Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SIRT3 Gene 0 48.42 36.16 56.50 64.46 22.54 55.55 18.73 89.63 34.62 81.90 37.86 15.16 19.43 54.32 59.60 47.93 44.57 56.86 38.89 42.73 58.40 36.61 39.37 2 382743 Transcript 0 48.85 32.35 57.94 50.28 21.21 49.89 16.15 79.62 33.18 81.48 43.38 12.41 15.62 63.78 61.98 47.95 49.15 59.66 37.89 43.22 67.07 33.61 40.05 3 324945 Transcript 0 0.00 3.00 2.19 0.27 0.00 1.60 1.50 0.59 0.00 0.42 0.26 0.09 0.00 3.69 0.00 0.06 0.28 3.73 0.85 1.12 2.13 0.04 1.32 4 ER1a ExonRegion 0 0.09 0.00 0.61 0.00 0.00 0.00 0.00 0.42 0.00 0.00 0.99 0.00 0.00 0.00 0.41 0.81 0.00 0.00 0.00 0.00 0.79 0.00 0.08 5 E1_Ab KnownBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 1.93 0.00 0.00 2.63 0.00 0.00 0.00 0.00 3.50 0.00 0.00 0.00 0.00 2.66 0.00 0.00 6 ER1b ExonRegion 0 10.57 6.39 7.35 3.98 1.62 22.14 5.63 1.92 3.34 9.33 11.54 0.93 0.00 12.41 19.43 6.19 11.65 2.82 7.17 6.51 21.97 3.45 16.47 7 E1_Da KnownBoundary 0 7.11 12.76 4.73 7.06 0.00 5.11 0.00 15.65 7.61 7.41 6.90 5.55 0.00 2.47 8.90 3.67 12.81 6.88 4.80 8.82 27.00 3.12 7.26 8 E1a_E2a NovelJunction 0 0.00 0.00 3.25 0.00 0.00 0.00 2.21 3.70 3.44 6.61 2.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.43 17.67 0.00 0.00 9 E1a_E5a KnownJunction 0 0.00 0.00 5.38 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 10 ER1c ExonRegion 0 4.97 5.01 12.82 6.18 0.93 3.32 0.80 17.11 5.47 23.54 21.14 1.78 5.04 35.49 31.89 22.17 14.63 20.69 17.87 23.48 28.59 14.64 23.86 11 E1_Db NovelBoundary 0 12.97 36.31 12.71 14.85 7.89 7.84 14.49 27.97 13.89 20.36 13.06 0.00 19.48 14.36 8.90 8.72 20.29 23.42 12.33 33.11 26.63 8.57 10.59 12 E1b_E2a KnownJunction 0 0.00 6.45 11.86 5.13 4.33 14.93 4.11 17.70 6.66 27.96 26.69 6.30 8.28 30.90 9.77 11.19 32.73 27.03 23.25 11.82 23.41 5.14 21.00 13 I1 Intron 0 31.94 25.86 18.64 28.28 22.04 27.67 14.41 38.87 14.09 36.50 14.19 20.03 13.16 18.66 18.19 21.16 18.63 19.45 19.68 21.34 21.11 24.07 21.56 14 I1_AR1 ActiveIntronRegion 0 5.00 29.53 11.71 11.64 3.61 8.62 10.63 15.65 7.39 13.22 9.01 9.89 9.32 13.55 12.26 8.03 8.92 16.70 6.46 19.33 18.56 8.44 4.96 15 I1_SR2 SilentIntronRegion 0 14.50 18.83 16.22 20.35 19.00 21.17 11.76 22.87 11.44 27.32 9.07 15.58 14.14 16.54 18.10 18.85 10.07 16.67 16.16 16.74 15.66 17.18 18.26 16 I1_AR3 ActiveIntronRegion 0 51.27 29.99 22.28 38.33 29.12 37.34 17.32 56.29 17.77 49.21 19.17 25.91 13.56 21.62 19.92 26.35 27.24 22.25 25.72 25.21 25.72 33.10 28.36 17 E2_Aa NovelBoundary 0 86.24 30.98 24.57 47.45 49.83 46.17 22.57 52.16 20.92 38.84 17.16 0.00 20.45 19.25 25.96 22.39 39.08 38.59 12.71 14.89 44.67 29.21 16.05 18 ER2a ExonRegion 0 42.64 21.71 43.05 52.56 20.88 50.03 16.17 88.21 29.17 82.96 57.41 27.17 14.63 68.85 68.68 51.53 46.08 70.11 54.42 52.43 81.76 39.09 53.07 19 E2a_E3a KnownJunction 0 41.64 14.21 66.76 42.62 15.45 50.99 11.08 111.93 42.51 86.93 61.59 6.60 6.49 70.52 30.90 46.40 34.60 71.42 23.25 50.88 71.17 40.54 25.27 20 E3_Aa NovelBoundary 0 3.26 0.00 3.40 4.83 4.33 0.00 0.00 2.55 3.15 12.65 2.68 0.00 6.33 0.00 0.00 8.29 0.00 4.68 0.00 5.82 11.80 2.82 16.13 21 ER3a ExonRegion 0 78.02 37.17 66.51 60.19 26.39 68.25 25.82 102.36 41.26 109.76 57.70 13.14 20.79 81.18 80.56 61.97 67.08 70.38 49.50 64.16 83.34 43.09 53.25 22 E3a_E4a KnownJunction 0 63.86 24.01 73.09 41.22 14.60 30.04 15.06 65.51 38.05 101.59 40.59 0.00 20.13 71.63 74.91 39.14 50.30 46.30 59.01 67.69 58.87 30.19 19.55 23 E4_Aa NovelBoundary 0 17.78 3.35 8.46 21.61 7.13 26.29 8.26 27.56 6.28 21.33 7.26 0.00 0.00 8.48 23.36 0.00 4.02 12.56 0.00 6.52 20.20 8.14 7.00 24 ER4a ExonRegion 0 63.71 30.26 84.84 49.58 22.49 54.83 18.02 86.23 41.79 100.68 48.61 17.49 23.87 92.72 71.90 46.76 78.57 65.64 41.95 57.15 92.45 47.41 62.66 25 E4a_E5a KnownJunction 0 63.12 44.99 92.72 43.98 39.05 66.38 33.52 72.45 42.30 95.52 37.22 12.45 20.13 72.69 99.39 57.68 57.50 84.73 33.79 37.58 99.83 39.31 58.22 26 ER5a ExonRegion 0 46.92 40.35 75.81 50.01 20.91 57.71 26.38 97.55 36.52 102.34 43.13 18.15 9.32 81.68 77.49 74.93 71.30 70.76 25.86 49.62 97.47 29.77 49.92 27 E5a_E7a KnownJunction 0 72.53 63.94 84.62 74.98 23.94 66.44 13.65 130.53 39.29 98.56 51.59 18.91 20.13 72.64 52.66 81.52 78.07 79.51 20.89 43.46 89.58 31.41 49.43 28 E5b_E6a KnownJunction 0 0.00 6.71 0.00 0.00 0.00 2.90 1.77 0.00 0.00 0.00 0.00 0.00 0.00 4.89 0.00 0.00 0.00 4.31 0.00 0.00 0.00 0.00 0.00 29 ER5b ExonRegion 0 0.00 4.07 2.55 0.00 0.00 2.14 2.98 1.15 0.00 0.67 0.00 0.36 0.00 5.28 0.00 0.25 1.10 4.00 0.00 2.13 1.47 0.17 5.14 30 ER6a ExonRegion 0 0.00 1.23 0.82 1.08 0.00 1.38 1.24 1.22 0.00 0.00 1.03 0.00 0.00 4.58 0.00 0.00 0.00 6.62 3.38 2.37 4.50 0.00 0.12 31 E7_Aa NovelBoundary 0 27.56 6.25 10.50 5.19 8.06 11.47 1.85 14.21 4.75 1.53 0.00 0.00 0.00 2.35 10.38 4.36 0.00 13.60 0.00 14.06 3.15 7.78 0.00 32 ER7a ExonRegion 0 70.59 50.36 70.46 71.17 22.17 61.89 18.06 100.79 44.52 105.68 53.04 19.98 15.63 85.14 88.75 74.57 66.85 74.88 38.12 50.95 89.20 37.39 60.15 33 E7_Da NovelBoundary 0 22.89 0.00 20.19 12.02 3.14 12.15 5.17 16.27 18.26 11.74 11.69 0.00 0.00 24.84 41.41 20.42 30.76 29.22 14.40 0.00 16.25 2.69 13.83 34 E7a_E8a KnownJunction 0 78.01 74.39 77.14 113.94 54.92 110.85 30.38 125.03 56.34 129.96 69.49 19.66 19.64 96.83 132.89 77.50 68.16 99.36 82.73 55.54 99.28 61.91 55.74 35 E8_Aa NovelBoundary 0 30.15 5.53 7.75 2.86 4.33 5.05 3.44 17.70 0.00 5.80 2.21 17.86 0.00 4.71 9.15 13.93 3.93 2.57 0.00 0.00 2.35 2.57 4.35 36 ER8a ExonRegion 0 55.82 48.00 68.77 92.13 30.63 70.62 23.23 116.84 43.95 96.13 37.80 17.85 28.27 50.55 63.07 52.13 44.44 65.51 47.79 46.66 53.64 46.80 38.40