Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RASSF7 Gene 0 24.85 2.18 11.56 11.77 5.87 10.79 4.62 27.95 8.32 15.90 34.80 4.03 5.02 52.61 50.06 31.78 35.22 13.44 11.97 9.14 1.28 1.77 2.50 2 431809 Transcript 0 1.46 0.00 0.00 0.00 0.00 1.31 0.00 0.59 0.00 0.00 0.42 0.00 0.00 2.63 0.47 1.37 0.76 0.00 0.00 1.04 0.00 0.00 0.67 3 414138 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.69 0.00 0.00 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 397582 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 418716 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 344375 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 397583 Transcript 0 0.54 0.00 0.00 0.00 0.00 0.23 0.00 0.33 0.00 0.00 1.24 0.00 0.00 2.15 2.54 1.77 1.69 0.94 0.41 0.54 0.00 0.00 0.00 8 454668 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 2.92 0.00 0.00 0.00 0.00 0.00 0.00 1.18 0.00 0.00 0.84 0.00 0.00 5.27 0.94 2.73 1.52 0.00 0.00 2.07 0.00 0.00 1.35 10 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.69 0.00 0.00 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E2_Ac KnownBoundary 0 6.22 2.96 1.48 3.40 0.00 5.79 5.83 0.00 0.00 3.41 5.05 0.00 0.00 4.71 8.90 3.85 12.44 1.70 0.00 0.00 2.90 0.00 0.00 13 ER2b ExonRegion 0 1.59 1.09 0.88 0.83 0.10 0.00 2.13 0.00 0.00 2.05 7.04 0.00 0.00 3.36 5.08 1.91 5.07 0.00 0.34 0.38 1.65 0.00 0.42 14 ER2c ExonRegion 1 65.86 2.69 2.38 4.45 13.77 9.01 11.18 5.80 0.40 7.45 35.13 0.00 0.00 21.45 49.49 36.36 43.59 3.15 11.06 6.38 6.29 3.98 2.94 15 E2a_E4a KnownJunction 1 166.70 2.76 6.50 27.74 25.13 27.54 21.95 33.27 2.92 20.07 63.38 0.00 0.00 36.73 105.32 93.57 63.21 26.65 17.98 14.38 5.87 6.06 3.76 16 ER3a ExonRegion 0 0.54 0.00 0.00 0.00 0.00 0.23 0.00 0.33 0.00 0.00 1.24 0.00 0.00 2.15 2.54 1.77 1.69 0.94 0.41 0.54 0.00 0.00 0.00 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3b ExonRegion 0 0.00 0.00 0.00 0.00 0.30 0.00 0.00 0.00 0.00 0.13 0.00 0.00 0.00 5.53 5.05 1.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER4a ExonRegion 0 26.67 0.65 7.90 11.59 6.23 8.54 3.03 24.75 5.01 18.26 34.33 1.39 3.01 27.23 27.88 25.05 33.46 5.47 8.27 7.34 2.73 1.03 0.29 20 E4a_E5a KnownJunction 1 14.15 0.00 22.00 18.75 4.33 0.00 2.25 47.77 6.83 29.55 86.65 0.00 0.00 53.86 42.28 17.69 85.93 23.01 21.55 21.28 9.45 5.51 4.10 21 ER5a ExonRegion 0 28.91 2.64 19.92 17.24 8.83 15.87 7.50 39.87 12.89 23.63 48.74 4.22 7.50 79.52 67.68 41.76 47.38 18.54 15.90 10.92 2.01 1.29 1.72 22 E5a_E6a KnownJunction 0 29.56 9.08 14.04 21.84 8.32 10.33 10.60 51.30 22.63 16.71 52.01 0.00 0.00 94.00 91.11 39.05 83.68 34.07 20.80 9.08 2.97 0.00 0.00 23 ER6a ExonRegion 0 32.26 1.80 15.46 15.08 4.60 21.48 6.63 41.38 15.17 25.16 57.54 5.24 9.63 92.05 68.08 41.31 65.35 24.75 12.07 10.57 0.87 5.04 4.58 24 E6_Da KnownBoundary 0 39.86 0.00 18.80 18.08 0.00 11.58 3.71 33.06 14.84 28.58 25.85 32.56 6.66 71.58 33.13 30.85 46.94 17.66 9.13 3.26 0.00 2.39 8.71 25 E6a_E6b KnownJunction 0 3.19 0.00 0.00 3.63 0.00 5.56 1.68 0.00 0.00 1.40 7.16 0.00 0.00 9.48 9.52 3.67 4.02 1.53 0.00 3.26 0.00 5.08 0.00 26 E6a_E6c KnownJunction 0 9.56 0.00 1.30 2.06 0.00 0.00 0.00 2.51 4.46 0.00 10.32 0.00 0.00 11.54 4.45 0.00 14.21 0.00 0.00 0.00 0.00 2.57 0.00 27 ER6b ExonRegion 0 24.94 3.42 13.98 20.44 5.49 9.84 8.14 43.87 10.01 23.14 37.46 6.74 6.89 75.37 57.62 63.32 51.98 30.31 18.39 10.50 2.26 0.53 6.91 28 E6_Ab KnownBoundary 0 34.67 8.81 21.50 12.59 12.22 14.88 10.07 49.78 8.88 25.79 31.17 0.00 6.98 69.10 57.61 34.78 38.62 31.42 11.48 11.95 3.03 2.33 8.02 29 ER6c ExonRegion 0 38.69 4.02 11.03 15.17 10.83 19.10 7.06 35.81 7.65 31.08 34.58 1.43 0.00 84.00 67.29 54.73 40.74 26.75 22.96 13.36 1.93 3.30 6.23 30 E6_Db KnownBoundary 0 55.05 2.63 7.81 15.48 14.43 12.10 5.70 32.98 6.05 25.14 29.64 12.30 0.00 68.87 71.70 41.01 26.83 34.03 14.12 11.06 0.00 6.25 0.00 31 E6b_E6c KnownJunction 0 7.11 0.00 1.18 1.33 0.00 2.78 0.00 1.97 0.00 3.73 12.42 0.00 0.00 14.30 0.00 4.36 0.00 0.00 0.00 0.00 0.00 2.63 0.00 32 ER6d ExonRegion 0 49.98 2.24 8.81 13.44 5.92 13.13 3.38 23.27 4.99 19.97 23.73 7.74 1.70 54.35 53.78 29.02 34.00 13.42 9.16 8.48 2.62 1.33 1.87 33 E6_Ac KnownBoundary 0 69.79 3.03 17.56 17.18 3.40 11.24 6.71 36.84 9.98 23.50 30.11 5.85 6.49 67.57 127.94 33.15 38.99 13.97 19.95 16.81 2.41 0.00 0.00 34 ER6e ExonRegion 0 60.03 6.10 16.38 12.64 3.16 10.50 5.06 29.70 9.77 22.00 57.99 2.76 4.69 80.17 103.39 44.04 47.11 13.44 17.95 15.67 1.40 4.36 0.53 35 ER6f ExonRegion 0 57.70 8.21 16.99 16.30 3.20 12.28 4.04 45.60 13.51 26.45 54.07 0.80 0.68 83.09 64.36 35.70 42.04 22.85 20.29 16.49 0.00 5.84 7.69 36 E6_Dd KnownBoundary 0 83.27 5.99 12.09 25.94 12.31 28.79 12.37 72.00 16.17 28.07 57.54 14.10 0.00 95.47 64.53 49.56 50.21 31.63 20.52 29.21 0.00 2.88 16.48 37 ER6g ExonRegion 0 32.05 3.37 14.66 16.27 8.90 13.17 4.77 41.54 12.56 16.09 53.50 9.62 8.88 61.60 84.57 48.17 50.91 16.40 19.98 17.57 0.50 3.64 5.03 38 E6_De KnownBoundary 0 100.68 3.09 6.48 15.92 23.68 19.82 10.55 33.48 1.62 4.06 28.59 48.17 54.05 75.87 147.35 61.52 48.71 5.47 31.34 8.88 3.15 3.12 8.71 39 ER6h ExonRegion 1 35.98 2.03 4.90 9.54 10.70 11.00 5.30 17.28 1.24 1.15 21.26 30.31 32.83 38.98 81.24 29.72 16.50 5.54 12.74 4.26 2.20 2.08 2.94 40 ER6i ExonRegion 1 30.30 2.03 2.06 7.82 6.76 9.36 4.74 14.56 1.24 0.12 16.99 27.12 29.37 32.65 70.39 25.97 16.50 2.92 11.74 4.26 2.20 2.08 2.94 41 ER6j ExonRegion 0 7.58 1.36 0.00 3.18 1.78 2.14 0.00 7.06 0.51 0.00 4.67 11.18 9.38 12.45 18.86 8.42 6.33 0.92 2.12 0.18 0.55 0.35 0.24