01 176.94 85.71 11.70 12.66 140.92 120.77 129.88 120.43 127.43 66.35 38.67 184.22 13.96 68.55 56 ER12a ExonRegion 0 41.02 23.53 91.84 85.53 32.24 57.07 28.08 122.83 28.77 172.36 102.86 14.66 9.15 151.75 151.99 137.34 121.87 112.06 40.97 51.15 210.05 20.03 67.19 57 E12a_E13a KnownJunction 0 75.94 24.07 106.86 111.34 53.31 59.06 55.34 141.58 31.25 221.37 78.60 24.01 13.47 139.80 145.99 126.04 99.21 155.91 52.43 55.99 225.18 46.66 82.20 58 ER13a ExonRegion 0 75.76 28.02 97.34 102.00 39.94 84.57 49.82 119.57 41.52 177.26 100.77 27.44 23.59 163.82 155.00 180.86 116.55 129.67 50.31 61.98 217.49 32.39 75.36 59 E13_Da KnownBoundary 0 67.79 23.48 58.72 89.97 22.24 56.73 36.30 86.91 24.54 105.57 38.59 10.95 0.00 105.83 129.30 90.66 102.66 66.45 47.72 35.41 114.16 7.78 52.07 60 E13a_E14a KnownJunction 0 27.71 10.98 46.92 25.20 15.03 23.85 27.20 44.73 21.06 57.38 22.32 0.00 0.00 78.11 43.39 77.59 61.24 51.11 12.71 21.35 48.80 19.29 31.58 61 ER13b ExonRegion 0 46.36 15.59 64.42 77.12 14.32 38.87 22.20 77.81 18.84 115.37 68.52 26.06 7.45 106.01 85.16 52.16 75.92 63.15 32.73 36.17 140.73 10.17 39.04 62 E13b_E14a KnownJunction 0 41.64 23.81 87.49 80.71 20.03 22.77 20.93 83.30 22.16 130.33 85.13 36.76 22.08 116.84 87.64 60.92 78.17 73.91 26.92 22.75 146.84 16.17 43.62 63 ER14a ExonRegion 1 43.95 21.66 85.90 63.12 17.96 30.85 19.99 83.60 20.02 147.45 97.19 14.39 6.09 141.34 135.88 115.99 93.96 71.92 26.77 41.75 174.58 26.81 67.23 64 E14_Da NovelBoundary 0 34.38 9.87 13.54 29.20 18.76 31.74 16.87 60.09 12.73 62.27 24.48 6.30 0.00 34.96 32.88 12.22 4.77 37.89 31.44 10.99 91.00 8.70 12.89 65 E14a_E15a KnownJunction 0 39.41 15.79 65.14 36.89 27.08 23.40 12.41 52.00 15.13 95.66 73.70 18.46 11.53 157.57 129.43 106.13 88.83 57.95 29.27 49.22 99.09 16.29 38.41 66 I14 Intron 0 14.89 1.79 13.65 27.68 15.29 21.77 11.64 23.78 8.90 41.33 17.00 3.47 1.70 24.07 17.26 15.68 14.51 27.86 7.00 10.29 56.19 8.24 21.95 67 I14_AR1 ActiveIntronRegion 0 15.15 1.80 13.89 28.17 15.56 22.15 11.85 24.18 9.06 42.02 17.29 3.53 1.73 24.48 17.56 15.96 14.77 28.35 7.13 10.45 57.12 8.39 22.31 68 E15_Aa NovelBoundary 0 24.60 0.00 9.34 32.56 3.90 45.14 24.86 57.75 15.94 47.28 46.70 6.15 0.00 36.49 18.54 19.31 8.04 22.26 16.38 19.94 103.04 11.51 49.94 69 ER15a ExonRegion 0 40.18 17.19 103.03 97.41 22.54 52.44 29.55 119.64 38.30 182.23 121.62 16.50 11.84 172.64 175.38 116.72 108.43 124.88 41.22 55.90 217.45 29.94 49.04 70 E15a_E16a KnownJunction 1 28.45 24.93 145.94 197.24 22.07 72.80 45.58 200.65 57.32 244.69 180.36 19.36 13.64 195.77 189.63 195.16 108.74 195.41 86.40 69.67 247.60 40.72 86.64 71 E16_Aa NovelBoundary 1 9.63 6.58 3.10 7.26 12.48 10.45 9.01 32.90 6.68 26.27 29.80 0.00 6.66 17.60 32.51 57.25 8.88 15.55 13.18 9.59 30.33 2.69 7.85 72 ER16a ExonRegion 0 26.57 10.76 66.79 82.86 14.07 30.78 16.62 112.30 24.79 143.71 95.23 17.60 14.06 111.13 118.31 104.21 82.70 78.59 37.04 39.51 135.67 23.17 45.65 73 ER16b ExonRegion 0 0.00 1.02 0.00 2.04 0.00 0.00 0.00 6.05 1.24 2.29 2.42 0.00 0.00 0.41 3.63 0.74 1.65 1.85 0.00 1.06 1.65 0.00 0.73 74 IG35 Intergenic 0 1.56 3.20 14.57 3.84 3.99 7.66 3.61 32.13 5.02 30.78 10.50 1.16 1.64 11.65 11.44 7.27 6.04 20.80 10.14 10.37 5.04 2.94 2.34 75 IG35_SR3 SilentIntergenicRegion 0 0.70 0.37 6.63 2.06 2.22 2.29 1.56 15.46 3.69 11.66 4.21 2.04 0.36 6.87 7.16 3.83 3.54 7.90 5.24 1.98 4.63 2.88 1.89 76 IG35_AR3 ActiveIntergenicRegion 0 0.83 2.72 13.29 4.43 1.78 6.65 2.54 24.07 4.55 24.68 9.62 0.42 1.59 12.00 9.65 6.21 4.87 16.99 11.57 5.90 4.50 2.77 1.54 77 IG35_SR2 SilentIntergenicRegion 0 2.52 4.92 17.86 4.36 6.23 9.88 5.42 47.85 6.82 42.75 15.00 1.99 1.60 15.21 15.83 10.65 7.71 30.65 12.86 18.83 6.11 3.17 3.60 78 IG35_AR2 ActiveIntergenicRegion 0 0.00 0.00 39.82 9.99 8.03 14.67 7.94 57.04 6.79 85.44 21.58 0.00 0.00 10.29 24.66 8.92 14.30 46.81 18.05 38.65 3.67 2.08 2.94 79 IG35_SR1 SilentIntergenicRegion 0 2.71 6.71 29.69 5.40 9.99 17.94 7.16 59.29 6.18 66.89 16.60 0.00 4.74 14.09 17.20 11.40 12.62 39.88 11.27 20.82 6.53 3.84 3.40