Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC25A22 Gene 0 28.45 32.69 121.74 35.79 19.22 57.98 21.92 153.99 37.28 191.50 61.08 19.30 21.04 111.39 129.80 66.86 46.08 91.80 60.55 65.83 107.54 48.39 50.55 2 320230 Transcript 0 23.57 25.70 110.89 28.33 12.22 42.89 19.49 121.57 34.15 156.89 51.36 13.32 15.91 88.12 114.61 45.35 36.85 70.99 45.07 58.49 98.93 32.36 37.84 3 456706 Transcript 0 0.00 0.00 0.00 0.00 0.00 7.35 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 4 481290 Transcript 0 0.98 0.08 1.78 0.29 0.13 0.18 0.09 4.36 1.14 4.91 1.38 0.34 0.02 2.28 3.00 0.99 1.07 3.24 0.11 1.30 2.35 0.11 0.70 5 IG35 Intergenic 0 1.56 3.20 14.57 3.84 3.99 7.66 3.61 32.13 5.02 30.78 10.50 1.16 1.64 11.65 11.44 7.27 6.04 20.80 10.14 10.37 5.04 2.94 2.34 6 IG35_SR3 SilentIntergenicRegion 0 0.70 0.37 6.63 2.06 2.22 2.29 1.56 15.46 3.69 11.66 4.21 2.04 0.36 6.87 7.16 3.83 3.54 7.90 5.24 1.98 4.63 2.88 1.89 7 IG35_AR3 ActiveIntergenicRegion 0 0.83 2.72 13.29 4.43 1.78 6.65 2.54 24.07 4.55 24.68 9.62 0.42 1.59 12.00 9.65 6.21 4.87 16.99 11.57 5.90 4.50 2.77 1.54 8 IG35_SR2 SilentIntergenicRegion 0 2.52 4.92 17.86 4.36 6.23 9.88 5.42 47.85 6.82 42.75 15.00 1.99 1.60 15.21 15.83 10.65 7.71 30.65 12.86 18.83 6.11 3.17 3.60 9 IG35_AR2 ActiveIntergenicRegion 0 0.00 0.00 39.82 9.99 8.03 14.67 7.94 57.04 6.79 85.44 21.58 0.00 0.00 10.29 24.66 8.92 14.30 46.81 18.05 38.65 3.67 2.08 2.94 10 IG35_SR1 SilentIntergenicRegion 0 2.71 6.71 29.69 5.40 9.99 17.94 7.16 59.29 6.18 66.89 16.60 0.00 4.74 14.09 17.20 11.40 12.62 39.88 11.27 20.82 6.53 3.84 3.40 11 ER1a ExonRegion 0 3.02 2.90 20.98 3.86 1.52 1.57 0.38 23.65 6.72 46.73 12.58 3.82 0.94 15.73 32.17 32.51 13.22 20.38 12.71 12.54 37.52 8.31 20.16 12 E1a_E3b KnownJunction 0 0.00 0.00 29.39 10.35 0.00 0.00 0.00 33.72 11.49 46.44 11.85 0.00 0.00 19.25 39.19 28.80 16.08 45.06 0.00 27.04 51.09 2.69 15.37 13 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E2_Da NovelBoundary 0 11.11 6.45 6.36 0.00 0.00 24.42 6.40 31.71 5.01 10.88 12.69 5.40 0.00 12.95 4.45 23.93 13.65 34.74 27.58 19.11 2.78 8.76 12.72 15 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 14.71 0.00 2.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.24 0.00 0.00 0.00 0.00 16 ER3a ExonRegion 0 0.00 0.00 3.15 0.39 0.00 0.00 0.00 4.94 1.76 6.72 1.10 0.62 0.00 3.94 3.73 2.55 2.83 8.45 0.00 2.74 5.04 0.00 1.68 17 ER3b ExonRegion 1 8.59 11.64 56.64 12.92 5.60 19.44 6.42 80.12 15.47 110.73 45.36 8.42 8.22 60.00 86.46 82.65 23.94 84.40 56.55 42.44 71.18 33.60 60.69 18 E3a_E4a KnownJunction 1 21.26 30.19 153.54 29.17 20.54 36.97 12.32 180.52 34.78 221.10 87.65 31.51 13.64 109.78 165.40 134.58 31.04 136.17 121.89 73.12 106.44 91.85 83.66 19 ER4a ExonRegion 0 17.67 19.64 112.88 41.73 13.78 44.36 17.25 147.51 33.24 204.39 53.92 19.45 6.59 93.26 123.42 54.11 31.57 99.66 57.92 73.22 109.17 37.57 43.09 20 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E4a_E5b KnownJunction 0 44.60 21.25 128.88 44.38 43.63 43.84 21.90 195.18 32.23 255.89 40.12 38.11 0.00 81.82 121.76 29.05 43.95 90.74 11.58 97.47 96.00 36.37 29.96 22 ER5a ExonRegion 0 2.95 0.24 2.18 0.48 0.39 0.55 0.26 8.14 1.66 8.00 3.03 0.40 0.06 2.88 5.27 0.43 0.39 1.26 0.34 1.18 2.00 0.33 0.43 23 E5_Ab KnownBoundary 0 3.11 0.00 1.83 0.00 0.00 0.00 0.00 4.56 4.51 9.94 0.00 0.00 0.00 0.00 5.44 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 24 ER5b ExonRegion 1 27.48 39.56 147.58 40.07 24.91 54.45 32.88 209.93 45.07 281.10 78.02 24.25 9.12 120.92 129.71 79.11 38.59 143.15 55.43 96.21 126.89 41.63 51.36 25 E5_Da NovelBoundary 0 0.00 6.18 10.97 3.30 3.74 7.67 0.00 1.73 4.31 9.54 5.37 0.00 0.00 12.24 26.82 23.84 0.00 20.56 8.85 2.36 13.78 3.12 3.84 26 E5a_E6a KnownJunction 1 52.31 88.47 183.94 56.94 27.08 83.25 54.76 215.93 57.38 283.72 138.93 26.11 40.42 144.51 142.90 173.89 50.58 206.69 125.65 134.74 170.69 84.44 82.03 27 I5_SR1 SilentIntronRegion 1 3.73 0.65 20.40 3.94 1.93 9.12 4.20 33.66 5.83 28.68 13.70 4.67 2.54 15.68 25.48 11.97 5.01 16.88 10.60 6.30 9.73 3.23 1.43 28 I5_AR2 ActiveIntronRegion 0 11.78 3.98 5.67 1.38 2.71 6.43 2.53 19.06 7.29 20.10 5.85 2.64 0.00 12.99 20.56 8.05 3.40 6.16 10.34 4.35 5.59 0.66 2.04 29 ER6a ExonRegion 0 21.14 29.08 143.34 49.09 21.08 58.62 27.45 165.62 45.73 221.33 80.34 35.16 21.78 121.97 144.48 85.13 49.95 156.77 87.88 77.12 153.55 53.69 58.28 30 E6_Da NovelBoundary 0 6.89 3.09 12.63 1.53 0.00 2.10 0.00 12.08 3.79 14.48 2.68 0.00 0.00 7.18 4.70 7.69 16.74 8.12 0.00 5.82 0.00 0.00 0.00 31 E6b_E7a KnownJunction 0 24.08 12.37 124.74 56.04 20.46 120.67 24.42 162.08 51.30 245.73 54.59 11.85 25.81 120.67 121.02 59.64 53.86 156.94 74.83 69.35 153.45 40.11 55.14 32 ER6b ExonRegion 0 19.05 14.24 117.64 49.06 13.38 88.02 25.16 148.65 43.23 235.12 54.12 8.66 28.14 116.94 113.15 56.47 39.61 153.36 70.08 55.32 152.06 43.75 55.80 33 I6 Intron 0 7.80 5.95 16.03 4.60 4.80 7.27 5.00 20.19 6.78 28.25 14.42 5.94 2.87 22.31 28.52 22.18 9.04 17.70 9.63 8.44 8.95 8.07 6.93 34 I6_AR1 ActiveIntronRegion 0 1.95 5.65 6.86 4.20 10.49 4.55 1.75 11.23 3.04 12.71 7.50 5.80 0.00 16.11 26.69 18.78 8.91 20.18 10.00 4.00 10.18 4.04 4.23 35 I6_SR1 SilentIntronRegion 1 8.43 6.00 17.04 4.66 4.23 7.58 5.36 21.19 7.19 29.95 15.19 5.98 3.18 23.03 28.82 22.61 9.08 17.52 9.63 8.93 8.86 8.52 7.24 36 E7_Aa NovelBoundary 0 0.00 8.35 9.43 3.56 0.00 2.56 6.05 8.75 6.74 21.49 7.16 5.40 0.00 24.02 8.90 19.05 0.00 28.23 4.61 9.08 5.56 5.45 4.35 37 ER7a ExonRegion 0 19.07 29.29 130.80 44.52 18.57 54.43 19.39 169.26 40.25 222.27 75.14 14.88 24.20 134.22 137.14 61.87 54.48 153.77 45.00 76.74 115.67 47.96 58.98 38 E7a_E8a KnownJunction 0 34.52 22.89 148.22 42.09 34.89 44.97 26.63 165.61 36.08 194.78 83.60 26.86 19.80 153.98 113.60 79.21 70.78 133.02 62.59 57.97 155.12 68.52 68.12 39 ER8a ExonRegion 0 18.27 31.81 122.31 33.80 14.17 50.65 22.85 128.49 37.31 183.89 48.41 9.01 13.64 109.79 129.98 51.07 58.19 118.21 47.34 78.80 106.46 40.13 37.09 40 E8a_E9a KnownJunction 0 51.71 35.06 154.70 39.42 32.00 102.44 33.87 172.80 54.17 238.99 62.07 5.85 19.48 121.55 91.23 84.42 51.05 141.31 67.77 104.57 115.09 61.66 67.69 41 E9_Aa NovelBoundary 0 10.37 6.38 12.54 0.00 0.00 9.99 0.00 5.83 2.89 18.37 22.48 6.30 0.00 17.72 38.20 3.76 0.00 14.96 0.00 9.52 5.68 2.82 12.29 42 ER9a ExonRegion 0 26.50 30.09 114.50 32.56 33.92 73.51 24.96 147.61 39.84 186.46 47.51 17.28 14.75 132.41 166.54 56.09 45.56 122.30 51.18 88.49 106.55 48.26 47.69 43 E9_Da KnownBoundary 1 16.15 17.63 133.76 27.17 22.41 40.09 12.98 136.65 55.82 199.32 40.96 0.00 12.99 25.25 123.49 15.64 26.18 67.73 29.08 39.56 110.95 24.92 35.94 44 ER9b ExonRegion 1 14.09 15.36 120.80 23.31 9.65 39.14 12.12 101.30 35.75 160.05 48.98 9.11 11.11 60.09 144.83 26.75 31.45 44.93 33.87 48.71 94.88 28.18 34.62 45 E9b_E10a KnownJunction 0 36.52 29.60 164.69 46.75 13.75 64.22 24.25 133.61 44.85 189.30 79.97 18.46 13.64 103.48 148.09 54.34 46.56 86.89 75.11 86.16 102.12 49.42 37.99 46 ER10a ExonRegion 0 30.55 34.06 139.68 37.69 13.73 61.72 26.65 166.39 43.90 197.03 67.65 12.65 19.19 135.10 135.79 45.32 51.73 98.73 65.72 87.18 113.93 51.48 50.46 47 E10a_E11a KnownJunction 0 41.79 55.25 153.96 33.16 22.58 59.34 45.80 203.73 51.65 234.61 65.70 24.46 37.34 149.74 151.55 51.52 43.95 108.73 54.78 75.36 169.52 26.27 48.23 48 ER11a ExonRegion 0 39.02 42.71 146.77 43.20 24.29 74.25 27.24 188.58 44.70 224.09 72.82 24.77 29.15 133.47 150.68 78.18 54.97 92.18 73.30 72.44 123.43 60.16 58.02