Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PDZD8 Gene 0 12.89 44.95 23.89 22.55 32.84 101.87 41.08 31.67 35.92 25.24 34.01 61.02 86.31 84.23 46.08 31.20 53.41 38.34 25.32 63.06 34.79 73.92 44.19 2 334464 Transcript 0 6.48 27.86 12.88 13.07 15.79 103.10 38.94 31.31 44.24 32.34 58.59 81.50 116.80 136.37 48.30 41.79 106.07 57.19 29.70 95.83 46.97 69.95 60.50 3 489491 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 0.00 4 489302 Transcript 0 0.61 5.46 1.07 0.90 1.61 7.42 6.09 4.50 3.63 3.40 7.62 9.39 20.66 17.14 5.47 5.08 13.83 5.67 2.68 10.02 6.27 9.06 5.89 5 482496 Transcript 0 0.00 0.00 0.00 0.00 1.90 1.30 1.93 0.00 0.05 0.01 0.00 1.44 2.64 0.05 1.37 0.00 0.00 0.00 0.00 1.40 0.02 0.00 0.06 6 ER1a ExonRegion 0 0.98 3.85 4.84 3.07 2.86 27.66 6.44 7.71 12.90 11.92 27.99 8.19 13.44 76.33 28.50 24.56 39.46 50.42 16.43 40.80 43.60 22.07 25.22 7 E1_Ab KnownBoundary 0 0.00 18.55 4.32 8.76 8.49 101.31 35.37 15.28 40.16 36.26 39.64 18.01 44.80 158.40 44.38 49.13 44.51 79.51 22.02 119.46 83.96 47.58 57.11 8 ER1b ExonRegion 0 2.24 10.82 11.08 10.23 14.09 105.05 43.30 40.42 58.26 35.82 77.15 48.04 82.84 186.89 71.12 79.34 122.00 124.05 53.44 125.02 81.63 69.77 91.04 9 E1a_E2a KnownJunction 0 6.82 15.39 7.95 14.02 4.16 131.23 51.54 33.85 49.85 42.84 85.71 106.23 182.13 144.74 67.37 45.37 116.78 68.77 42.07 153.08 74.19 56.21 61.63 10 E1a_E3b NovelJunction 0 0.00 3.35 0.00 0.00 0.00 10.73 1.77 0.00 13.60 2.28 4.79 5.55 0.00 17.25 0.00 0.00 0.00 4.19 8.75 23.65 5.50 2.39 7.85 11 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 0.00 12 I1_AR1 ActiveIntronRegion 1 10.74 6.91 5.48 7.79 7.53 2.75 14.66 7.47 4.18 2.75 0.58 3.00 11.21 1.28 12.91 3.85 2.37 2.87 6.49 5.63 0.00 0.21 4.95 13 ER2a ExonRegion 0 3.75 24.37 14.10 12.17 18.43 125.77 40.88 31.44 63.30 40.94 75.38 105.35 182.34 175.77 50.24 60.09 147.55 68.29 40.09 119.36 66.38 77.53 74.87 14 E2a_E3b KnownJunction 1 2.82 47.16 7.45 5.49 8.66 122.54 50.52 47.97 60.99 40.70 81.65 132.94 143.66 230.56 48.09 60.75 194.20 85.81 30.87 118.44 37.75 118.43 109.44 15 ER3a ExonRegion 0 0.42 13.01 1.23 1.09 2.68 22.74 9.00 9.33 11.86 8.26 19.72 33.77 38.46 46.12 19.73 16.05 43.57 15.15 7.64 27.66 10.58 22.50 23.49 16 ER3b ExonRegion 0 2.99 36.35 23.29 16.78 31.14 163.84 48.03 49.90 69.47 46.69 86.66 151.15 210.32 202.86 63.26 74.62 167.50 82.17 52.03 130.41 59.69 110.41 101.89 17 E3a_E5a KnownJunction 0 6.82 47.69 28.95 23.27 29.20 298.58 66.33 48.39 63.40 47.76 100.87 240.68 250.63 210.49 90.74 81.09 186.35 81.46 35.30 140.43 63.88 140.59 109.09 18 I3_SR2 SilentIntronRegion 0 5.84 4.33 3.01 2.63 6.63 4.25 11.31 19.28 5.53 3.25 0.00 1.16 5.33 0.00 4.89 1.20 1.67 0.28 0.97 2.66 0.00 0.00 1.19 19 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 3.79 2.60 3.86 0.00 0.10 0.02 0.00 2.89 5.28 0.09 2.74 0.00 0.00 0.00 0.00 2.81 0.03 0.00 0.12 20 E4_Da NovelBoundary 0 0.00 3.29 0.00 3.00 0.00 0.00 17.44 0.00 4.83 1.45 2.11 0.00 27.27 0.00 0.00 0.00 8.70 0.00 0.00 2.43 0.00 0.00 0.00 21 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E5_Aa NovelBoundary 0 2.89 3.35 0.00 6.79 4.16 2.90 24.02 2.55 0.00 0.00 0.00 0.00 0.00 2.35 5.81 0.00 0.00 0.00 3.95 2.43 2.66 0.00 0.00 23 ER5a ExonRegion 0 6.80 34.08 25.06 19.92 28.35 166.28 65.15 53.92 63.10 44.55 82.34 191.77 216.20 202.89 70.52 84.92 143.44 116.34 51.83 141.16 119.14 131.35 115.75 24 E5a_E6a KnownJunction 0 0.00 3.35 1.80 0.00 0.00 2.38 8.30 2.38 0.00 1.10 2.68 0.00 21.91 4.89 0.00 0.00 0.00 0.00 0.00 0.00 6.12 6.25 0.00 25 E5a_E7a KnownJunction 1 17.93 55.85 17.86 14.82 31.24 183.53 47.34 55.24 62.79 50.96 87.92 103.68 136.03 157.51 70.34 49.56 183.45 110.43 46.21 161.26 165.13 124.98 91.34 26 I5_AR2 ActiveIntronRegion 0 14.87 11.99 4.36 9.20 12.05 10.69 16.44 9.42 7.40 3.39 1.86 3.90 20.50 4.46 6.91 3.63 3.40 2.09 2.40 2.93 0.39 4.00 3.35 27 I5_SR2 SilentIntronRegion 1 39.99 9.23 12.06 8.58 11.62 8.45 17.98 8.11 9.23 4.10 1.94 5.88 12.38 3.59 13.06 4.84 6.97 4.14 5.23 3.48 1.55 3.36 2.45 28 I5_AR3 ActiveIntronRegion 0 22.87 4.09 7.24 9.34 18.54 13.12 13.09 9.81 5.31 2.98 3.89 6.01 12.63 3.97 11.72 1.99 3.34 4.77 2.37 2.95 1.17 2.85 4.98 29 I5_AR4 ActiveIntronRegion 0 16.84 7.37 7.56 9.82 0.67 5.81 8.66 8.07 10.24 6.88 5.48 4.87 30.68 5.14 6.89 0.00 2.61 2.77 3.85 2.04 2.66 2.69 7.22 30 I5_AR5 ActiveIntronRegion 0 15.12 6.10 5.25 8.18 0.00 9.17 7.38 3.95 8.65 4.59 5.80 8.66 18.76 7.66 5.80 2.97 0.00 5.54 0.00 0.00 0.00 0.00 2.94 31 I5_AR6 ActiveIntronRegion 0 14.95 4.68 7.06 7.10 13.08 19.21 9.92 8.04 6.88 5.15 5.49 7.28 9.90 8.46 10.27 8.21 4.14 10.32 2.58 2.36 4.93 2.45 8.62 32 I5_SR3 SilentIntronRegion 0 26.87 5.97 7.15 7.82 19.11 19.93 19.61 7.40 8.26 3.34 3.92 4.41 8.68 3.51 6.22 2.83 9.21 8.99 2.73 8.83 5.98 1.53 6.36 33 E6_Aa NovelBoundary 0 0.00 2.96 1.42 7.59 0.00 2.50 19.25 6.78 5.35 5.16 7.00 21.01 6.98 6.65 0.00 0.00 0.00 1.78 4.24 6.52 2.41 5.94 12.12 34 ER6a ExonRegion 0 2.04 5.47 1.24 0.77 3.76 4.57 5.23 1.71 2.65 1.68 3.65 3.80 15.93 7.94 2.13 4.29 6.98 3.17 3.07 6.34 2.99 5.15 0.06 35 E6_Da NovelBoundary 0 6.67 6.71 1.66 8.42 25.72 5.28 18.81 1.56 9.09 1.26 0.00 0.00 13.47 2.30 0.00 4.36 0.00 1.82 0.00 2.36 0.00 2.82 3.33 36 E6a_E7a KnownJunction 0 0.00 0.00 0.00 1.73 0.00 0.00 1.81 4.56 0.00 2.55 4.42 0.00 6.33 9.59 0.00 0.00 4.77 4.35 0.00 6.07 5.37 2.33 0.00 37 E7_Aa NovelBoundary 0 10.15 3.22 5.06 3.40 4.33 29.87 20.98 2.55 8.48 4.00 0.00 0.00 0.00 14.19 0.00 0.00 7.95 2.57 0.00 2.62 17.30 2.33 4.35 38 ER7a ExonRegion 0 15.87 108.72 35.63 29.00 45.25 202.71 81.45 64.56 93.07 54.05 121.80 176.89 288.42 242.46 80.72 110.41 178.95 164.16 80.93 186.44 138.28 193.72 149.86 39 E7_Da KnownBoundary 0 56.45 164.38 56.53 54.47 55.69 290.63 151.70 103.38 114.35 84.45 147.88 226.87 472.21 291.13 112.99 166.20 228.05 204.95 88.38 257.59 125.16 389.45 213.75 40 ER7b ExonRegion 0 9.98 70.73 21.17 14.91 19.92 114.00 47.32 26.39 37.05 23.14 35.24 73.20 158.61 112.53 44.40 43.47 66.90 57.43 30.93 79.15 56.13 75.61 56.82 41 E7_Db KnownBoundary 0 3.78 6.25 1.48 0.00 0.00 10.85 4.24 0.00 1.50 1.67 4.79 13.35 6.33 5.12 0.00 0.00 13.37 4.31 0.00 2.62 3.09 3.06 0.00 42 ER7c ExonRegion 0 18.03 48.54 30.08 30.63 44.82 108.30 45.33 35.58 34.15 25.27 22.23 54.79 62.42 54.46 47.30 18.18 32.36 12.68 19.02 47.46 12.92 75.51 31.34 43 IG8 Intergenic 0 11.81 34.15 13.04 14.28 32.85 121.77 36.87 23.28 23.00 20.79 11.86 48.04 49.03 32.47 21.13 11.11 18.24 3.86 8.71 36.21 6.27 71.61 23.76 44 IG8_AR1 ActiveIntergenicRegion 0 11.84 34.23 13.07 14.31 32.92 122.03 36.94 23.33 23.05 20.83 11.89 48.15 49.14 32.54 21.17 11.14 18.27 3.87 8.73 36.29 6.28 71.77 23.81