Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ACSL5 Gene 0 128.35 2.18 9.59 13.72 56.76 21.28 16.00 24.62 25.71 4.47 170.95 156.89 150.47 211.76 172.77 213.77 140.01 0.56 0.65 0.92 1.43 3.69 2.23 2 354655 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 479936 Transcript 0 2.59 0.00 0.00 0.00 2.59 1.72 0.00 0.72 0.00 0.00 4.49 0.00 0.00 7.70 0.00 1.92 3.09 0.00 0.00 0.00 0.00 0.00 0.00 4 393081 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 369410 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 433418 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 1.77 0.00 0.00 0.00 6.49 77.05 79.24 3.93 13.93 0.00 0.00 0.00 0.00 0.00 0.00 7 356116 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 354273 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 495539 Transcript 0 0.00 0.00 0.00 0.00 3.99 2.21 0.00 0.00 0.00 0.00 2.37 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 10 467340 Transcript 0 37.61 0.00 0.56 3.33 19.27 13.16 5.69 5.58 2.19 0.06 43.70 76.00 69.21 32.02 29.84 39.40 30.73 0.00 0.00 0.00 0.03 0.03 2.74 11 496328 Transcript 0 23.76 4.91 3.24 1.85 10.07 6.76 4.77 3.63 6.02 1.83 7.71 8.95 5.93 18.40 16.36 15.10 4.43 1.34 2.71 0.87 0.64 1.35 2.90 12 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.06 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 0 2.59 0.00 0.00 0.00 2.59 1.72 0.00 0.72 0.00 0.00 4.49 0.00 0.00 7.70 0.00 1.92 3.09 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2b ExonRegion 0 4.45 0.00 0.00 0.00 0.70 0.82 1.23 1.80 1.65 0.00 5.72 4.77 12.14 13.43 7.28 11.51 6.43 0.00 0.00 0.00 0.00 1.00 0.00 16 E2a_E4a KnownJunction 0 10.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 12.69 12.45 19.64 17.13 5.44 4.36 12.81 0.00 0.00 0.00 0.00 3.12 0.00 17 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3b ExonRegion 1 20.62 0.42 0.86 4.33 14.52 13.90 6.37 6.99 16.22 1.62 188.59 12.76 18.23 151.53 85.55 287.25 177.41 0.00 0.00 0.00 0.90 0.94 3.89 19 E3a_E4a KnownJunction 1 6.74 0.00 2.84 13.55 4.33 0.00 2.25 14.54 25.93 2.90 111.71 48.47 86.84 388.55 247.23 548.40 125.67 0.00 0.00 0.00 0.00 2.51 4.35 20 ER4a ExonRegion 0 25.58 0.16 0.85 3.87 37.95 24.61 12.04 11.50 22.16 2.91 171.77 105.80 168.21 255.16 131.37 411.00 176.21 0.00 0.00 0.00 0.00 3.02 4.48 21 E4a_E5a KnownJunction 1 53.64 5.06 0.00 1.73 7.72 18.57 2.25 10.64 18.40 2.34 197.37 220.72 193.33 314.03 104.09 268.56 240.86 0.00 0.00 0.00 0.00 0.00 0.00 22 ER5a ExonRegion 0 52.91 3.19 2.14 6.34 15.51 21.11 7.76 13.65 24.24 3.86 268.85 173.89 239.58 394.62 161.43 276.76 255.96 0.00 0.00 0.00 0.00 5.83 0.00 23 E5a_E6a KnownJunction 0 65.27 3.22 1.83 2.66 32.17 45.60 10.07 16.51 19.91 3.76 260.07 202.57 295.44 328.39 231.91 298.47 250.96 0.00 0.00 0.00 0.00 8.27 0.00 24 ER6a ExonRegion 0 51.74 0.56 1.51 4.59 23.51 19.07 4.20 19.62 30.44 5.81 252.79 247.78 351.61 325.57 165.19 308.64 208.62 0.00 0.00 0.00 1.66 3.65 0.00 25 E6a_E7a KnownJunction 0 95.65 0.00 1.83 7.09 31.75 9.71 6.36 27.23 42.77 5.00 331.08 315.85 339.59 412.68 173.44 449.28 244.32 0.00 0.00 0.00 0.00 2.39 0.00 26 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER7a ExonRegion 0 68.10 1.77 8.31 9.81 37.64 7.98 8.54 25.49 44.21 5.94 354.38 258.45 283.61 453.22 229.80 473.65 314.10 0.00 0.00 0.00 1.86 7.29 1.47 28 E7a_E8a KnownJunction 0 77.42 2.89 19.46 8.36 32.17 2.44 4.46 20.66 41.00 3.68 255.80 192.36 241.06 386.19 206.32 395.88 235.16 0.00 0.00 0.00 5.56 7.47 0.00 29 ER8a ExonRegion 0 55.39 0.65 8.10 8.38 34.36 15.22 8.98 25.77 37.00 4.82 299.35 223.27 273.38 334.20 197.66 317.69 236.01 0.00 0.00 0.00 2.64 4.19 0.00 30 E8a_E9a KnownJunction 0 67.94 3.29 2.63 6.16 50.59 44.80 6.62 23.12 36.49 3.63 358.67 422.09 344.13 425.63 256.51 471.16 256.19 0.00 0.00 0.00 0.00 9.19 4.01 31 Ix Intron 0 6.87 0.00 0.99 1.10 5.79 0.99 2.62 0.93 1.66 0.62 11.84 34.61 25.41 11.87 5.63 11.25 16.66 0.00 0.00 0.00 0.00 0.00 0.00 32 Ix_AR1 ActiveIntronRegion 0 4.87 0.00 1.11 0.86 6.64 0.80 2.24 0.76 2.23 0.84 11.68 37.81 22.22 11.09 5.48 9.24 16.33 0.00 0.00 0.00 0.00 0.00 0.00 33 Ix_SR1 SilentIntronRegion 0 10.14 0.00 0.81 1.50 4.54 1.31 3.28 1.21 0.78 0.27 12.32 30.19 30.89 13.32 5.96 14.62 17.47 0.00 0.00 0.00 0.00 0.00 0.00 34 E9_Ab NovelBoundary 0 80.83 0.00 3.43 8.59 33.11 16.64 15.06 11.13 29.46 1.21 236.17 225.37 302.58 334.39 248.59 344.18 212.34 0.00 0.00 0.00 3.15 0.00 0.00 35 ER9a ExonRegion 0 65.61 2.56 2.50 6.86 38.06 24.45 11.92 17.22 32.20 2.38 347.28 356.78 330.73 400.68 254.45 444.83 264.19 0.00 0.00 0.00 2.04 6.17 0.00 36 ER9b ExonRegion 0 57.83 3.38 8.63 7.45 42.53 26.16 12.22 25.26 37.05 2.59 306.29 225.56 247.24 360.58 262.47 402.16 202.77 0.00 0.00 0.00 1.23 2.48 1.08 37 E9a_E10a KnownJunction 0 35.64 0.00 0.00 5.99 57.81 34.98 4.46 13.64 23.58 5.00 289.28 207.22 195.44 369.95 282.22 421.34 146.70 0.00 0.00 0.00 0.00 8.08 0.00 38 I9_SR1 SilentIntronRegion 0 17.75 0.00 1.08 3.34 3.40 3.65 4.33 6.95 8.91 1.38 28.87 29.89 36.51 19.19 12.82 26.65 18.53 0.00 0.00 0.00 0.00 0.58 0.00 39 I9_AR2 ActiveIntronRegion 0 29.35 0.00 2.79 2.21 10.34 1.59 5.68 5.73 6.30 2.46 33.64 54.86 30.49 26.94 18.36 32.77 17.15 0.00 0.00 0.00 0.00 0.64 0.00 40 I9_SR2 SilentIntronRegion 1 21.78 0.86 1.12 0.21 5.04 1.53 3.98 3.80 2.85 0.87 38.13 31.84 21.74 25.95 17.48 34.98 24.22 0.00 0.00 0.00 0.00 0.88 0.00 41 E10_Aa NovelBoundary 0 63.79 0.00 5.47 0.00 0.00 8.69 3.89 2.55 4.98 0.00 17.85 30.01 51.46 64.98 24.11 30.93 7.85 0.00 0.00 0.00 0.00 2.88 0.00 42 ER10a ExonRegion 0 32.00 0.43 3.19 6.69 49.46 22.67 11.27 15.71 23.21 5.56 295.97 227.76 188.74 299.63 237.73 344.68 188.85 0.00 0.00 0.00 3.01 5.43 2.94 43 E10a_E11a KnownJunction 0 69.64 2.50 3.34 6.09 43.21 10.05 18.81 11.17 19.13 3.28 251.12 223.87 207.62 228.91 259.60 282.15 214.77 0.00 0.00 0.00 4.88 2.45 3.76 44 ER11a ExonRegion 0 62.60 1.72 10.60 8.31 41.78 12.38 6.98 19.15 31.04 3.79 278.52 251.28 269.05 278.47 259.22 334.76 250.61 0.18 0.00 0.00 5.51 2.92 0.73 45 E11a_E12b KnownJunction 0 94.61 0.00 13.66 11.39 48.73 25.16 0.00 26.86 47.34 4.32 275.07 233.78 315.56 353.76 465.30 481.75 231.14 0.00 0.00 0.00 3.15 3.12 0.00 46 E11a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 3.99 2.21 0.00 0.00 0.00 0.00 2.37 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 47 I11 Intron 0 33.81 0.14 0.25 2.91 12.24 5.38 4.97 4.75 4.02 0.47 37.62 43.68 60.99 36.36 14.77 43.22 25.69 0.00 0.00 0.00 0.00 0.28 0.20 48 I11_SR1 SilentIntronRegion 0 33.90 0.14 0.25 2.92 12.27 5.40 4.98 4.76 4.03 0.47 37.71 43.79 61.15 36.46 14.81 43.33 25.76 0.00 0.00 0.00 0.00 0.29 0.20 49 E12_Aa NovelBoundary 1 37.49 0.00 0.00 1.27 14.43 5.22 5.83 9.61 10.76 0.00 31.48 96.33 92.53 37.50 42.03 60.92 4.77 0.00 0.00 0.00 0.00 0.00 0.00 50 ER12a ExonRegion 0 37.61 0.00 0.56 3.33 19.27 13.16 5.69 5.58 2.19 0.06 43.70 76.00 69.21 32.02 29.84 39.40 30.73 0.00 0.00 0.00 0.03 0.03 2.74 51 E12_Ab KnownBoundary 0 46.30 0.00 2.48 7.03 30.48 5.79 13.07 8.13 4.77 0.00 55.80 72.17 91.23 53.33 14.71 38.54 30.01 0.00 0.00 0.00 0.00 0.00 8.28 52 ER12b ExonRegion 0 126.79 0.00 10.58 12.55 75.69 25.30 19.68 47.76 44.75 4.40 367.04 274.89 286.22 418.84 341.67 430.10 252.77 0.00 0.00 0.00 3.74 1.71 1.33 53 E12a_E13a KnownJunction 0 159.51 0.00 8.72 14.42 64.26 31.18 14.75 31.59 46.90 3.20 454.75 279.69 349.65 445.17 372.58 437.32 286.21 0.00 0.00 0.00 5.31 5.57 0.00 54 ER13a ExonRegion 0 118.36 1.36 8.78 15.64 46.14 25.44 11.86 26.17 30.23 4.97 318.43 194.16 255.01 323.72 247.24 329.64 245.66 1.68 0.00 0.00 3.36 5.58 0.00 55 E13a_E14a KnownJunction 0 78.16 5.06 9.25 20.11 26.23 10.05 8.44 22.14 21.73 1.34 135.40 154.10 172.23 192.77 159.10 141.42 151.85 0.00 0.00 0.00 3.09 2.69 0.00 56 ER14a ExonRegion 0 116.19 1.52 7.87 19.58 71.02 25.43 19.04 40.63 34.21 6.07 297.12 245.56 263.16 404.25 259.03 367.55 218.30 0.00 0.00 0.00 0.52 2.73 1.11 57 E14a_E15a KnownJunction 0 140.84 0.00 9.96 9.96 87.01 5.79 21.86 20.37 28.53 7.49 237.11 267.54 313.45 368.89 250.70 340.68 214.49 0.00 0.00 0.00 0.00 11.33 0.00 58 ER15a ExonRegion 0 117.63 2.30 6.44 13.25 64.06 27.14 18.65 24.42 29.94 7.59 259.90 250.11 296.20 380.71 262.57 323.52 227.96 0.00 0.00 0.00 0.83 5.34 2.22 59 E15a_E16a KnownJunction 0 123.28 0.00 8.43 12.15 18.85 20.39 7.73 18.28 33.51 6.12 192.05 233.03 250.31 378.31 268.74 305.39 217.39 0.00 0.00 0.00 0.00 0.00 0.00 60 ER16a ExonRegion 0 106.83 2.41 13.69 13.25 43.56 23.41 13.68 29.66 30.21 4.13 268.15 213.59 169.19 337.29 276.55 264.14 205.29 0.00 0.00 0.00 2.42 4.55 4.64 61 E16b_E17a KnownJunction 0 126.76 6.38 10.20 7.79 75.30 40.26 16.78 38.24 19.39 4.11 273.75 256.88 165.74 362.94 284.57 250.28 201.87 0.00 0.00 0.00 0.00 4.96 0.00 62 ER16b ExonRegion 0 97.36 4.07 9.80 9.99 67.79 32.40 11.47 32.84 23.06 3.44 273.18 229.46 164.15 352.43 250.47 239.75 204.66 0.00 0.00 0.00 0.00 4.17 2.94 63 ER17a ExonRegion 0 126.43 4.01 10.88 11.46 54.85 36.14 16.43 32.33 23.43 5.13 267.14 214.69 182.22 347.94 273.14 281.13 223.00 0.00 0.00 1.75 0.00 3.80 1.81 64 E17_Da KnownBoundary 0 172.10 9.01 14.72 15.28 56.96 41.91 22.52 26.37 26.33 6.98 270.49 215.92 189.76 377.07 370.73 350.85 243.76 0.00 0.00 3.26 2.47 3.12 4.18 65 ER17b ExonRegion 0 140.23 3.75 13.35 15.17 45.62 23.32 18.47 32.93 28.79 5.65 253.16 256.44 191.57 352.52 338.63 355.82 202.88 0.09 0.00 1.25 1.07 1.87 3.16 66 E17b_E18a KnownJunction 0 205.96 0.00 15.05 19.31 46.43 16.07 16.30 39.47 33.97 6.34 185.05 250.88 192.84 336.34 385.32 333.67 175.69 0.00 0.00 0.00 3.09 0.00 3.41 67 ER18a ExonRegion 0 147.13 0.35 17.82 20.37 39.22 20.96 23.45 36.05 36.56 5.96 227.92 227.73 243.61 348.68 350.89 378.22 175.61 2.80 9.74 0.00 4.79 0.95 7.22 68 E18_Ab KnownBoundary 0 189.00 0.00 23.65 28.27 44.48 35.49 31.75 41.36 47.48 9.48 260.01 290.79 280.18 355.82 410.41 429.12 191.87 6.43 19.01 0.00 5.87 5.45 14.94 69 ER18b ExonRegion 0 163.91 1.69 14.95 17.59 66.70 36.71 22.19 33.77 43.14 6.71 296.56 173.66 186.47 406.84 385.11 390.89 211.01 2.53 5.72 0.00 2.90 4.51 9.84 70 E18a_E19a KnownJunction 1 190.26 0.00 18.07 15.85 97.28 40.37 31.58 40.29 39.76 7.33 345.09 104.13 183.43 450.82 302.49 283.00 254.98 0.00 0.00 0.00 2.72 5.20 7.77 71 E19_Aa NovelBoundary 0 3.11 0.00 1.63 1.70 0.00 5.11 17.36 4.27 7.84 2.93 0.00 0.00 15.42 2.24 0.00 3.76 17.67 3.65 0.00 9.08 8.53 0.00 0.00 72 ER19a ExonRegion 0 146.27 3.55 23.70 19.27 59.39 32.02 20.01 33.51 41.22 5.56 266.74 182.73 166.48 384.32 317.10 304.07 220.37 2.37 4.17 1.85 6.50 4.84 4.19 73 E19a_E20a KnownJunction 0 194.85 0.00 18.80 26.57 76.83 7.33 28.26 30.03 46.56 5.00 227.11 250.58 224.01 290.78 356.51 324.02 253.39 0.00 0.00 0.00 0.00 2.33 4.35 74 E20_Aa NovelBoundary 0 30.89 0.00 0.00 1.83 13.84 4.32 3.93 8.91 11.17 6.12 2.63 6.30 6.82 0.00 5.19 3.59 4.21 2.28 0.00 9.52 3.15 8.88 3.50 75 ER20a ExonRegion 0 211.24 4.32 14.59 24.46 106.86 39.77 26.44 35.28 44.06 8.89 309.91 252.01 240.95 420.60 384.40 334.86 259.92 0.00 3.38 2.26 0.77 9.38 4.49 76 E20_Da NovelBoundary 0 13.48 0.00 1.18 3.66 7.13 11.53 16.08 11.83 10.04 3.76 9.95 6.30 8.28 9.89 8.90 12.73 4.11 3.94 3.48 4.92 0.00 8.76 4.01 77 E20a_E21a KnownJunction 0 199.00 0.00 10.94 15.38 97.45 33.62 32.64 44.32 28.36 4.35 200.00 240.08 204.53 284.30 292.60 184.05 150.72 0.00 0.00 0.00 0.00 5.27 0.00 78 ER21a ExonRegion 0 170.32 4.13 19.81 22.90 67.13 39.43 32.06 39.09 44.33 9.02 236.04 268.21 236.34 284.41 331.08 279.38 197.44 2.23 2.94 0.00 1.75 7.05 2.71 79 E21_Da KnownBoundary 0 56.53 2.76 4.17 5.49 7.30 0.00 5.26 5.09 12.73 2.58 9.95 6.15 6.49 16.83 27.20 19.23 16.55 3.77 7.53 0.00 3.15 2.39 3.41 80 E21a_E22a KnownJunction 0 267.08 2.57 22.89 35.23 99.58 37.48 33.03 49.37 47.40 13.40 254.22 387.73 279.36 363.12 502.26 367.77 194.67 0.00 0.00 0.00 0.00 13.84 4.10 81 E21a_E23a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 1.77 0.00 0.00 0.00 6.49 77.05 79.24 3.93 13.93 0.00 0.00 0.00 0.00 0.00 0.00 82 ER21b ExonRegion 0 23.76 4.91 3.24 1.85 10.07 6.76 4.77 3.63 6.02 1.83 7.71 8.95 5.93 18.40 16.36 15.10 4.43 1.34 2.71 0.87 0.64 1.35 2.90 83 E21_Db NovelBoundary 0 38.38 3.35 2.31 3.70 25.64 5.28 17.97 13.14 10.19 1.67 17.16 24.31 27.27 29.20 27.44 15.81 12.34 0.00 0.00 5.18 0.00 2.45 11.35 84 E22_Aa NovelBoundary 0 24.89 2.89 1.77 2.76 8.06 5.11 5.96 17.83 4.77 3.57 12.85 7.65 6.82 19.60 27.44 4.36 20.48 0.00 0.00 3.13 2.66 3.06 3.76 85 ER22a ExonRegion 0 198.42 1.67 18.99 33.69 104.50 45.41 30.63 55.53 40.93 6.88 302.90 320.80 235.35 285.10 379.86 318.14 217.40 0.00 0.00 0.00 1.50 4.31 0.69 86 E22_Da NovelBoundary 0 18.08 5.79 2.96 9.09 7.98 2.90 16.08 16.47 9.52 1.13 9.69 12.60 0.00 22.13 53.03 8.20 9.35 1.87 0.00 0.00 0.00 0.00 3.84 87 E22a_E23a KnownJunction 0 245.23 0.00 22.83 33.36 137.61 27.31 37.45 65.31 40.74 4.97 258.28 311.80 300.95 236.98 369.62 253.27 170.73 0.00 0.00 0.00 0.00 8.63 0.00 88 I22_SR1 SilentIntronRegion 0 26.18 5.57 6.15 5.74 15.10 3.26 4.07 7.02 5.58 2.97 15.94 14.20 18.43 11.51 17.50 17.04 5.44 0.62 0.00 4.31 0.99 0.93 1.97 89 E23_Aa NovelBoundary 0 25.86 6.38 13.96 5.23 53.90 5.28 7.68 8.87 4.51 4.14 6.74 35.41 27.76 12.77 18.79 21.19 8.23 4.19 0.00 6.01 0.00 0.00 0.00 90 ER23a ExonRegion 1 279.62 3.22 17.33 25.71 109.47 28.03 28.08 39.01 30.71 6.50 111.55 188.92 137.84 136.57 162.27 126.97 92.43 1.01 0.14 2.62 1.75 5.00 2.46 91 ER23b ExonRegion 0 3.53 0.00 0.00 0.00 0.89 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 1.62 1.93 0.00 3.30 0.00 0.00 0.00 0.00 0.00 0.00 92 ER23c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00