Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SMPD1 Gene 0 65.94 21.05 64.69 45.03 46.38 56.20 29.17 107.81 49.68 170.15 24.04 28.35 39.10 47.36 73.77 44.78 46.10 56.03 26.01 40.70 367.68 146.38 145.52 2 342245 Transcript 0 147.86 41.37 85.65 69.90 110.39 109.64 85.17 148.03 68.23 235.65 44.42 43.80 59.05 79.65 133.91 79.39 85.48 86.46 49.06 70.30 565.68 308.90 334.70 3 299397 Transcript 0 6.92 3.52 8.51 4.05 15.11 11.30 2.61 11.82 2.90 23.99 0.05 1.17 14.70 2.85 12.94 0.16 11.24 5.34 0.00 6.56 23.76 12.95 18.02 4 356761 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 9.49 3.96 20.95 11.72 20.67 38.06 17.11 42.88 25.65 86.30 14.97 19.61 23.14 33.06 39.14 23.06 29.57 30.89 12.18 21.65 246.31 73.77 65.98 6 E1a_E2a KnownJunction 1 13.63 6.38 71.91 51.14 18.25 15.84 6.27 113.32 75.17 193.33 26.06 112.69 149.99 55.39 26.82 49.82 53.95 107.28 38.31 79.26 475.56 169.68 172.18 7 ER2a ExonRegion 0 29.99 16.55 49.62 40.93 27.65 48.93 19.93 105.17 52.23 175.13 23.89 30.92 38.96 50.82 71.91 48.57 50.21 62.50 27.28 42.46 409.11 142.29 160.83 8 E2_Da KnownBoundary 0 16.08 5.85 18.45 12.02 26.74 19.42 6.62 17.58 7.20 44.38 0.00 0.00 5.84 7.24 19.28 3.93 16.46 12.93 0.00 11.12 32.19 11.45 15.28 9 E2a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E2a_E3a KnownJunction 0 70.75 36.77 86.69 96.89 74.02 124.08 79.76 139.16 68.60 260.18 37.64 38.26 46.43 102.30 175.29 86.73 89.29 103.63 54.68 76.13 521.77 371.14 390.71 11 ER2b ExonRegion 0 6.92 3.52 8.51 4.05 15.11 11.30 2.61 11.82 2.90 23.99 0.05 1.17 14.70 2.85 12.94 0.16 11.24 5.34 0.00 6.56 23.76 12.95 18.02 12 E2_Db NovelBoundary 0 10.82 5.85 8.84 7.13 16.55 30.89 6.32 30.48 8.77 29.01 5.16 0.00 5.84 4.59 0.00 38.54 9.35 4.89 4.52 3.26 8.53 21.92 31.67 13 E2b_E4a KnownJunction 0 0.00 0.00 1.83 2.06 7.98 5.00 0.00 8.46 0.00 6.45 0.00 0.00 6.82 0.00 4.45 0.00 0.00 1.95 0.00 0.00 11.43 11.51 15.79 14 ER2c ExonRegion 0 7.06 2.03 2.45 1.36 13.38 3.67 0.88 8.64 1.24 16.44 3.22 0.00 7.82 1.62 7.74 0.00 5.50 1.85 0.00 4.96 11.75 12.50 17.62 15 Ix Intron 0 29.84 7.48 6.94 11.45 23.29 16.41 12.01 34.42 9.25 24.52 1.66 5.56 10.79 8.81 5.82 9.11 4.86 6.54 3.91 7.83 11.07 8.94 10.80 16 Ix_AR1 ActiveIntronRegion 0 29.91 7.50 6.95 11.48 23.35 16.45 12.04 34.50 9.27 24.57 1.66 5.57 10.82 8.83 5.83 9.13 4.87 6.55 3.91 7.84 11.10 8.96 10.83 17 E3_Aa NovelBoundary 0 46.75 18.48 7.69 32.00 47.54 35.89 10.78 51.47 13.51 39.62 2.11 12.15 6.66 2.30 4.45 25.04 0.00 10.53 0.00 5.37 26.32 5.76 16.48 18 ER3a ExonRegion 0 124.70 27.69 67.55 58.69 80.15 85.24 60.36 118.50 57.22 197.31 34.14 36.27 58.16 57.30 83.16 48.66 67.02 67.20 30.95 56.27 485.89 214.99 206.62 19 E3a_E4a KnownJunction 0 248.12 59.66 102.72 54.11 177.00 119.59 115.40 186.44 78.85 249.47 61.49 56.87 72.56 79.35 143.27 102.79 100.14 88.54 61.55 78.49 689.37 340.58 406.76 20 Ix Intron 0 21.68 11.32 10.57 13.12 21.45 4.90 9.73 26.96 6.97 15.23 0.86 0.79 0.86 1.79 3.31 2.65 2.94 3.07 7.80 7.58 4.91 3.25 6.54 21 Ix_AR1 ActiveIntronRegion 0 21.87 11.41 10.67 13.23 21.64 4.94 9.82 27.20 7.03 15.36 0.87 0.80 0.87 1.80 3.34 2.67 2.97 3.09 7.87 7.65 4.95 3.28 6.60 22 E4_Aa NovelBoundary 0 44.97 12.63 23.18 18.61 18.34 26.58 15.15 48.26 12.56 45.42 2.68 0.00 6.33 2.71 4.45 16.15 0.00 12.19 0.00 5.37 0.00 0.00 7.85 23 ER4a ExonRegion 0 192.93 47.17 93.11 70.04 127.64 94.95 62.60 179.09 70.67 260.42 54.70 65.95 91.30 79.94 84.89 94.53 85.27 82.93 45.79 62.67 606.54 252.24 291.38 24 E4_Da NovelBoundary 0 34.60 12.43 19.87 27.80 23.43 2.90 24.42 34.34 8.25 39.70 0.00 0.00 6.82 4.83 0.00 0.00 0.00 15.05 9.60 8.95 2.72 2.51 11.78 25 E4a_E5a KnownJunction 1 150.55 62.82 106.71 82.64 69.35 70.36 63.15 172.18 82.75 274.26 26.43 106.38 107.30 86.23 69.60 101.77 59.19 72.67 15.81 54.01 500.64 239.24 212.21 26 Ix Intron 0 23.51 7.70 8.76 8.72 10.81 9.26 7.69 13.66 5.58 22.44 0.00 0.00 0.98 2.46 2.28 3.00 0.83 4.88 6.43 6.45 3.34 4.73 8.90 27 Ix_SR1 SilentIntronRegion 0 22.41 9.28 8.91 9.76 6.10 10.17 8.66 16.47 7.71 28.40 0.00 0.00 0.91 1.64 2.39 4.61 1.48 5.75 7.63 7.86 4.23 4.84 7.68 28 Ix_AR2 ActiveIntronRegion 0 27.84 6.34 9.66 8.16 18.90 9.12 7.18 11.04 3.09 16.12 0.00 0.00 1.20 3.96 2.42 1.03 0.00 4.12 5.43 5.21 2.46 4.94 11.78 29 E5_Aa NovelBoundary 0 44.23 0.00 21.47 16.38 4.24 10.16 6.27 19.92 8.62 21.19 0.00 0.00 0.00 5.47 8.90 0.00 4.58 12.02 0.00 2.43 24.09 17.21 7.85 30 ER5a ExonRegion 0 128.82 38.86 117.12 85.28 85.06 97.46 50.17 181.20 78.73 269.53 42.03 53.82 72.66 62.64 104.70 71.39 66.24 79.96 30.74 67.60 538.54 258.81 249.53 31 E5_Da NovelBoundary 0 80.90 2.50 28.38 23.64 29.46 22.54 24.64 45.59 21.21 64.93 5.26 0.00 13.64 12.07 15.70 7.01 9.07 20.23 0.00 14.51 19.77 20.15 8.45 32 E5a_E6a KnownJunction 1 76.98 11.91 74.45 53.67 40.41 89.66 50.39 135.42 52.84 215.49 22.58 36.16 114.93 68.28 81.96 88.69 35.25 85.85 22.31 47.62 442.39 194.36 246.70 33 Ix Intron 0 62.27 7.98 8.95 5.98 20.99 21.58 10.39 24.42 10.83 36.32 0.00 1.17 3.79 5.56 9.43 8.74 9.71 10.51 4.17 9.74 13.69 9.54 12.48 34 Ix_AR1 ActiveIntronRegion 0 63.08 8.08 9.07 6.05 21.27 21.80 10.52 24.73 10.97 36.78 0.00 1.18 3.84 5.63 9.55 8.86 9.82 10.64 4.22 9.85 13.87 9.66 12.62 35 E6_Aa NovelBoundary 0 81.57 6.38 37.88 25.47 16.13 37.93 15.59 57.01 27.43 72.34 6.95 6.30 6.82 10.01 24.11 18.71 13.09 19.15 0.00 9.78 44.85 11.08 31.33 36 ER6a ExonRegion 0 102.10 29.62 96.14 58.88 59.76 59.15 33.10 132.60 55.40 191.64 22.53 22.62 35.05 46.98 91.25 46.24 42.11 58.44 30.78 42.07 339.88 156.22 139.84