Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ILK Gene 0 297.56 137.13 343.44 238.16 195.54 319.49 144.71 347.12 169.39 413.66 528.39 140.87 150.07 441.06 525.43 413.32 414.11 263.34 177.36 185.75 857.14 480.86 332.93 2 299421 Transcript 1 21.23 11.43 11.96 10.32 24.36 52.52 18.30 16.53 7.03 20.65 46.53 0.00 0.39 47.98 55.23 66.24 42.59 13.31 14.98 12.74 65.90 51.01 46.04 3 420936 Transcript 1 161.44 63.34 92.10 40.32 81.75 403.69 131.60 96.15 46.90 149.41 179.89 0.00 0.00 120.31 88.76 169.70 92.47 185.88 114.26 94.41 428.24 217.99 219.55 4 396751 Transcript 0 4.46 1.09 12.15 2.65 4.93 9.14 5.26 10.49 6.21 8.79 24.32 2.33 4.83 13.89 13.68 15.87 26.81 13.68 9.88 6.13 42.83 11.52 15.86 5 IG36 Intergenic 0 21.69 10.68 1.37 0.51 7.36 26.14 13.24 3.22 2.30 8.55 23.19 2.55 1.93 26.23 26.11 34.92 33.01 6.23 15.13 10.64 13.77 10.94 24.96 6 IG36_AR1 ActiveIntergenicRegion 0 24.05 11.84 1.52 0.56 8.16 28.98 14.68 3.57 2.55 9.47 25.71 2.80 2.12 29.08 28.41 38.72 36.60 6.90 16.45 11.66 15.27 12.13 27.67 7 ER1a ExonRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 1 78.53 43.91 49.59 21.39 47.68 246.77 61.50 46.83 23.37 79.62 142.05 0.00 2.24 99.27 190.07 159.18 94.68 93.92 65.37 47.75 268.78 124.66 186.61 9 E1a_E2b KnownJunction 1 53.64 27.69 34.95 28.90 66.38 147.47 49.95 43.54 20.17 55.07 132.82 0.00 0.00 140.68 139.56 192.77 120.34 38.55 42.54 35.03 178.97 151.98 130.78 10 E1a_E2c KnownJunction 1 161.44 63.34 92.10 40.32 81.75 403.69 131.60 96.15 46.90 149.41 179.89 0.00 0.00 120.31 88.76 169.70 92.47 185.88 114.26 94.41 428.24 217.99 219.55 11 ER2a ExonRegion 0 4.46 1.09 12.15 2.65 4.93 9.14 5.26 10.49 6.21 8.79 24.32 2.33 4.83 13.89 13.68 15.87 26.81 13.68 9.88 6.13 42.83 11.52 15.86 12 E2_Ab KnownBoundary 0 10.74 9.60 18.33 5.13 8.23 14.31 6.40 16.96 4.20 7.63 4.69 6.30 0.00 14.42 10.75 3.42 31.23 13.18 0.00 2.81 31.63 9.12 7.94 13 ER2b ExonRegion 1 50.01 13.22 49.89 22.43 63.46 107.99 51.09 55.42 22.45 53.18 134.55 2.07 2.14 126.29 135.73 135.75 147.11 58.89 25.28 39.32 215.44 99.06 96.33 14 E2_Ac KnownBoundary 0 23.41 7.89 45.68 15.88 47.45 22.71 23.19 51.22 18.29 41.74 96.87 0.00 12.66 21.84 23.36 56.31 90.42 46.43 17.22 23.27 105.39 36.19 44.22 15 ER2c ExonRegion 0 41.67 21.31 115.22 59.19 25.18 92.88 24.93 106.83 49.05 161.59 269.00 31.02 36.40 189.72 220.69 145.12 217.27 99.96 75.17 85.06 485.01 134.76 131.16 16 E2a_E3a KnownJunction 0 10.30 22.10 179.53 88.70 15.62 61.90 12.76 183.31 77.72 241.19 368.46 69.62 58.28 313.73 480.50 328.89 242.73 145.87 69.46 159.54 576.38 277.02 317.64 17 I2 Intron 0 52.87 27.13 36.02 33.89 59.96 58.87 39.45 65.99 30.60 77.80 21.87 20.06 16.77 27.57 23.76 27.84 24.14 27.05 22.51 25.29 40.37 29.17 28.64 18 I2_AR3 ActiveIntronRegion 0 60.97 31.29 42.27 39.87 69.33 67.77 44.88 76.23 34.74 91.27 24.41 21.85 19.23 30.13 26.19 30.30 27.03 30.03 24.83 29.03 43.47 32.89 30.23 19 E3_Aa NovelBoundary 0 88.24 20.72 66.70 53.64 42.19 72.86 43.63 103.18 36.89 130.71 20.11 24.76 6.17 24.19 43.76 63.49 34.78 82.66 51.67 60.72 65.05 53.64 36.19 20 ER3a ExonRegion 0 96.40 87.44 220.68 135.74 148.08 311.47 112.20 237.62 100.36 317.09 351.88 87.55 58.40 334.24 362.80 282.64 276.10 220.43 120.81 164.91 670.83 321.75 241.51 21 E3_Da NovelBoundary 0 87.87 59.00 55.53 46.05 28.01 93.07 46.68 93.03 34.14 108.28 22.22 5.25 6.82 31.96 13.97 19.65 39.18 43.07 17.04 54.39 54.67 27.62 31.16 22 E3a_E4a KnownJunction 0 127.95 186.55 296.18 201.47 295.50 615.50 271.25 305.30 128.41 400.30 505.55 89.28 85.55 438.99 548.61 412.03 381.02 239.10 141.93 235.47 810.77 320.25 245.68 23 I3 Intron 0 81.85 25.64 31.72 26.19 39.74 35.46 30.79 65.68 20.63 76.16 24.92 14.84 8.89 17.88 25.87 23.32 31.45 44.29 24.99 27.43 37.66 20.43 24.69 24 I3_AR1 ActiveIntronRegion 0 82.76 25.92 32.07 26.48 40.18 35.84 31.13 66.41 20.85 76.98 25.19 15.01 8.99 18.05 26.16 23.58 31.80 44.78 25.27 27.72 38.08 20.66 24.96 25 E4_Aa NovelBoundary 0 131.50 49.46 50.83 49.98 48.98 101.25 44.30 127.86 44.76 145.54 30.69 6.15 20.45 40.20 38.57 48.45 51.80 57.95 43.11 56.57 65.30 30.07 18.95 26 ER4a ExonRegion 0 256.45 164.68 359.68 231.55 171.61 370.08 168.05 366.07 192.63 498.46 637.84 141.16 108.41 539.78 486.81 468.08 494.79 286.69 158.37 228.39 1104.77 524.74 345.94 27 E4_Da NovelBoundary 0 34.67 8.95 43.55 47.28 73.60 47.25 34.27 87.20 21.41 142.15 36.64 24.31 19.48 26.96 40.79 19.65 25.34 62.39 29.84 61.81 33.67 22.96 7.94 28 E4a_E5a KnownJunction 1 333.76 133.00 371.90 242.36 164.43 242.76 100.43 308.22 213.51 499.34 643.32 185.76 74.02 503.33 394.83 394.60 489.01 258.01 133.93 161.26 1062.08 517.18 308.16 29 I4 Intron 0 29.10 18.81 30.14 22.85 40.14 48.14 28.80 61.82 15.18 67.94 24.64 9.10 4.83 25.25 21.08 23.78 18.98 44.32 37.43 29.26 29.19 16.67 14.68 30 I4_AR1 ActiveIntronRegion 0 29.36 19.00 30.42 23.07 40.53 48.60 29.07 62.40 15.33 68.60 24.89 9.19 4.88 25.50 21.29 24.00 19.14 44.75 37.80 29.54 29.47 16.82 14.83 31 E5_Aa NovelBoundary 0 59.42 11.84 49.38 24.11 70.71 60.25 40.81 145.44 23.58 114.57 32.06 31.06 12.34 37.97 10.88 19.74 22.07 57.50 33.04 43.14 23.41 13.59 21.34 32 ER5a ExonRegion 0 282.50 141.85 413.08 263.54 203.08 314.83 125.59 386.46 218.93 482.20 629.11 179.52 111.74 507.21 455.20 430.31 490.71 325.38 227.28 206.43 1029.47 510.98 341.17 33 E5a_E6a KnownJunction 0 302.13 136.36 493.33 317.11 243.38 374.67 145.65 392.17 236.89 466.14 598.05 181.41 148.53 509.57 491.87 575.32 519.40 323.83 247.35 173.47 1091.42 641.85 325.66 34 E6_Aa NovelBoundary 0 101.43 26.64 34.53 35.53 69.02 116.98 70.57 67.48 38.48 83.14 27.27 18.61 8.28 21.01 8.90 11.79 17.02 33.41 35.58 30.94 30.77 13.53 53.95 35 ER6a ExonRegion 0 272.83 152.01 415.59 270.81 284.43 396.78 171.80 390.80 200.02 476.62 634.24 176.01 159.13 612.66 523.16 533.92 516.28 383.87 195.44 194.45 1086.25 612.13 404.31 36 E6_Da NovelBoundary 0 56.23 34.73 56.62 53.47 43.21 82.06 40.14 103.38 63.40 94.63 9.84 11.70 6.82 44.62 23.86 63.06 22.07 59.40 44.24 31.51 64.80 28.72 38.84 37 E6a_E7a KnownJunction 0 375.40 250.88 381.00 265.00 259.68 411.35 206.37 341.53 172.19 475.40 583.78 204.37 126.29 578.67 592.50 387.93 457.78 272.85 230.22 181.59 1052.07 626.72 377.82 38 I6 Intron 0 40.87 21.15 26.22 20.11 33.12 49.94 19.01 49.74 28.25 48.25 22.97 10.97 4.23 26.63 18.84 30.90 21.25 26.87 37.85 20.02 40.37 18.57 20.36 39 I6_AR1 ActiveIntronRegion 0 41.66 21.56 26.72 20.50 33.78 50.93 19.39 50.69 28.80 49.17 23.37 11.19 4.32 27.14 19.22 31.52 21.64 27.37 38.57 20.41 41.15 18.94 20.76 40 E7_Aa NovelBoundary 0 103.06 44.33 52.84 45.95 42.36 65.53 44.16 119.81 75.95 150.13 17.58 5.40 20.45 28.49 13.35 19.82 15.90 34.82 55.34 29.53 77.72 28.23 26.72 41 ER7a ExonRegion 0 286.10 191.11 401.12 243.81 230.30 392.03 188.34 360.08 170.37 466.27 627.23 180.03 125.49 578.49 516.66 519.29 545.61 314.72 219.49 192.80 1058.14 642.79 398.36 42 E7_Da NovelBoundary 0 297.53 79.59 106.47 106.51 184.21 162.80 85.45 232.11 112.47 189.48 61.17 11.85 27.76 31.49 31.89 115.70 53.02 86.35 66.17 55.54 137.08 87.07 96.97 43 E7a_E8a KnownJunction 0 321.02 159.38 429.32 251.12 222.24 430.55 238.21 414.77 189.00 481.77 551.72 124.84 148.53 532.70 635.15 521.49 553.90 295.19 171.77 188.11 1074.80 610.93 418.62 44 I7 Intron 0 107.94 28.48 24.92 26.26 55.74 55.97 27.10 48.12 16.53 47.27 15.27 29.91 8.12 27.90 25.19 22.42 21.34 13.55 38.94 20.63 46.70 26.94 15.82 45 I7_AR1 ActiveIntronRegion 0 109.45 28.89 25.26 26.61 56.53 56.73 27.47 48.79 16.76 47.92 15.49 30.34 8.24 28.27 25.49 22.72 21.64 13.74 39.50 20.93 47.35 27.28 16.05 46 E8_Aa NovelBoundary 0 86.98 45.19 58.93 59.73 95.16 160.08 26.50 113.41 38.74 86.31 24.32 12.60 32.63 40.79 32.51 32.38 17.39 50.45 20.14 30.81 85.93 44.70 22.88 47 ER8a ExonRegion 0 316.48 208.57 450.17 308.56 289.32 482.11 225.43 473.34 213.33 555.94 676.04 157.04 178.82 620.50 679.10 639.66 576.76 419.54 228.74 244.58 1151.28 742.13 537.11 48 E8a_E9a KnownJunction 0 388.81 213.65 566.33 468.87 374.11 507.38 241.22 560.87 277.14 670.37 720.87 237.23 146.42 705.70 826.01 813.97 680.88 583.91 346.36 312.30 1153.69 1448.17 709.71 49 ER9a ExonRegion 0 333.19 159.70 513.43 369.67 268.45 457.60 203.34 551.63 281.42 640.81 827.95 206.29 235.64 678.67 761.87 636.13 657.70 469.83 258.89 283.31 1293.08 817.16 535.55 50 E9a_E10a KnownJunction 0 454.08 235.94 549.48 324.43 299.15 410.73 259.85 513.63 259.60 635.71 849.27 184.56 218.17 705.52 857.41 610.61 630.48 405.83 229.18 252.47 1203.42 746.62 497.07 51 ER10a ExonRegion 0 563.15 211.16 597.53 422.19 281.46 487.14 268.33 581.60 304.72 676.46 850.90 220.02 273.75 685.06 808.28 652.06 640.05 471.15 264.88 316.92 1295.11 839.20 593.92 52 E10a_E11a KnownJunction 0 854.30 281.66 512.02 342.35 534.89 625.09 335.81 475.23 242.94 575.73 718.29 223.57 388.12 717.47 831.70 501.83 612.25 293.53 278.22 267.69 1246.42 640.69 449.35 53 ER11a ExonRegion 0 864.51 254.06 533.89 367.35 375.49 525.90 252.16 538.43 244.96 610.13 911.30 275.87 353.16 699.49 829.41 612.79 640.84 353.57 292.13 293.96 1308.72 667.29 511.50 54 E11a_E12a KnownJunction 0 1200.66 325.60 613.40 391.96 335.74 528.56 260.16 609.09 268.17 630.10 753.66 268.44 270.60 674.09 802.65 671.53 570.36 308.58 245.09 285.52 1188.29 508.73 535.14 55 ER12a ExonRegion 0 568.50 267.90 568.50 435.99 357.81 489.50 236.18 595.26 287.49 658.14 790.22 255.70 345.24 699.98 857.44 572.74 640.95 336.11 274.91 294.12 1274.20 682.36 457.76 56 E12_Da NovelBoundary 1 29.26 14.27 42.99 15.52 64.77 57.18 27.60 59.60 15.34 107.42 17.48 81.78 0.00 23.54 9.15 11.28 14.31 56.29 52.14 36.18 8.09 14.57 14.85 57 E12a_E13a KnownJunction 0 326.50 219.37 560.48 505.66 366.30 419.25 211.45 586.00 280.93 628.09 757.51 263.04 307.45 695.87 1002.54 734.51 586.72 366.86 252.62 289.61 1215.96 720.41 491.26 58 I12 Intron 1 10.03 13.60 19.85 15.28 36.54 37.82 24.72 50.97 11.80 61.44 16.70 28.74 2.15 14.32 11.46 14.08 13.80 32.51 40.84 23.72 17.17 13.36 8.18 59 I12_AR1 ActiveIntronRegion 1 10.14 13.74 20.07 15.45 36.94 38.23 24.99 51.53 11.93 62.10 16.88 29.06 2.18 14.47 11.59 14.24 13.95 32.86 41.27 23.97 17.36 13.50 8.27 60 ER13a ExonRegion 0 390.68 159.12 413.26 309.76 225.03 313.51 149.80 423.45 202.53 484.26 575.36 173.70 187.31 452.93 722.12 481.46 433.56 253.58 217.67 201.86 898.12 551.61 345.68 61 ER13b ExonRegion 0 7.94 6.61 0.92 2.04 6.69 10.09 4.96 6.05 0.93 6.88 6.77 0.00 1.17 3.25 26.11 5.94 7.43 1.39 2.39 3.19 18.73 1.04 7.34