Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	SMNDC1	Gene	0	77.51	125.27	78.02	68.31	116.57	77.27	111.25	75.47	51.09	51.09	159.52	222.68	145.42	128.21	133.93	88.06	99.53	27.70	37.02	59.76	34.53	112.66	38.66
2	369603	Transcript	0	63.87	95.12	72.57	61.60	99.51	67.86	93.00	68.41	44.18	46.85	108.91	172.38	104.00	79.92	113.01	50.19	54.07	14.09	22.32	45.59	10.24	95.84	22.17
3	471297	Transcript	0	2.92	3.67	2.65	2.41	3.53	5.22	8.66	5.17	3.86	1.75	20.54	14.56	4.30	16.12	6.73	13.16	13.35	2.91	4.52	5.79	6.12	6.60	3.65
4	460483	Transcript	0	17.69	16.77	15.83	3.22	12.79	6.16	17.28	20.93	7.86	4.06	20.14	32.35	22.04	18.18	11.57	17.05	24.05	9.12	28.59	12.10	9.04	8.68	10.35
5	369592	Transcript	0	0.01	0.00	0.00	0.17	0.22	0.31	0.00	0.00	0.31	0.29	0.48	3.58	0.00	0.48	0.37	1.85	0.83	0.15	0.27	0.00	0.92	0.17	1.01
6	477763	Transcript	0	1.69	1.76	1.83	0.39	0.60	1.47	3.94	0.87	2.44	1.00	1.67	6.04	4.14	2.46	0.55	1.24	0.44	0.39	0.33	1.04	0.54	1.57	0.44
7	ER1a	ExonRegion	0	0.00	1.60	0.00	0.00	0.00	5.11	2.93	0.00	0.00	0.00	0.00	2.47	1.34	2.67	0.00	0.00	2.12	0.00	0.00	0.00	2.05	0.00	0.00
8	E1_Ac	KnownBoundary	1	16.82	28.22	1.09	3.20	10.78	56.90	39.83	1.60	2.78	6.85	56.33	0.00	25.16	38.32	32.39	18.11	58.16	25.20	9.13	6.39	29.90	6.06	23.30
9	ER1b	ExonRegion	0	5.89	9.79	0.00	1.58	1.59	24.18	15.85	0.49	2.01	1.97	26.40	4.33	7.91	19.64	9.25	7.89	22.80	6.52	3.88	2.86	15.63	2.86	7.89
10	ER1c	ExonRegion	1	15.08	17.85	1.95	3.78	9.84	32.75	20.80	8.03	6.98	7.72	56.76	53.49	103.33	41.82	29.38	27.69	50.95	13.31	15.93	10.87	43.85	6.41	15.02
11	E1a_E3b	KnownJunction	1	32.45	5.72	5.97	3.00	25.64	15.16	15.55	22.14	12.73	19.64	118.56	0.00	12.66	102.01	33.01	40.59	69.10	31.96	13.46	24.03	64.50	7.53	10.76
12	ER2a	ExonRegion	0	0.01	0.00	0.00	0.34	0.45	0.62	0.00	0.00	0.62	0.57	0.97	0.85	0.00	0.96	0.74	0.11	1.66	0.31	0.53	0.00	1.84	0.35	2.02
13	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.30	0.00	0.00	0.00	3.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	1.69	1.76	1.83	0.39	0.60	1.47	3.94	0.87	2.44	1.00	1.67	6.04	4.14	2.46	0.55	1.24	0.44	0.39	0.33	1.04	0.54	1.57	0.44
15	E3_Ab	KnownBoundary	0	0.00	0.00	8.87	0.00	0.00	0.00	1.90	4.07	0.00	0.00	0.00	6.30	14.77	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.27	4.35
16	ER3b	ExonRegion	0	59.94	60.36	35.95	33.25	73.37	64.72	81.76	48.31	42.45	37.41	187.67	123.88	99.75	182.52	121.39	130.87	132.42	53.90	59.40	44.79	72.59	68.84	55.70
17	E3a_E4a	KnownJunction	0	3.78	5.99	1.71	1.96	3.90	4.77	15.77	8.58	4.37	1.67	30.53	12.15	0.00	22.54	9.77	7.78	11.97	0.00	4.80	5.50	5.93	5.51	0.00
18	E3a_E5b	KnownJunction	1	38.67	111.62	67.12	58.97	125.81	122.15	175.15	82.39	63.66	54.91	334.40	204.07	207.62	263.35	104.09	144.24	289.57	55.26	45.55	72.67	103.35	122.28	42.85
19	E4_Aa	NovelBoundary	0	14.22	5.33	1.60	3.43	4.16	0.00	10.42	0.00	7.55	3.98	17.27	25.21	39.93	7.00	0.00	21.79	11.41	17.37	8.38	10.99	6.05	0.00	0.00
20	ER4a	ExonRegion	0	6.00	3.85	4.97	3.08	4.34	9.56	9.73	7.06	4.56	3.00	31.15	33.72	7.80	25.71	11.09	27.12	25.42	8.75	8.11	12.79	12.90	5.99	2.69
21	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.79	0.00	2.42	0.00	0.00	0.00	0.00	7.26	0.00	0.00	0.00	0.00	0.00	2.82	4.35
22	E4a_E5b	NovelJunction	0	10.52	6.25	8.28	5.79	32.51	10.79	24.64	4.39	7.52	2.69	38.85	18.46	6.82	32.32	17.80	41.10	35.53	7.92	25.04	17.96	11.80	13.41	12.04
23	ER5a	ExonRegion	0	1.91	4.84	3.91	4.61	5.86	6.55	9.14	5.02	4.71	2.35	18.04	12.37	9.38	16.24	6.08	10.47	16.03	2.90	5.16	4.86	5.67	12.10	7.55
24	ER5b	ExonRegion	0	45.95	98.35	75.62	57.25	104.97	142.66	154.21	84.14	66.73	64.01	316.96	331.41	198.64	261.02	144.75	168.94	232.38	73.63	71.40	98.85	122.53	118.10	73.81
25	E5_Da	NovelBoundary	0	71.49	67.55	84.77	63.46	114.77	92.50	164.24	95.91	87.47	70.32	337.98	400.63	223.04	219.14	162.93	237.97	233.10	95.14	131.20	120.36	115.52	122.10	77.60
26	E5_Db	NovelBoundary	0	17.34	10.06	11.50	7.59	22.67	10.39	2.12	8.26	4.14	3.28	20.32	50.12	41.07	16.72	15.95	8.46	21.04	0.00	17.51	2.88	2.84	14.88	4.18
27	E5b_E6a	KnownJunction	0	10.45	12.76	10.56	0.00	4.33	2.95	12.06	15.07	3.24	2.26	2.16	18.76	6.82	0.00	4.45	7.35	7.57	5.51	24.09	5.75	3.15	3.12	8.62
28	E5b_E6b	KnownJunction	0	111.13	90.18	110.46	83.31	133.79	54.40	112.92	106.09	75.06	80.53	378.67	249.08	367.51	317.56	227.95	201.31	402.34	74.45	57.32	99.77	165.93	146.16	78.28
29	ER5c	ExonRegion	0	69.99	74.68	94.86	68.19	114.50	63.17	119.07	106.51	79.56	72.77	357.19	310.38	270.89	263.00	173.57	225.68	306.53	86.72	104.24	109.32	150.76	134.14	82.53
30	I5	Intron	0	16.72	6.46	16.93	9.94	22.51	15.90	25.80	16.14	9.32	11.74	20.41	38.18	25.99	26.75	13.41	18.63	17.57	4.12	4.65	9.50	2.08	9.86	6.31
31	I5_AR1	ActiveIntronRegion	0	15.16	3.86	13.34	8.31	20.33	13.67	25.15	15.05	12.10	12.99	18.36	38.00	21.14	25.00	12.97	18.24	20.74	4.31	4.65	9.33	0.64	7.92	6.02
32	I5_AR2	ActiveIntronRegion	0	19.09	10.24	22.22	12.36	25.82	19.24	26.95	17.84	5.41	10.05	23.53	38.75	33.18	29.47	14.15	19.34	13.16	3.87	4.68	9.82	4.15	12.73	6.78
33	E6_Aa	NovelBoundary	0	20.52	15.33	18.98	15.55	59.34	2.78	47.83	9.45	3.04	4.51	12.16	18.16	34.74	23.31	47.59	29.91	8.42	12.35	9.60	5.75	2.53	17.51	3.50
34	E6_Ab	NovelBoundary	0	33.41	17.89	31.96	9.56	22.67	24.30	32.50	29.12	16.32	4.32	33.75	36.91	55.84	34.02	14.09	18.29	25.15	5.76	30.21	19.75	5.00	8.02	11.52
35	ER6a	ExonRegion	0	24.93	20.79	21.10	6.44	21.26	9.37	22.51	26.79	12.49	5.86	38.12	45.94	37.26	36.36	18.70	26.75	40.53	12.73	33.09	18.44	14.94	14.24	12.07
36	ER6b	ExonRegion	0	115.83	188.65	135.89	105.26	145.34	100.53	137.28	109.01	76.70	77.13	352.58	452.79	306.72	389.13	220.79	257.47	284.88	97.36	99.15	131.77	161.12	186.73	107.47
37	E6b_E7a	KnownJunction	0	123.36	388.62	121.55	112.57	271.39	151.90	239.98	110.00	67.65	81.79	404.79	524.72	297.06	322.15	256.01	250.11	301.82	75.98	115.67	119.21	147.77	212.11	77.42
38	ER6c	ExonRegion	0	107.94	321.31	102.93	98.13	244.38	119.81	206.54	100.83	62.99	72.64	387.22	483.46	250.14	293.97	211.79	231.83	282.78	80.69	86.00	97.87	124.88	195.16	82.23
39	ER7a	ExonRegion	0	168.93	325.76	120.62	132.18	282.47	161.04	271.71	131.87	82.06	82.46	325.01	484.67	344.13	314.22	266.15	250.25	262.55	69.53	97.95	121.14	99.88	224.17	113.81
40	E7b_E8a	KnownJunction	0	263.45	423.41	139.68	160.99	201.87	140.49	275.27	157.89	101.13	83.81	361.25	708.38	373.84	285.77	330.55	229.09	254.42	27.82	81.79	122.53	68.57	342.79	51.39
41	ER7b	ExonRegion	0	207.42	348.76	127.44	144.47	181.95	122.86	219.12	152.10	106.84	80.28	378.85	640.76	349.41	285.03	323.49	211.02	247.57	36.95	66.89	114.89	71.62	311.49	60.20
42	ER8a	ExonRegion	0	203.91	396.79	156.79	154.21	285.23	136.42	245.38	153.75	109.08	94.43	351.63	501.13	331.91	236.34	285.98	171.53	213.58	40.65	66.61	123.07	41.06	266.40	81.56
43	E8_Da	KnownBoundary	1	202.26	444.99	198.63	166.45	336.33	135.09	316.03	151.77	97.63	85.90	135.35	477.16	502.89	218.79	361.46	170.38	67.70	45.02	48.10	148.74	19.65	247.32	62.23
44	ER8b	ExonRegion	0	127.73	188.64	145.14	123.19	199.02	130.61	183.08	136.82	88.37	93.70	217.83	342.29	206.66	157.16	226.02	100.39	106.02	28.17	44.64	91.18	18.44	191.68	44.33
45	IG41	Intergenic	0	3.92	16.23	6.69	10.60	10.01	12.05	8.76	5.86	5.84	3.13	2.02	8.52	2.41	2.11	1.59	1.75	2.13	2.15	4.39	8.22	0.90	4.42	2.48
46	IG41_AR5	ActiveIntergenicRegion	0	3.84	12.52	3.41	11.96	12.03	8.90	11.86	7.27	7.85	3.11	5.93	16.87	8.56	5.49	4.64	1.80	2.78	2.12	8.41	7.03	0.89	6.42	2.44
47	IG41_AR4	ActiveIntergenicRegion	0	6.53	22.12	2.87	9.29	11.00	11.20	14.09	7.62	6.35	4.55	3.24	16.53	5.96	5.16	0.90	3.78	4.79	3.34	5.97	11.97	1.73	8.68	4.62
48	IG41_SR4	SilentIntergenicRegion	0	0.00	0.00	0.00	5.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	18.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.25	0.00
49	IG41_AR2	ActiveIntergenicRegion	0	5.19	23.33	9.14	12.02	12.98	8.45	8.11	7.73	6.54	5.28	2.78	10.04	1.72	1.93	3.16	2.20	1.79	2.04	3.18	9.16	1.34	5.40	3.07
50	IG41_SR2	SilentIntergenicRegion	0	1.95	10.69	10.91	12.70	10.05	23.15	6.06	5.99	8.11	1.88	0.20	4.06	1.19	0.68	0.99	0.76	0.50	2.21	5.36	7.27	0.11	2.13	1.49