Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C10orf88	Gene	0	42.87	67.96	38.60	42.50	68.39	88.25	53.52	41.32	45.11	31.15	49.34	67.38	43.18	39.89	32.56	32.20	33.00	19.84	21.71	34.75	14.41	39.82	22.66
2	481909	Transcript	0	2.87	9.40	8.37	8.36	6.78	9.87	1.80	12.67	17.39	11.64	28.58	0.00	0.00	67.52	14.03	39.92	25.20	25.30	28.78	22.49	14.50	14.74	11.80
3	368891	Transcript	0	29.63	38.52	25.14	21.67	26.11	23.18	14.17	14.22	12.82	8.32	13.38	19.45	12.01	11.81	12.53	10.99	8.01	5.92	6.47	8.14	5.70	11.04	4.12
4	470158	Transcript	0	0.00	3.16	0.00	1.70	0.00	6.98	2.08	4.03	3.36	4.16	2.58	0.00	6.66	9.24	0.00	7.95	0.00	1.62	0.00	0.00	0.00	0.00	0.00
5	462191	Transcript	0	1.27	4.85	1.64	1.23	1.59	1.09	0.84	0.00	0.07	0.52	1.72	3.45	4.61	2.42	3.64	2.66	0.98	3.00	0.00	5.12	0.00	0.65	0.87
6	ER1a	ExonRegion	0	0.00	1.71	0.00	0.00	0.00	2.01	1.84	0.00	0.64	0.00	1.06	0.00	0.00	0.47	0.00	0.77	0.00	0.00	0.00	0.00	0.00	0.00	1.61
7	E1_Ab	KnownBoundary	0	0.00	3.16	0.00	0.00	0.00	2.38	2.25	0.00	1.74	0.00	0.00	0.00	0.00	2.30	0.00	7.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	5.03	15.84	4.84	2.70	12.39	35.72	11.51	7.85	8.76	7.75	13.43	0.00	4.66	25.30	9.34	26.84	25.74	18.92	17.55	12.01	14.11	7.19	12.51
9	E1a_E2a	KnownJunction	1	3.11	15.92	13.33	13.35	8.57	13.29	1.99	22.47	25.84	18.40	46.01	0.00	0.00	105.30	10.75	59.56	38.62	40.42	53.84	29.59	20.57	21.31	19.12
10	E1a_E2b	KnownJunction	0	0.00	3.35	1.24	2.06	0.00	0.00	0.00	0.00	3.01	0.00	0.00	0.00	0.00	9.65	0.00	0.00	0.00	1.99	0.00	0.00	0.00	0.00	0.00
11	I1	Intron	0	2.96	3.30	2.96	7.50	7.30	8.65	4.39	4.75	5.03	2.65	4.14	4.84	4.31	13.13	5.61	8.56	9.01	4.56	6.59	6.12	3.90	5.53	6.93
12	I1_AR1	ActiveIntronRegion	0	1.92	3.88	0.00	6.28	22.55	9.47	4.41	4.64	5.49	1.81	1.47	0.00	5.12	9.11	5.32	9.47	7.64	8.01	9.91	13.99	5.92	5.02	3.10
13	I1_AR2	ActiveIntronRegion	0	4.14	3.55	5.00	12.04	6.32	9.49	6.40	7.63	7.85	4.00	6.58	7.18	5.30	18.86	7.41	12.70	13.03	6.19	8.71	8.37	5.50	8.17	10.27
14	E2_Ab	NovelBoundary	0	6.67	3.35	3.25	10.65	3.40	9.77	4.37	1.97	11.72	4.22	2.37	7.50	0.00	7.12	16.44	7.86	8.23	13.27	0.00	14.25	11.37	0.00	14.77
15	ER2a	ExonRegion	1	5.50	10.57	11.76	11.72	11.77	14.30	1.59	15.56	25.69	16.52	38.66	0.00	0.00	96.80	31.33	59.44	36.97	35.48	32.49	37.87	22.92	22.92	14.68
16	ER2b	ExonRegion	0	16.86	40.94	13.58	20.23	25.78	70.57	33.41	22.85	38.80	22.11	73.32	31.26	17.53	60.03	26.71	44.76	42.85	30.60	22.95	38.86	17.55	28.23	21.81
17	E2a_E3a	KnownJunction	1	44.75	74.72	23.74	34.73	43.80	52.87	25.04	35.73	53.04	25.12	88.18	77.58	52.27	63.81	9.64	37.85	55.45	35.07	28.71	77.53	17.30	51.01	30.30
18	E3_Ab	NovelBoundary	1	38.08	78.67	20.70	37.96	47.88	44.29	48.27	28.96	42.51	20.71	86.60	60.62	53.24	75.81	21.39	46.48	33.75	24.83	30.49	57.27	18.84	41.21	44.64
19	ER3a	ExonRegion	1	35.77	78.80	21.93	39.52	48.30	54.37	38.39	33.10	50.33	26.09	105.83	66.89	48.78	78.69	13.93	51.71	58.26	38.34	39.82	73.30	22.92	51.78	39.79
20	ER3b	ExonRegion	0	36.78	72.29	20.67	32.63	54.52	67.64	59.40	29.81	51.06	27.01	102.41	94.76	34.78	81.73	45.93	57.70	52.88	38.73	34.80	59.65	21.83	33.45	31.47
21	E3a_E4a	KnownJunction	0	32.60	50.52	22.06	17.65	56.20	74.05	68.32	23.78	46.70	26.97	84.97	56.27	6.33	59.16	70.96	58.45	51.71	31.42	21.55	32.34	21.31	16.72	21.17
22	E3a_E4b	KnownJunction	0	0.00	3.16	0.00	1.70	0.00	6.98	2.08	4.03	3.36	4.16	2.58	0.00	6.66	9.24	0.00	7.95	0.00	1.62	0.00	0.00	0.00	0.00	0.00
23	ER4a	ExonRegion	0	28.08	34.57	22.88	31.81	57.75	66.91	55.97	23.94	44.21	23.34	66.24	68.11	22.61	72.33	46.16	52.91	45.36	37.30	25.10	52.24	37.55	36.41	41.08
24	E4_Ab	KnownBoundary	0	52.45	62.69	38.41	31.93	61.38	73.37	55.12	26.04	46.09	20.25	93.39	74.57	60.39	65.69	42.03	59.04	43.76	46.80	28.05	63.28	46.95	49.29	59.84
25	ER4b	ExonRegion	0	37.06	80.08	28.97	22.24	38.34	70.29	46.76	21.72	55.30	34.99	83.90	88.30	57.70	86.86	47.10	68.50	71.44	60.28	47.87	61.76	40.60	50.16	33.47
26	E4_Da	NovelBoundary	0	0.00	0.00	0.00	1.80	12.73	0.00	5.83	2.05	0.00	0.00	4.69	6.30	19.97	0.00	4.45	3.59	0.00	1.91	0.00	14.19	6.30	0.00	4.35
27	E4a_E5a	KnownJunction	1	32.01	116.56	31.37	21.21	44.14	57.41	44.07	33.76	57.29	29.95	96.92	53.12	39.77	77.82	64.03	28.11	82.66	53.35	24.75	63.73	26.13	40.23	46.10
28	E5_Aa	NovelBoundary	0	22.82	12.17	1.60	2.06	10.78	7.44	2.12	1.89	1.59	8.27	9.74	6.15	13.64	2.35	0.00	0.00	12.25	3.81	0.00	5.94	5.56	5.20	0.00
29	ER5a	ExonRegion	0	54.94	80.02	31.65	48.46	80.86	132.21	77.35	47.16	60.52	45.04	82.20	81.20	68.33	71.73	41.05	51.47	69.39	34.33	36.53	66.10	21.17	59.44	43.63
30	E5_Da	NovelBoundary	0	3.70	12.43	6.09	3.70	7.64	0.00	12.06	11.46	2.66	7.39	2.42	12.60	0.00	4.89	9.64	8.63	3.55	10.03	4.80	36.69	0.00	2.57	0.00
31	E5a_E7a	KnownJunction	0	43.71	51.50	14.16	54.51	93.72	177.91	62.53	36.93	88.08	48.54	106.61	95.73	68.18	58.21	31.89	25.12	72.93	12.27	26.73	45.06	19.65	64.36	51.47
32	I5	Intron	0	3.85	18.36	6.14	4.40	4.68	4.49	8.80	4.69	4.89	5.62	2.43	10.74	5.58	7.87	5.54	4.16	3.69	3.03	2.45	18.75	0.46	6.56	1.03
33	I5_AR1	ActiveIntronRegion	0	4.80	16.61	7.91	4.83	4.70	5.67	10.79	5.26	4.11	5.43	2.90	11.19	4.65	10.81	6.62	5.45	4.52	3.76	3.58	19.76	0.76	7.13	1.35
34	I5_SR1	SilentIntronRegion	0	2.36	21.17	3.36	3.75	4.66	2.64	5.70	3.79	6.15	5.94	1.71	10.08	7.06	3.28	3.86	2.14	2.40	1.90	0.69	17.25	0.00	5.68	0.53
35	E6_Aa	NovelBoundary	0	6.45	2.50	4.14	6.79	0.00	5.79	7.55	16.84	8.56	6.04	2.42	12.60	0.00	9.71	4.45	4.36	3.83	28.64	3.95	17.51	0.00	0.00	8.62
36	ER6a	ExonRegion	0	2.53	9.69	3.28	2.46	3.17	2.17	1.68	0.00	0.14	1.04	3.44	6.90	9.22	4.83	7.29	5.32	1.96	5.99	0.00	10.24	0.00	1.31	1.74
37	E6_Da	NovelBoundary	0	7.19	31.24	11.32	18.58	12.14	20.61	19.52	19.30	9.66	1.34	7.42	17.56	8.28	2.47	0.00	3.42	4.11	6.43	9.41	24.22	6.05	6.25	12.21
38	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	I6	Intron	0	4.68	18.20	11.25	8.02	10.04	8.47	13.25	7.44	8.32	7.08	3.16	3.09	1.65	3.27	2.68	4.58	2.86	2.04	3.68	12.69	1.70	3.01	0.85
40	I6_AR1	ActiveIntronRegion	0	3.84	17.49	11.30	7.42	4.52	7.16	11.31	6.89	7.63	5.50	3.01	2.23	1.94	3.68	2.71	4.51	1.55	1.49	2.30	9.46	1.38	2.81	0.46
41	I6_SR1	SilentIntronRegion	0	9.00	27.98	7.97	14.18	24.08	8.40	16.46	7.94	14.99	11.98	3.03	7.67	1.01	3.02	1.73	4.40	4.26	0.58	11.09	20.66	1.95	1.85	3.79
42	I6_AR2	ActiveIntronRegion	0	4.20	13.97	13.29	5.72	15.69	12.04	16.42	8.60	5.97	8.16	3.68	2.44	1.29	2.38	3.23	4.89	5.43	4.41	2.62	16.21	2.38	4.28	0.00
43	E7_Aa	NovelBoundary	0	10.82	27.03	14.69	20.61	29.12	34.87	11.84	22.88	13.22	9.97	2.68	6.30	0.00	4.94	0.00	4.36	0.00	1.99	30.40	15.40	0.00	5.76	4.35
44	ER7a	ExonRegion	0	44.12	59.08	30.24	46.48	106.03	141.73	62.16	42.33	66.99	43.33	101.98	100.83	71.22	61.77	27.68	35.41	64.12	12.46	26.24	43.38	19.35	61.02	41.31
45	E7_Da	KnownBoundary	0	83.20	88.60	58.69	60.20	155.69	145.83	113.76	70.77	71.09	42.09	87.97	94.23	93.01	68.93	25.96	39.14	47.41	18.94	26.45	47.49	19.40	49.72	70.77
46	ER7b	ExonRegion	0	59.10	93.30	54.23	66.73	109.65	129.13	82.73	66.31	82.19	56.11	87.53	112.59	66.58	48.52	38.52	44.12	49.63	23.05	32.58	44.11	21.62	67.40	42.57
47	E7_Db	KnownBoundary	0	116.24	121.62	98.40	109.44	225.30	258.26	128.69	95.66	107.09	59.77	119.87	149.30	113.30	66.34	96.67	74.85	29.36	22.59	43.77	77.53	8.90	101.16	44.82
48	ER7c	ExonRegion	0	51.70	90.77	60.72	65.45	108.98	127.04	80.85	70.11	63.79	44.34	41.82	106.68	63.70	32.87	43.43	22.66	19.32	12.00	18.19	33.73	7.07	54.93	19.74
49	E7_Dc	KnownBoundary	0	60.97	63.80	54.34	68.36	103.99	100.79	72.96	53.85	38.63	23.32	19.69	26.86	39.61	19.31	35.48	8.29	8.51	8.87	13.37	22.75	5.62	48.25	7.60
50	ER7d	ExonRegion	0	59.26	73.68	49.04	41.28	52.23	46.36	28.35	28.44	22.62	16.64	26.76	38.90	24.02	13.97	25.06	21.98	16.03	9.85	12.93	16.29	11.40	22.08	8.24