Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CDKN1C Gene 0 47.04 87.76 89.03 97.70 61.33 67.75 74.94 270.30 58.20 475.95 10.87 13.32 0.56 3.56 6.46 1.51 6.19 64.61 120.12 28.37 144.38 40.81 37.19 2 430149 Transcript 0 0.52 1.64 0.90 1.36 1.31 3.09 0.13 0.38 0.81 1.62 0.00 0.00 0.00 0.00 0.50 0.00 0.00 1.89 5.90 1.76 1.29 0.00 0.00 3 440480 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 313407 Transcript 0 13.71 6.25 14.07 13.05 8.66 8.35 6.54 38.24 0.00 75.86 13.64 0.00 0.00 0.00 0.00 0.00 4.11 1.87 8.28 14.45 30.95 0.00 4.35 5 380725 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 414822 Transcript 0 0.45 1.90 17.88 13.91 2.45 5.30 1.06 29.46 10.90 42.66 1.79 0.54 0.00 0.41 0.66 0.00 0.06 23.25 46.02 7.54 32.53 6.81 8.71 7 445765 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 475521 Transcript 0 1.86 5.18 8.39 3.13 1.62 3.86 7.31 18.68 3.96 15.91 0.30 0.00 0.00 0.10 0.10 0.04 0.24 3.39 2.62 1.72 6.58 0.45 0.59 9 471157 Transcript 0 3.30 0.96 1.48 1.56 0.39 0.47 1.49 3.42 1.85 8.76 0.22 0.09 0.00 0.05 0.08 0.00 0.17 0.67 6.53 1.16 12.65 1.74 4.60 10 ER1a ExonRegion 0 0.52 1.64 0.90 1.36 1.31 3.09 0.13 0.38 0.81 1.62 0.00 0.00 0.00 0.00 0.50 0.00 0.00 1.89 5.90 1.76 1.29 0.00 0.00 11 E1_Ab KnownBoundary 0 0.00 3.29 0.00 2.06 0.00 7.61 0.00 0.00 0.00 5.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 4.80 0.00 0.00 0.00 0.00 12 E1_Ac KnownBoundary 0 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 6.52 0.00 0.00 0.00 13 E1_Ad KnownBoundary 0 6.82 0.00 3.46 0.00 0.00 0.00 4.50 2.18 1.22 11.15 0.00 0.00 0.00 0.00 0.00 0.00 4.77 5.14 19.01 0.00 7.78 0.00 0.00 14 ER1b ExonRegion 0 2.91 2.80 3.52 2.04 3.34 9.40 4.63 6.70 2.78 14.34 0.48 0.00 0.00 0.00 3.99 0.00 3.30 13.63 24.29 6.12 8.26 1.56 2.57 15 E1_Ae KnownBoundary 0 142.84 101.36 96.68 99.52 77.84 261.72 205.00 304.03 60.47 673.29 36.27 0.00 0.00 0.00 0.00 17.43 18.51 331.96 683.78 114.41 424.97 73.17 204.70 16 ER1c ExonRegion 0 62.04 47.66 63.26 61.07 37.13 123.44 102.19 189.27 40.60 445.57 19.69 3.52 0.00 3.25 23.21 11.89 15.06 223.12 399.56 72.74 249.57 45.97 124.07 17 ER1d ExonRegion 0 86.07 57.84 75.97 68.60 52.33 165.25 126.22 214.52 47.35 519.17 30.71 4.33 0.00 3.25 24.50 11.89 16.50 269.98 477.10 84.87 311.70 52.09 136.72 18 ER1e ExonRegion 0 39.38 24.35 79.09 58.37 19.71 60.48 42.20 177.10 42.69 420.83 15.75 2.53 0.00 0.52 5.50 2.92 5.48 157.51 181.30 34.70 154.86 15.02 45.10 19 E1_Da KnownBoundary 0 0.00 0.00 15.58 5.16 0.00 2.90 0.00 17.83 1.59 15.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.51 4.80 8.44 18.72 0.00 0.00 20 E1a_E1f KnownJunction 0 6.82 6.64 57.24 42.55 3.90 0.00 6.54 115.29 39.47 328.01 0.00 5.70 0.00 0.00 0.00 0.00 12.44 24.21 55.63 15.53 144.00 10.90 16.65 21 ER1f ExonRegion 0 0.45 1.90 17.88 13.91 2.45 5.30 1.06 29.46 10.90 42.66 1.79 0.54 0.00 0.41 0.66 0.00 0.06 23.25 46.02 7.54 32.53 6.81 8.71 22 E1_Af KnownBoundary 0 6.74 0.00 19.13 12.49 3.82 13.17 2.25 17.79 9.61 16.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.61 14.40 9.08 17.36 3.12 7.68 23 E1_Ag KnownBoundary 0 6.45 2.96 51.59 31.60 0.00 34.58 1.77 84.82 26.94 273.29 4.32 0.00 0.00 0.00 5.07 0.00 7.39 40.50 27.29 28.83 207.02 18.37 4.35 24 ER1g ExonRegion 0 11.01 8.34 85.29 52.61 5.89 26.04 8.08 122.55 43.48 369.53 9.47 4.33 0.00 0.00 4.93 0.00 11.55 57.10 57.66 38.08 249.90 17.71 17.91 25 ER1h ExonRegion 0 1.71 11.71 110.98 63.61 15.41 45.11 28.23 226.39 66.94 586.03 18.58 10.87 0.00 3.45 7.64 4.18 6.60 102.86 115.10 40.07 213.23 25.95 37.60 26 E1_Db KnownBoundary 0 0.00 21.31 97.34 36.33 0.00 67.80 52.42 237.37 81.02 654.03 22.01 12.60 0.00 2.18 10.51 0.00 14.21 98.49 29.55 49.98 166.98 3.12 31.16 27 E1b_E2b KnownJunction 0 0.00 5.20 18.15 16.58 0.00 16.75 19.87 43.37 6.74 151.04 4.74 0.00 0.00 0.00 0.00 0.00 0.00 10.74 3.58 6.52 18.84 0.00 0.00 28 ER1i ExonRegion 0 12.43 13.31 26.73 19.25 3.22 16.02 9.03 74.63 18.23 185.45 7.21 3.12 0.00 2.63 3.53 1.28 2.74 38.51 38.40 10.68 80.37 8.31 15.91 29 E1_Ah KnownBoundary 0 3.70 26.77 41.96 63.20 7.72 7.72 19.56 103.51 27.26 198.72 4.63 0.00 0.00 0.00 0.00 0.00 9.07 60.36 68.05 14.70 31.51 5.57 3.67 30 E1_Dc KnownBoundary 0 6.45 32.17 30.96 41.72 3.65 30.04 22.35 112.67 19.18 199.99 2.37 0.00 0.00 4.59 0.00 0.00 0.00 17.87 13.27 8.63 48.62 2.82 12.04 31 ER1j ExonRegion 0 10.58 43.72 49.63 68.83 10.70 31.17 31.78 178.89 32.11 377.33 9.66 0.00 0.00 4.87 2.90 0.00 6.60 52.20 80.43 26.06 83.19 6.25 24.23 32 ER1k ExonRegion 0 21.96 49.27 75.72 73.13 8.28 35.98 29.80 257.44 53.27 555.84 17.94 4.98 0.00 4.14 4.11 0.00 15.13 48.88 43.75 36.53 178.75 14.98 22.33 33 E1d_E2b KnownJunction 0 43.12 58.28 117.59 96.39 16.64 56.10 57.32 369.54 83.33 789.34 23.90 20.26 0.00 7.12 15.70 0.00 26.74 84.98 51.20 58.36 242.91 19.47 46.01 34 E2_Aa NovelBoundary 0 0.00 0.00 0.00 3.30 0.00 2.78 3.89 11.38 1.30 5.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 19.34 0.00 15.62 35 ER2a ExonRegion 0 3.30 0.96 1.48 1.56 0.39 0.47 1.49 3.42 1.85 8.76 0.22 0.09 0.00 0.05 0.08 0.00 0.17 0.67 6.53 1.16 12.65 1.74 4.60 36 E2_Ab KnownBoundary 0 7.56 3.03 0.00 4.03 3.74 0.00 5.74 8.01 2.46 6.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.29 0.00 16.56 37 ER2b ExonRegion 0 36.39 59.15 142.42 137.30 43.90 83.24 71.80 438.50 92.35 897.17 24.17 4.78 0.00 10.20 9.82 0.40 14.65 121.32 134.45 52.89 258.19 37.32 69.72 38 E2_Da KnownBoundary 0 0.00 2.70 3.34 0.00 0.00 2.67 2.25 8.01 5.06 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.26 0.00 0.00 5.07 0.00 0.00 39 E2a_E2c KnownJunction 0 46.16 106.89 164.81 190.35 60.87 179.44 97.42 507.63 114.06 909.92 27.22 0.00 0.00 9.54 4.70 3.85 13.56 103.05 274.55 73.95 319.45 38.64 53.86 40 E2a_E2d KnownJunction 0 13.71 6.25 14.07 13.05 8.66 8.35 6.54 38.24 0.00 75.86 13.64 0.00 0.00 0.00 0.00 0.00 4.11 1.87 8.28 14.45 30.95 0.00 4.35 41 ER2c ExonRegion 0 1.86 5.18 8.39 3.13 1.62 3.86 7.31 18.68 3.96 15.91 0.30 0.00 0.00 0.10 0.10 0.04 0.24 3.39 2.62 1.72 6.58 0.45 0.59 42 E2_Ac KnownBoundary 0 0.00 3.09 4.55 1.40 0.00 0.00 5.79 8.09 3.04 3.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 2.94 6.30 0.00 0.00 43 E2_Ad KnownBoundary 0 0.00 0.00 2.72 2.80 8.66 0.00 2.25 5.75 3.39 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.12 0.00 0.00 44 ER2d ExonRegion 1 49.10 103.31 156.36 154.01 59.40 138.27 88.71 475.32 107.45 871.42 28.99 0.00 0.00 8.77 8.70 2.97 15.18 88.69 221.70 63.83 289.57 40.84 49.92 45 ER2e ExonRegion 0 134.99 285.37 144.50 162.41 135.69 150.32 176.46 494.63 104.71 852.02 16.02 11.07 0.84 8.06 10.11 0.63 10.23 44.61 126.32 39.39 158.31 77.76 55.82 46 E2_Db KnownBoundary 1 187.96 303.56 238.31 313.41 327.25 262.58 318.72 977.85 161.37 1305.11 10.21 57.02 0.00 4.53 14.09 4.36 0.00 63.47 289.61 63.21 80.00 114.14 120.19 47 ER2f ExonRegion 1 141.92 184.67 143.10 184.03 253.76 197.85 230.41 568.75 99.94 783.71 5.38 48.56 0.00 2.68 14.90 2.25 3.03 37.80 224.44 48.88 55.63 117.30 90.88 48 E2_Dc KnownBoundary 0 82.98 65.25 9.05 18.58 144.74 119.82 125.86 18.36 4.02 24.39 0.00 18.31 0.00 2.12 13.35 0.00 4.49 0.00 76.14 22.24 24.40 82.42 27.66 49 ER2g ExonRegion 1 111.99 228.46 186.84 268.63 189.36 151.29 202.84 628.41 121.92 871.02 11.63 47.27 2.52 4.46 11.43 1.86 10.06 94.12 286.97 46.23 260.97 113.25 65.98 50 ER2h ExonRegion 0 88.07 52.42 44.93 54.52 39.39 22.21 48.91 84.69 9.47 77.80 0.00 2.16 0.00 1.99 1.93 0.00 0.00 20.22 39.11 10.52 30.24 10.42 11.26