Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM53B Gene 0 4.27 2.88 6.15 3.14 4.08 8.83 3.58 8.14 10.74 5.45 13.23 5.37 5.70 25.91 12.10 19.81 5.02 14.42 10.05 11.42 7.33 6.46 4.64 2 494792 Transcript 0 2.03 2.63 2.70 1.12 0.89 1.94 2.69 4.59 4.99 3.60 0.77 1.64 0.10 1.70 1.08 0.82 1.87 5.50 2.34 5.30 0.75 2.28 1.31 3 392754 Transcript 0 0.00 1.27 0.00 0.00 0.00 1.77 0.00 0.00 0.14 0.46 0.99 0.00 0.00 2.96 0.56 1.33 0.00 0.75 0.35 1.15 0.40 0.12 0.00 4 280780 Transcript 0 1.17 0.45 0.41 0.00 1.18 0.00 1.75 0.28 0.21 0.38 0.21 0.39 2.56 0.63 0.77 0.33 0.73 1.42 1.76 3.29 0.48 0.68 0.00 5 337318 Transcript 0 8.51 1.52 17.75 10.98 3.83 25.48 10.91 19.32 31.75 17.60 58.65 15.36 13.46 88.43 34.81 74.66 24.69 32.99 34.33 36.57 17.47 16.67 23.97 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 Ix Intron 0 15.27 30.54 21.16 22.25 17.08 12.00 35.12 28.33 24.45 9.50 3.66 12.39 17.36 5.84 11.71 14.64 12.88 10.41 8.54 31.45 2.17 3.12 14.70 12 Ix_SR2 SilentIntronRegion 0 8.94 17.50 10.38 9.88 20.58 39.19 70.99 17.23 11.83 5.54 5.06 15.12 12.13 3.08 5.98 18.93 16.03 4.75 7.76 31.31 2.57 2.97 8.74 13 Ix_AR1 ActiveIntronRegion 0 14.86 37.09 22.10 34.32 19.41 6.70 35.68 40.73 36.81 10.71 2.15 15.26 27.05 7.29 14.52 11.16 20.79 13.89 6.28 47.08 2.30 3.69 22.11 14 Ix_SR1 SilentIntronRegion 0 16.98 30.57 23.30 19.52 15.18 8.08 26.42 25.14 21.63 9.87 4.03 10.41 14.06 5.82 11.75 15.28 8.42 10.12 9.80 24.15 2.01 2.89 12.63 15 Ix Intron 0 15.93 20.29 20.51 20.35 26.94 18.30 30.67 23.17 24.03 13.25 3.28 9.78 10.41 4.60 13.39 8.34 5.88 8.69 4.26 22.18 3.53 4.46 9.56 16 Ix_SR2 SilentIntronRegion 0 14.65 13.99 14.23 12.99 28.09 15.76 28.98 22.86 15.99 8.77 2.36 7.61 7.63 3.56 10.89 5.28 7.02 7.08 3.03 18.87 2.61 2.07 8.89 17 Ix_AR2 ActiveIntronRegion 0 35.88 10.36 26.49 21.22 50.58 25.67 85.36 19.01 29.00 20.92 5.43 35.05 1.79 8.20 17.13 5.10 5.19 9.41 3.19 35.76 3.88 2.08 19.30 18 Ix_AR1 ActiveIntronRegion 0 15.27 19.13 24.43 25.68 23.07 14.38 30.60 22.28 31.56 12.26 5.90 7.96 5.69 6.83 15.20 14.63 8.85 15.01 8.72 28.79 6.75 4.94 13.33 19 Ix_SR1 SilentIntronRegion 0 17.43 33.00 26.06 26.45 27.86 26.63 29.54 25.15 28.39 21.39 1.60 13.73 21.25 3.49 15.24 6.41 0.58 3.97 1.20 19.02 1.29 8.08 5.56 20 ER4a ExonRegion 0 1.00 0.04 0.00 0.00 0.00 0.00 0.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 Ix Intron 0 11.91 24.34 8.16 14.51 14.10 7.04 17.86 15.43 19.40 11.30 2.42 8.60 5.96 2.05 7.73 7.96 5.01 7.07 3.70 23.75 0.79 5.58 6.30 23 Ix_SR2 SilentIntronRegion 0 29.32 8.96 1.15 0.00 15.16 1.15 8.34 6.49 2.32 1.08 2.43 4.49 9.38 1.02 13.32 5.61 4.16 0.00 4.01 21.43 1.39 0.00 5.55 24 Ix_SR1 SilentIntronRegion 0 10.91 23.87 9.98 14.12 11.17 5.87 17.22 17.87 21.25 8.67 2.27 7.40 3.11 2.14 7.91 8.29 4.19 6.75 2.48 21.68 0.47 4.87 6.88 25 Ix_AR1 ActiveIntronRegion 0 7.22 29.79 8.67 19.62 16.59 10.10 21.57 15.98 23.16 17.16 2.55 11.09 7.61 2.29 5.73 8.42 6.08 9.69 4.77 26.51 0.90 8.09 5.97 26 Ix Intron 0 5.72 18.54 9.25 9.60 10.84 5.29 17.44 9.57 12.74 8.08 1.63 7.66 10.58 1.19 6.02 7.03 5.02 5.60 1.61 22.64 0.37 3.17 5.95 27 Ix_AR1 ActiveIntronRegion 0 4.58 17.34 10.31 9.55 10.85 5.13 11.80 11.59 13.16 8.57 2.40 7.71 13.34 1.39 5.82 8.70 5.23 6.32 2.08 25.53 0.55 4.67 6.49 28 Ix_SR1 SilentIntronRegion 0 8.27 21.53 7.17 9.91 11.04 5.75 29.96 5.40 12.10 7.20 0.00 7.70 4.84 0.79 6.60 3.57 4.66 4.14 0.64 16.86 0.00 0.00 4.92 29 ER5a ExonRegion 0 4.93 9.52 1.05 0.00 0.63 7.48 4.91 1.18 1.06 1.71 0.57 0.30 0.00 0.70 0.00 0.70 1.05 1.71 0.43 0.92 0.00 2.25 1.08 30 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER6a ExonRegion 0 2.56 14.39 12.09 5.05 6.83 11.52 7.94 25.87 21.24 18.68 2.11 8.92 0.08 5.35 3.64 3.50 7.66 32.59 10.69 33.88 4.00 7.82 11.37 32 E6_Da NovelBoundary 0 380.36 326.06 134.74 93.49 227.16 190.17 221.26 101.21 61.28 57.24 188.57 260.78 131.32 208.96 269.24 175.25 162.97 100.52 175.63 161.52 70.80 139.37 68.80 33 E6a_E8a KnownJunction 0 13.11 9.93 19.10 8.42 0.00 4.77 20.27 28.67 40.22 25.52 4.47 11.55 0.00 14.07 9.64 3.85 15.05 36.52 17.32 33.24 5.00 18.80 4.35 34 Ix Intron 0 6.35 20.93 7.53 15.38 8.88 9.73 16.42 11.92 11.51 5.41 3.46 10.83 9.69 4.31 4.82 6.97 4.07 7.63 5.31 15.22 2.13 2.74 3.99 35 Ix_SR4 SilentIntronRegion 0 5.13 26.20 5.85 8.35 5.27 5.34 14.59 8.58 7.56 2.83 2.21 10.66 9.35 2.46 2.36 6.62 3.41 8.94 4.36 13.89 1.87 2.79 3.69 36 Ix_AR8 ActiveIntronRegion 0 6.64 23.20 8.29 17.97 9.98 7.83 20.64 9.31 13.42 4.87 4.93 15.79 21.61 3.53 3.23 7.30 4.33 5.91 7.92 23.41 1.76 1.05 4.97 37 Ix_SR3 SilentIntronRegion 0 5.41 13.57 8.42 14.08 6.24 9.02 17.36 10.01 9.73 4.51 3.54 13.01 10.71 5.25 4.22 8.65 4.39 7.27 6.29 21.34 2.49 3.08 3.58 38 Ix_AR7 ActiveIntronRegion 0 5.58 15.40 7.07 12.73 10.35 10.28 23.56 18.33 15.31 5.86 2.96 19.78 9.55 8.24 10.20 4.16 6.85 4.67 2.90 24.15 1.95 6.27 1.28 39 Ix_AR6 ActiveIntronRegion 0 11.31 21.47 12.71 22.17 13.16 16.64 19.29 17.47 19.02 10.06 6.51 9.74 9.47 4.17 4.10 5.63 6.20 10.35 7.74 16.63 1.95 3.21 3.84 40 Ix_AR5 ActiveIntronRegion 0 13.59 34.84 10.08 40.37 18.02 19.93 38.92 26.50 23.96 14.81 2.83 4.33 14.28 2.96 2.64 6.08 8.58 7.60 3.96 13.52 6.17 0.00 6.92 41 Ix_AR4 ActiveIntronRegion 0 15.42 50.84 11.03 27.65 13.38 15.72 30.26 17.53 14.12 11.80 1.93 4.33 0.00 1.62 5.80 2.97 6.13 7.39 0.00 11.25 0.00 0.00 2.94 42 Ix_AR3 ActiveIntronRegion 0 13.61 47.35 13.48 24.73 10.70 7.60 32.15 22.72 14.82 11.47 3.59 4.33 4.69 0.70 6.22 2.97 2.83 9.24 0.00 12.16 4.41 3.87 2.94 43 Ix_AR2 ActiveIntronRegion 0 11.05 38.41 15.93 21.20 21.41 28.73 28.69 30.15 13.31 12.36 3.87 4.81 4.69 0.00 14.51 2.97 3.30 12.93 0.00 17.73 4.41 6.25 2.94 44 Ix_SR1 SilentIntronRegion 0 11.52 32.31 16.07 18.93 24.08 37.08 28.54 29.96 14.14 11.85 3.87 7.22 6.77 1.08 14.18 2.97 3.30 8.62 0.00 16.78 4.41 10.19 2.94 45 Ix_AR1 ActiveIntronRegion 0 12.64 59.74 9.49 26.27 21.06 22.96 19.99 26.53 21.95 13.22 3.36 20.20 9.10 3.26 8.62 5.92 2.86 4.63 2.22 14.34 0.18 5.34 3.79 46 ER7a ExonRegion 0 0.00 2.54 0.00 0.00 0.00 3.55 0.00 0.00 0.00 0.92 1.97 0.00 0.00 5.55 1.12 2.65 0.00 1.51 0.00 1.83 0.81 0.00 0.00 47 E7_Ab KnownBoundary 0 0.00 2.89 0.00 0.00 0.00 2.90 0.00 3.74 0.00 0.00 6.84 0.00 0.00 14.30 0.00 12.05 0.00 5.02 3.48 3.26 3.03 0.00 0.00 48 ER7b ExonRegion 0 1.48 0.82 0.79 0.00 0.15 4.48 0.66 1.52 0.82 0.38 12.28 0.83 1.95 12.44 4.98 26.12 2.31 1.77 6.40 1.66 6.31 0.97 2.74 49 E7_Ac KnownBoundary 0 0.00 0.00 7.16 0.00 3.57 4.32 0.00 4.11 4.51 0.00 6.58 0.00 0.00 28.08 17.92 24.87 0.00 1.87 7.81 5.75 2.53 0.00 0.00 50 ER7c ExonRegion 0 4.12 0.16 6.89 0.00 2.89 4.71 2.76 3.46 3.61 0.84 17.03 1.76 5.32 49.07 23.99 39.52 3.66 6.94 5.34 8.22 4.05 0.06 10.79 51 E7a_E8a KnownJunction 0 6.89 0.00 9.25 1.47 0.00 12.49 4.50 3.78 8.33 1.42 23.69 6.30 5.84 74.46 4.45 59.13 8.42 15.01 13.46 12.46 8.90 3.12 23.90 52 E8_Aa NovelBoundary 0 11.11 0.00 1.83 1.30 0.00 0.00 0.00 1.73 3.56 1.26 0.00 0.00 0.00 0.00 0.00 4.36 0.00 5.64 0.00 0.00 6.18 0.00 4.10 53 ER8a ExonRegion 0 21.81 25.72 31.50 17.89 27.21 64.63 25.65 68.68 77.44 36.76 82.51 41.42 46.75 156.08 67.72 111.05 40.88 106.94 65.27 87.85 50.41 40.73 33.58 54 E8a_E9a KnownJunction 0 36.75 47.03 32.49 28.07 40.66 71.15 16.25 86.54 77.46 28.53 102.87 38.26 73.86 190.54 102.36 153.98 57.32 117.85 85.08 78.04 34.41 44.70 57.96 55 E8a_E10a NovelJunction 0 0.00 5.33 13.57 4.13 0.00 2.33 0.00 4.39 9.58 5.72 24.06 6.30 0.00 31.08 9.52 20.17 3.55 22.84 16.38 10.99 2.59 7.84 11.87 56 ER9a ExonRegion 0 26.44 19.04 38.43 26.61 31.82 52.21 21.38 66.75 74.38 37.01 116.99 63.53 51.33 186.86 96.64 192.22 32.65 125.21 90.35 76.67 36.34 78.95 51.74 57 E9_Da NovelBoundary 0 10.82 0.00 1.54 4.13 3.90 0.00 5.65 2.55 3.62 0.00 4.84 0.00 0.00 2.47 0.00 3.93 0.00 2.57 4.71 2.68 0.00 0.00 0.00 58 E9a_E10a KnownJunction 0 37.93 12.17 50.71 27.20 30.98 60.82 39.44 62.10 77.57 54.85 146.41 62.12 60.06 211.14 103.22 127.32 25.15 113.75 122.54 79.51 35.65 100.85 39.78 59 ER10a ExonRegion 0 18.75 12.09 42.26 21.30 19.20 54.92 18.30 47.24 69.52 34.56 93.41 34.37 34.80 180.41 84.07 130.30 31.40 94.12 63.58 71.14 51.70 41.60 27.87 60 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 E10a_E13a KnownJunction 0 16.23 2.57 34.74 21.68 7.22 49.80 21.33 37.79 62.38 34.54 115.98 30.31 26.46 172.94 67.50 146.29 48.81 64.46 67.30 71.84 34.29 32.45 47.29 62 E10a_E14a KnownJunction 0 0.00 0.00 1.15 0.00 0.00 0.00 0.00 2.38 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.00 0.36 0.00 0.00 0.00 0.00 0.71 0.47 0.00 0.23 0.00 64 ER12a ExonRegion 0 2.34 0.90 0.81 0.00 2.36 0.00 3.51 0.55 0.41 0.75 0.43 0.79 5.12 1.25 1.54 0.67 1.46 2.84 3.52 6.58 0.95 1.36 0.00 65 I12_SR8 SilentIntronRegion 0 5.30 1.67 3.40 0.00 1.41 1.39 1.40 0.79 3.43 3.45 2.37 3.73 2.98 2.86 2.10 3.19 1.01 9.66 3.93 5.21 8.34 1.27 2.39 66 I12_SR9 SilentIntronRegion 0 8.47 0.00 17.16 1.36 10.70 12.84 4.41 6.91 6.18 3.44 3.87 4.33 4.69 7.31 0.00 5.94 6.60 4.93 6.37 6.38 8.81 6.25 2.94 67 I12_AR12 ActiveIntronRegion 0 8.47 0.00 14.53 1.36 12.23 12.31 3.97 7.16 6.70 3.11 3.87 4.33 4.69 4.18 0.00 3.82 6.60 3.70 6.37 6.38 11.96 6.25 2.94 68 I12_SR10 SilentIntronRegion 0 2.20 0.00 11.52 1.85 4.36 8.13 4.50 10.06 7.14 3.15 4.11 8.55 0.96 1.67 1.56 4.38 1.69 2.27 1.10 6.08 8.42 3.82 1.96 69 I12_AR13 ActiveIntronRegion 0 2.08 0.95 5.43 0.43 3.73 6.18 3.38 6.20 4.72 2.97 3.50 5.40 6.24 4.46 0.69 4.49 2.32 8.18 1.34 6.88 7.48 2.30 2.41 70 E13_Aa NovelBoundary 0 15.93 0.00 8.22 1.30 0.00 9.88 6.18 8.05 9.11 3.87 2.42 0.00 0.00 2.24 0.00 4.10 0.00 6.34 7.81 0.00 0.00 0.00 8.28 71 ER13a ExonRegion 0 0.80 0.48 0.76 0.28 0.45 1.16 0.48 0.86 1.12 0.65 1.33 0.41 0.45 3.93 2.12 3.03 0.56 1.51 1.37 1.31 0.65 0.88 0.64 72 E13_Da NovelBoundary 0 17.56 0.00 1.51 0.00 17.06 0.00 2.25 2.55 3.12 0.00 0.00 0.00 0.00 2.18 0.00 3.50 4.68 6.96 4.71 0.00 0.00 2.45 0.00 73 E14_Aa NovelBoundary 0 14.30 0.00 2.57 0.00 16.21 0.00 3.80 2.22 3.27 0.00 0.00 0.00 0.00 0.00 0.00 7.18 0.00 4.97 0.00 0.00 0.00 0.00 0.00 74 ER14a ExonRegion 0 4.72 0.36 1.73 1.09 4.06 1.43 1.65 1.56 2.36 0.92 0.56 0.53 1.26 2.04 0.80 2.56 0.49 0.71 1.99 0.89 0.72 0.74 0.27