Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	ARFIP2	Gene	0	90.28	68.50	136.07	97.30	71.66	97.32	66.42	137.32	45.94	276.28	103.64	61.06	39.59	127.23	202.26	166.63	121.33	116.88	87.55	90.23	154.27	117.84	101.15
2	396777	Transcript	0	1.23	0.00	0.00	0.51	0.00	5.81	0.77	0.00	2.56	2.74	0.03	4.69	0.00	2.71	0.00	2.11	0.00	1.21	0.00	0.53	2.23	1.71	0.08
3	254584	Transcript	0	7.08	9.64	10.22	6.79	9.22	10.29	6.95	17.64	6.36	17.93	2.33	6.11	8.92	7.89	8.66	7.33	4.33	8.13	4.97	11.52	8.71	6.89	9.10
4	423813	Transcript	0	0.00	0.00	1.09	0.00	0.00	2.16	0.00	1.52	0.00	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	445086	Transcript	0	0.00	0.00	1.42	0.00	0.00	0.00	0.00	2.55	0.00	0.00	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	1.23	0.00	0.00	0.51	0.00	5.81	0.77	0.00	2.56	2.74	0.03	4.69	0.00	2.71	0.00	2.11	0.00	1.21	0.00	0.53	2.23	1.71	0.08
7	E1_Ab	KnownBoundary	0	3.04	3.16	0.00	1.90	0.00	5.05	1.81	0.00	4.66	3.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.81	0.00	3.07	5.62	5.94	0.00
8	ER1b	ExonRegion	0	29.98	16.68	3.77	6.01	17.10	51.96	29.13	4.96	3.20	17.01	17.00	0.00	0.00	24.00	37.82	43.59	28.49	7.60	10.50	9.14	51.22	17.29	35.46
9	E1_Ac	KnownBoundary	0	143.51	86.89	23.86	25.67	79.03	243.16	130.46	29.08	18.72	85.82	53.33	0.00	0.00	89.88	128.07	169.10	115.01	66.37	47.06	24.22	175.82	47.95	142.04
10	ER1c	ExonRegion	1	109.74	68.91	21.31	11.79	55.05	193.86	106.76	9.83	5.64	71.34	59.27	2.27	4.28	135.43	143.25	139.58	115.24	27.74	76.89	46.60	122.11	86.57	120.73
11	E1a_E2a	KnownJunction	0	0.00	8.02	12.39	5.79	0.00	5.39	5.30	6.65	5.93	28.93	2.68	0.00	13.64	9.95	8.90	3.93	9.16	5.76	7.72	16.75	2.72	0.00	7.34
12	E1a_E2b	KnownJunction	0	6.52	5.99	5.00	0.00	0.00	6.87	4.11	2.34	1.36	11.01	0.00	5.55	8.28	9.65	5.44	7.43	0.00	2.40	0.00	3.07	7.85	5.51	3.93
13	ER2a	ExonRegion	1	7.49	12.35	20.32	8.44	8.42	20.75	16.05	9.99	8.83	36.42	18.57	13.20	27.45	25.95	27.24	9.28	44.04	25.73	22.53	20.65	37.03	13.67	20.06
14	E2_Ab	KnownBoundary	1	20.00	30.92	34.48	21.61	16.38	42.93	28.09	23.37	15.28	59.42	36.22	52.07	33.44	31.31	54.76	19.40	72.65	47.01	45.08	26.46	76.42	37.05	33.12
15	ER2b	ExonRegion	0	25.57	23.73	65.46	56.48	10.94	20.52	18.07	77.47	22.55	193.40	105.77	39.35	25.94	106.87	145.06	77.04	140.92	66.67	73.61	78.72	166.75	83.69	73.65
16	E2_Da	NovelBoundary	0	20.08	11.58	19.75	10.29	12.22	0.00	10.51	30.03	8.30	34.95	26.22	18.61	6.82	35.67	35.23	45.63	16.74	14.30	21.74	8.95	25.27	62.52	31.58
17	E2a_E3a	KnownJunction	1	21.86	45.65	124.42	82.21	8.15	31.86	10.60	152.63	35.62	309.10	119.61	11.25	13.31	213.08	237.84	158.51	126.60	138.62	148.33	107.89	132.02	130.86	134.02
18	I2	Intron	0	39.95	3.27	17.97	10.60	9.13	11.41	8.24	19.14	7.39	24.36	36.87	26.69	17.12	24.30	21.49	34.02	29.16	13.65	14.71	11.53	36.27	39.32	25.94
19	I2_AR1	ActiveIntronRegion	0	40.26	3.29	18.10	10.69	9.21	11.50	8.31	19.28	7.45	24.55	37.16	26.90	17.25	24.50	21.66	34.29	29.39	13.76	14.83	11.63	36.55	39.64	26.15
20	E3_Aa	NovelBoundary	1	41.27	0.00	14.28	5.99	37.78	10.62	5.96	18.85	7.15	26.08	12.11	75.62	46.59	27.19	20.89	47.00	21.79	7.75	13.84	17.83	29.04	19.10	32.61
21	ER3a	ExonRegion	0	37.87	33.42	131.52	88.95	52.95	55.95	31.04	138.34	49.78	299.90	117.47	56.00	47.46	193.04	261.95	197.96	143.89	194.21	146.82	123.26	181.75	141.79	139.65
22	E3_Da	NovelBoundary	0	30.60	32.36	112.47	82.37	79.37	85.24	33.48	123.22	51.45	257.53	115.40	62.57	94.31	79.05	183.20	132.27	171.48	162.33	98.54	73.25	148.76	103.91	118.40
23	E3a_E4b	KnownJunction	0	0.00	0.00	1.09	0.00	0.00	2.16	0.00	1.52	0.00	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E3_Db	NovelBoundary	1	47.79	22.30	29.21	21.74	38.37	25.27	19.17	35.90	6.63	50.85	11.95	57.62	26.78	21.66	59.95	58.36	8.70	38.01	33.70	25.44	23.23	79.24	51.64
25	E3b_E4a	KnownJunction	1	31.86	67.88	114.37	108.31	118.93	201.19	60.72	109.83	44.42	244.85	134.51	37.96	6.82	111.25	201.25	113.73	143.15	121.00	73.32	116.71	116.76	83.89	92.88
26	E3b_E5a	KnownJunction	0	0.00	0.00	1.42	0.00	0.00	0.00	0.00	2.55	0.00	0.00	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER3b	ExonRegion	0	29.43	52.00	107.95	95.34	87.66	144.43	47.41	110.04	47.29	252.26	138.34	45.56	41.99	105.34	183.33	124.26	156.09	150.28	91.31	101.42	140.41	87.41	110.61
28	I3	Intron	0	57.83	29.67	24.95	31.96	33.30	37.39	22.07	60.80	20.27	111.25	46.59	57.41	52.22	43.07	43.93	72.49	46.51	46.51	40.78	24.05	66.03	62.75	57.76
29	I3_AR1	ActiveIntronRegion	0	57.99	29.76	25.02	32.05	33.39	37.49	22.13	60.97	20.33	111.56	46.72	57.57	52.36	43.18	44.05	72.70	46.64	46.64	40.90	24.11	66.22	62.92	57.92
30	E4_Aa	NovelBoundary	0	63.12	63.15	19.25	20.84	15.70	30.61	7.20	51.88	8.91	63.66	24.32	12.60	33.93	53.39	10.63	51.44	31.04	18.03	7.06	20.52	37.44	51.19	26.89
31	ER4a	ExonRegion	1	57.05	63.22	173.28	105.12	90.16	180.99	126.44	153.49	42.45	307.82	126.52	116.90	28.34	168.63	231.60	147.44	142.94	120.18	107.96	148.57	200.87	120.35	102.02
32	E4_Ab	KnownBoundary	1	108.69	75.05	251.41	125.49	133.11	232.20	224.30	244.55	52.31	418.27	116.13	153.35	32.79	205.19	326.72	160.21	144.65	123.37	122.64	180.76	231.60	161.96	123.26
33	ER4b	ExonRegion	0	90.69	143.58	201.41	146.89	139.69	263.92	179.19	207.37	53.38	446.84	179.20	98.27	67.97	234.03	287.30	248.89	245.17	157.54	151.81	147.57	250.20	179.47	115.17
34	E4_Da	NovelBoundary	0	17.19	20.65	29.86	31.43	28.01	15.10	29.06	46.66	12.53	74.00	20.16	0.00	6.82	28.61	4.45	28.11	17.39	16.58	22.97	12.91	44.79	48.07	7.17
35	E4a_E5a	KnownJunction	1	131.13	176.48	191.18	147.43	135.48	157.07	140.04	214.98	60.44	471.51	175.20	119.74	25.65	212.61	290.25	316.58	206.08	196.28	135.63	146.63	249.21	173.35	126.68
36	I4	Intron	0	19.19	11.52	13.97	11.51	9.86	17.67	7.88	15.33	4.69	31.48	9.31	12.34	11.18	16.13	14.02	17.68	14.03	8.07	11.73	10.25	16.85	33.06	14.14
37	I4_AR1	ActiveIntronRegion	0	19.41	11.65	14.13	11.64	9.97	17.86	7.96	15.50	4.75	31.80	9.41	12.48	11.30	16.31	14.18	17.88	14.19	8.16	11.86	10.35	17.04	33.42	14.30
38	E5_Aa	NovelBoundary	0	49.05	24.80	21.41	32.56	12.90	0.00	8.39	17.00	13.43	35.75	10.48	0.00	20.45	26.43	15.20	23.07	4.77	4.39	31.81	11.51	31.20	37.78	14.85
39	ER5a	ExonRegion	0	136.47	110.85	207.53	152.46	82.95	124.49	87.66	207.40	64.92	449.02	159.44	75.14	63.74	221.44	293.51	258.86	198.44	201.85	134.70	147.89	267.05	175.52	156.66
40	E5_Da	NovelBoundary	1	10.37	9.60	12.18	20.01	19.86	22.77	18.90	6.33	1.79	44.40	4.53	31.81	6.82	12.01	4.45	12.22	26.74	12.64	19.86	8.63	10.63	8.33	12.72
41	E5a_E6a	KnownJunction	0	78.24	124.52	198.90	144.27	92.02	172.68	120.96	288.18	85.24	472.69	137.67	92.88	54.22	233.62	407.20	349.48	155.59	224.84	222.59	146.95	177.92	196.87	215.54
42	I5	Intron	0	28.74	9.34	12.31	18.06	11.76	16.48	9.44	11.07	3.06	42.75	8.12	7.32	8.19	21.31	21.38	24.10	10.00	18.93	13.69	10.19	21.74	19.34	12.62
43	I5_AR1	ActiveIntronRegion	0	17.82	9.14	11.94	15.13	6.91	15.25	8.75	9.32	2.94	37.98	8.94	4.60	4.19	29.39	24.28	25.58	7.00	24.66	19.60	11.42	20.15	18.42	12.14
44	I5_SR1	SilentIntronRegion	0	36.11	8.89	10.12	22.00	18.62	21.71	10.84	14.11	2.57	48.47	7.47	6.03	7.51	17.15	19.94	28.64	8.21	19.65	15.11	8.94	25.08	19.32	13.17
45	I5_AR2	ActiveIntronRegion	0	30.26	10.30	15.92	15.84	7.42	10.66	8.35	8.81	3.91	40.28	8.27	12.04	13.45	18.95	20.64	16.53	15.74	12.18	5.72	10.75	19.02	20.56	12.54
46	E6_Aa	NovelBoundary	0	39.78	12.63	32.88	31.20	32.00	25.61	27.20	23.08	15.71	89.05	15.27	12.60	25.16	31.61	26.70	27.09	9.07	25.62	18.45	14.45	42.94	48.86	21.77
47	ER6a	ExonRegion	0	169.91	111.40	277.20	180.21	162.68	233.89	149.39	263.70	105.87	593.73	199.85	123.58	97.39	264.17	362.22	361.79	240.71	239.69	179.85	168.60	281.81	254.95	224.67
48	E6a_E7a	KnownJunction	0	268.64	134.06	329.23	262.37	175.04	224.42	118.75	336.07	117.53	756.38	165.20	57.77	62.01	321.74	420.79	404.17	173.82	321.93	268.43	184.15	242.91	378.91	237.57
49	ER7a	ExonRegion	0	171.52	130.38	224.55	181.75	108.04	168.46	112.67	241.99	92.31	564.60	216.76	161.48	90.56	259.75	356.39	344.26	235.63	261.08	181.38	166.88	294.88	244.45	213.62
50	E7_Da	NovelBoundary	0	209.37	70.58	151.53	94.03	147.71	132.82	100.21	109.26	55.50	340.39	98.76	36.46	89.60	109.19	199.27	255.57	98.64	235.70	147.49	59.12	124.17	151.19	127.96
51	E7a_E8a	KnownJunction	0	193.66	99.32	138.64	161.55	121.05	141.23	118.14	173.70	64.73	339.91	167.52	112.69	55.84	242.45	294.33	248.91	195.51	127.93	93.65	95.81	213.50	212.05	118.57
52	I7	Intron	0	83.42	43.43	84.01	49.60	48.63	54.57	38.95	69.92	20.49	172.59	33.58	28.81	23.66	63.17	71.72	97.23	53.99	87.72	53.90	51.72	53.81	44.97	42.36
53	I7_AR1	ActiveIntronRegion	0	83.79	43.62	84.38	49.82	48.84	54.81	39.12	70.24	20.58	173.36	33.73	28.94	23.76	63.44	72.04	97.66	54.22	88.12	54.14	51.95	54.05	45.17	42.55
54	E8_Aa	NovelBoundary	0	123.28	57.23	87.96	52.27	41.77	47.13	64.65	68.35	21.87	150.96	28.95	12.30	0.00	41.38	70.71	70.84	32.54	56.38	58.26	18.09	63.69	34.72	28.94
55	ER8a	ExonRegion	0	164.94	109.62	240.66	166.98	117.12	133.55	97.52	224.66	70.72	438.56	163.61	95.65	51.40	180.61	354.44	271.57	174.66	172.87	124.54	127.78	236.07	187.25	142.94
56	E8_Da	KnownBoundary	0	0.00	2.76	4.32	2.00	0.00	2.56	0.00	6.08	7.38	16.28	0.00	0.00	0.00	0.00	4.45	0.00	4.02	3.77	0.00	2.56	5.68	2.51	4.35
57	E8_Db	KnownBoundary	0	0.00	9.14	5.74	1.70	8.57	0.00	2.12	20.50	3.30	7.12	0.00	0.00	0.00	0.00	8.90	0.00	0.00	1.74	4.42	0.00	0.00	2.63	0.00
58	ER8b	ExonRegion	0	10.58	19.66	17.97	7.27	16.95	27.51	14.12	35.15	11.53	27.91	3.87	12.99	1.56	9.74	29.01	11.89	6.60	9.85	8.49	11.35	18.36	9.03	11.75
59	ER8c	ExonRegion	0	7.63	13.30	15.45	13.58	18.45	13.71	9.79	32.94	11.37	24.84	4.65	6.67	9.55	6.13	11.88	7.22	8.66	13.85	9.94	19.96	9.58	8.27	14.28
60	IG33	Intergenic	0	4.65	10.88	19.16	12.21	9.43	5.63	6.15	27.55	11.07	16.72	3.53	0.74	0.84	1.05	2.43	1.97	2.74	7.89	4.75	9.35	3.56	5.10	4.63
61	IG33_AR2	ActiveIntergenicRegion	0	8.03	18.40	31.58	20.00	14.64	9.77	10.24	45.10	16.92	27.43	6.21	0.52	1.19	1.85	4.27	3.47	4.58	12.00	7.44	14.75	5.79	8.51	7.07