Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C10orf82 Gene 0 11.15 11.13 40.24 34.70 14.80 14.74 30.76 17.62 25.98 5.37 1.18 4.98 7.14 3.21 5.55 5.96 5.48 41.61 13.26 16.48 3.60 2.18 6.76 2 388884 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 369210 Transcript 0 0.98 0.78 6.44 7.47 4.07 4.50 3.88 3.31 4.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.17 0.91 1.80 0.00 0.29 0.00 4 467153 Transcript 0 21.19 20.37 48.10 39.52 19.12 21.04 42.20 27.44 32.88 13.98 3.14 13.20 18.93 8.52 14.72 15.80 14.54 64.44 23.77 26.10 9.37 5.07 17.76 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 0.00 0.13 2.45 0.89 0.50 0.00 0.00 0.49 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.50 1.20 0.00 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 1.48 2.22 38.32 29.92 17.11 10.39 14.70 5.29 12.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.07 9.60 20.15 0.00 0.00 0.00 9 E2a_E3a KnownJunction 0 7.56 3.35 58.57 60.23 26.49 9.65 21.37 9.61 26.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72.34 0.00 20.39 0.00 0.00 0.00 10 ER3a ExonRegion 0 7.21 9.27 73.59 50.31 14.82 21.14 36.06 18.14 44.17 0.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69.46 13.45 16.29 0.00 1.69 0.44 11 E3_Da KnownBoundary 0 35.93 5.85 60.61 68.29 3.48 8.40 18.42 9.32 39.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.96 8.09 19.43 0.00 3.12 4.18 12 E3a_E3b KnownJunction 0 6.59 2.43 1.83 3.30 0.00 0.00 7.64 4.35 5.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.21 0.00 0.00 0.00 0.00 0.00 13 ER3b ExonRegion 0 21.19 20.37 48.10 39.52 19.12 21.04 42.20 27.44 32.88 13.98 3.14 13.20 18.93 8.52 14.72 15.80 14.54 64.44 23.77 26.10 9.37 5.07 17.76 14 E3_Ab KnownBoundary 0 3.78 15.52 82.52 58.43 30.14 2.90 54.14 23.91 24.80 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.58 9.22 8.88 0.00 0.00 0.00 15 ER3c ExonRegion 0 9.95 11.24 55.72 43.84 11.64 8.22 38.80 14.91 28.67 0.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.90 10.09 13.54 0.60 0.00 0.00 16 E3_Db NovelBoundary 0 20.97 12.37 69.63 32.76 0.00 14.48 16.34 9.28 6.16 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.80 0.00 11.82 2.59 0.00 0.00 17 E3b_E4a KnownJunction 0 3.70 0.00 35.57 26.04 15.70 5.79 38.91 16.96 13.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.64 4.80 20.52 0.00 0.00 0.00 18 E3b_E4b KnownJunction 0 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 I3 Intron 0 4.47 6.02 40.65 19.17 3.77 3.88 8.77 2.54 6.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.65 2.69 4.80 0.31 0.00 0.00 20 I3_AR1 ActiveIntronRegion 0 4.64 6.24 42.16 19.88 3.91 4.02 9.09 2.63 7.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.09 2.79 4.97 0.32 0.00 0.00 21 ER4a ExonRegion 0 4.82 2.37 21.01 36.37 10.18 11.60 34.18 15.17 22.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.46 5.75 15.24 0.00 0.00 0.00 22 E4a_E4c KnownJunction 0 10.52 9.41 25.52 46.88 27.59 17.15 25.39 8.54 22.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.02 12.61 8.25 0.00 0.00 0.00 23 ER4b ExonRegion 0 1.19 1.19 5.93 7.82 0.59 1.63 2.26 0.70 2.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 1.40 1.85 0.00 0.86 0.00 24 E4_Ac KnownBoundary 0 3.26 5.85 4.61 3.73 4.33 0.00 2.25 4.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.89 0.00 0.00 0.00 0.00 0.00 25 ER4c ExonRegion 0 5.57 7.51 23.22 32.00 12.78 9.99 22.09 10.40 19.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.80 3.82 10.20 0.00 0.00 0.00 26 E4_Db KnownBoundary 0 10.96 0.00 16.03 24.34 29.46 0.00 29.41 7.93 14.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.55 0.00 6.14 0.00 0.00 0.00 27 ER4d ExonRegion 0 3.76 2.30 20.47 25.94 21.90 10.09 19.05 13.83 15.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.87 5.12 5.97 0.00 0.00 0.00 28 E4_Dc KnownBoundary 0 6.08 0.00 17.89 33.43 11.29 13.74 12.45 14.09 15.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.72 9.41 8.76 0.00 0.00 0.00 29 ER4e ExonRegion 0 1.74 1.15 11.65 14.58 11.62 11.88 9.37 9.22 9.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.45 1.34 3.55 0.00 0.00 0.00