Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM9B Gene 0 75.84 52.65 53.98 84.27 63.48 86.38 50.42 95.71 93.50 95.01 96.06 68.77 52.81 100.78 95.02 102.20 62.57 39.97 23.66 47.89 92.17 80.61 60.76 2 309134 Transcript 0 117.61 74.28 71.96 144.80 114.55 147.95 78.12 165.27 162.46 158.01 191.94 115.31 94.58 217.56 178.90 220.83 129.18 80.46 43.01 84.80 182.55 153.84 119.92 3 IG33 Intergenic 0 17.14 7.68 22.72 23.04 27.93 17.46 8.98 27.31 20.86 21.10 8.33 20.79 32.50 11.61 14.70 8.05 4.58 15.67 26.43 14.27 16.22 6.63 17.77 4 IG33_SR5 SilentIntergenicRegion 0 27.13 6.50 31.53 32.11 46.42 26.10 10.05 39.17 29.52 30.13 9.69 30.72 53.79 12.88 18.38 7.42 5.46 15.01 24.42 17.65 17.62 10.74 21.81 5 IG33_AR6 ActiveIntergenicRegion 0 31.69 14.96 46.61 45.32 48.42 26.63 13.12 58.20 43.05 41.65 16.75 48.54 97.05 17.04 15.34 10.26 6.01 18.81 53.45 19.93 19.28 10.52 31.68 6 IG33_SR4 SilentIntergenicRegion 0 14.71 4.99 16.27 16.82 27.65 17.29 7.98 19.11 15.58 14.53 4.46 19.72 33.62 11.14 12.63 5.97 3.02 9.14 22.89 11.85 13.20 6.32 16.64 7 IG33_AR5 ActiveIntergenicRegion 0 19.22 10.73 48.23 43.43 39.45 25.31 11.82 42.98 37.36 33.71 13.73 35.21 33.94 20.30 20.27 16.28 6.11 30.50 60.54 13.56 39.48 14.50 26.66 8 IG33_SR3 SilentIntergenicRegion 0 13.03 8.21 17.84 17.63 23.01 13.02 8.18 25.04 15.32 17.51 3.49 14.04 21.72 7.51 10.83 6.27 3.26 24.10 27.07 15.85 14.54 2.51 13.16 9 IG33_AR4 ActiveIntergenicRegion 0 10.64 7.23 16.26 15.53 23.10 17.81 12.39 31.85 24.12 18.75 12.49 14.38 26.05 14.25 10.83 13.75 5.75 15.87 37.31 14.44 20.19 13.23 21.42 10 IG33_AR3 ActiveIntergenicRegion 0 20.11 15.00 21.56 28.28 25.42 12.68 13.43 23.04 22.24 15.76 9.63 21.70 13.13 12.74 20.41 10.96 5.18 10.93 19.39 16.68 16.67 5.57 13.27 11 IG33_SR1 SilentIntergenicRegion 0 8.95 5.75 10.50 7.56 1.82 6.45 2.99 11.24 7.84 8.84 5.28 5.63 6.65 8.01 14.38 5.65 3.32 10.17 11.96 10.31 5.87 0.00 7.74 12 IG33_AR1 ActiveIntergenicRegion 0 5.80 3.56 13.06 11.84 6.57 12.70 5.75 13.60 10.45 17.93 12.27 3.21 2.05 11.51 14.17 9.50 6.57 17.66 19.72 9.36 17.11 4.45 17.20 13 ER1a ExonRegion 1 37.71 27.89 19.33 32.83 28.76 56.40 30.49 42.52 48.05 55.53 76.89 6.99 16.71 83.22 70.35 119.69 83.07 41.48 20.88 34.89 125.99 55.01 70.78 14 E1a_E2a KnownJunction 1 13.93 42.56 48.22 100.75 38.12 28.34 14.75 153.33 127.43 142.21 77.23 7.35 6.82 198.72 212.25 294.45 48.06 95.51 55.53 54.01 138.26 157.55 125.91 15 E1a_E3a NovelJunction 0 0.00 0.00 2.96 8.22 0.00 0.00 2.03 5.75 3.99 12.49 12.16 0.00 0.00 39.97 28.93 22.47 17.77 23.38 4.33 8.76 8.53 14.88 12.12 16 ER2a ExonRegion 0 34.65 42.42 54.28 104.62 94.79 93.92 45.82 149.81 131.74 133.80 142.97 75.30 65.25 171.33 126.24 224.56 85.07 84.35 40.47 59.46 142.59 154.59 141.60 17 E2a_E3a KnownJunction 0 87.05 52.95 59.78 127.59 247.96 195.17 89.69 151.89 133.36 144.76 206.58 127.09 140.58 241.16 140.18 145.00 151.19 62.35 26.26 76.51 191.63 124.61 92.96 18 ER3a ExonRegion 0 100.78 60.95 72.52 172.00 120.68 194.94 100.71 204.02 180.38 191.68 261.70 139.26 111.83 252.47 200.67 239.65 143.79 88.47 61.19 92.93 172.54 155.52 130.72 19 E3a_E4a KnownJunction 0 296.65 110.64 87.11 234.07 94.23 244.97 99.15 255.93 241.43 225.13 324.82 147.80 141.39 332.57 239.45 281.89 252.73 90.58 48.75 135.38 267.06 280.33 154.08 20 ER4a ExonRegion 0 213.49 110.48 106.77 202.88 149.96 183.12 99.34 207.80 238.43 218.59 302.19 233.05 210.70 311.19 232.55 260.36 169.84 109.09 59.91 130.05 262.76 177.27 140.78 21 E4a_E5a KnownJunction 0 205.22 169.38 146.18 256.64 203.31 263.71 178.37 242.30 285.82 233.22 277.44 245.03 122.07 306.44 316.09 363.58 192.05 128.46 58.73 143.81 287.82 217.44 185.66 22 I4 Intron 0 19.04 8.29 6.18 15.33 19.29 11.62 17.14 21.61 17.02 13.13 10.16 17.41 22.80 7.44 5.62 16.59 10.19 4.55 2.96 7.07 2.25 5.85 4.29 23 I4_AR1 ActiveIntronRegion 0 10.77 4.31 8.72 11.84 7.38 3.11 11.94 8.47 12.10 7.25 7.58 11.21 14.42 6.49 3.75 14.81 16.10 3.51 2.36 4.29 1.86 3.53 5.29 24 I4_AR3 ActiveIntronRegion 0 9.01 5.05 2.94 11.22 18.60 6.30 15.35 15.74 13.21 12.78 4.52 18.58 14.06 10.65 3.45 11.31 8.12 2.13 2.28 4.43 1.78 4.97 3.36 25 I4_SR2 SilentIntronRegion 0 13.21 8.17 5.09 9.32 18.05 4.30 11.66 21.89 14.78 17.25 11.29 16.13 15.88 5.49 5.07 17.14 11.38 2.45 2.17 11.25 1.75 6.39 2.00 26 I4_AR4 ActiveIntronRegion 0 15.92 6.92 4.99 16.06 18.25 13.96 23.67 26.83 20.74 14.23 13.16 22.18 36.99 7.37 7.24 16.03 12.31 3.23 3.37 8.70 1.33 8.54 4.83 27 I4_SR3 SilentIntronRegion 0 9.36 6.77 2.45 6.34 19.20 7.47 16.03 15.33 8.52 2.45 1.93 3.54 17.48 3.99 4.27 12.81 2.26 1.27 0.98 2.41 0.00 4.50 2.01 28 I4_AR6 ActiveIntronRegion 0 24.06 10.35 6.53 20.88 26.16 17.64 18.38 26.31 22.53 17.80 11.68 23.74 28.59 7.93 5.83 20.25 10.14 5.70 3.67 8.92 2.89 5.50 4.77 29 I4_SR4 SilentIntronRegion 0 39.72 17.35 13.76 26.99 30.25 17.45 20.26 43.49 24.57 19.26 16.68 11.68 15.92 9.63 7.45 23.10 9.81 9.99 4.58 10.99 3.94 6.36 3.65 30 I4_AR7 ActiveIntronRegion 0 47.92 17.47 6.49 19.13 26.77 11.25 23.22 23.16 15.73 11.56 14.99 14.14 15.93 8.69 10.17 22.78 10.85 8.00 3.39 7.03 5.49 6.86 7.18 31 E5_Aa NovelBoundary 0 40.30 20.65 14.96 24.21 18.85 38.44 27.25 21.65 15.94 19.45 16.11 18.76 0.00 7.24 5.19 39.22 4.02 10.86 3.76 2.94 9.14 13.84 0.00 32 ER5a ExonRegion 0 68.99 51.25 53.46 71.80 53.15 71.00 44.72 79.82 75.45 77.21 57.60 55.90 35.91 60.94 72.29 58.28 36.79 23.84 15.33 36.17 54.29 62.26 36.78