Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CUTC	Gene	0	74.23	49.85	46.05	42.90	55.54	29.15	33.84	35.64	20.01	19.16	80.29	109.63	38.42	129.06	132.18	84.10	89.86	32.41	20.96	37.37	20.27	28.89	25.13
2	493385	Transcript	0	0.13	3.97	1.05	0.56	2.04	0.61	0.88	0.50	0.00	0.45	0.25	0.49	0.26	0.09	0.41	0.20	0.00	0.36	0.56	0.79	0.15	2.24	1.42
3	370476	Transcript	0	75.85	31.96	37.74	33.73	60.86	30.64	35.40	27.80	18.27	16.21	68.38	100.00	26.84	96.02	122.72	65.59	66.76	18.84	14.82	28.52	9.94	25.10	19.51
4	471520	Transcript	0	27.19	12.50	13.45	22.24	23.68	33.39	19.21	19.80	4.17	18.59	27.27	32.26	6.66	44.79	37.33	12.30	24.59	17.99	12.14	18.92	17.61	5.63	0.00
5	370472	Transcript	0	0.00	0.00	0.59	1.02	0.45	0.00	0.22	0.43	0.01	0.29	0.01	0.00	0.00	0.02	1.72	0.52	0.00	0.00	0.00	0.75	1.06	0.35	0.99
6	ER1a	ExonRegion	0	0.00	0.98	0.64	0.22	0.72	0.00	0.01	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.92	0.00	3.16	2.58
7	E1a_E2a	KnownJunction	0	0.00	11.71	1.54	0.00	4.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.51	0.00
8	I1	Intron	0	17.44	21.90	21.13	20.17	31.85	30.42	34.62	25.84	21.68	16.51	16.54	57.63	51.93	20.10	22.07	17.95	17.32	10.19	14.57	27.53	6.52	40.25	21.81
9	I1_AR1	ActiveIntronRegion	0	17.44	21.91	21.13	20.18	31.86	30.43	34.63	25.85	21.69	16.51	16.55	57.64	51.94	20.11	22.08	17.95	17.32	10.19	14.58	27.53	6.52	40.26	21.81
10	Ix	Intron	0	8.65	8.31	14.92	14.33	13.91	9.76	18.36	5.74	5.24	5.71	10.29	29.90	36.17	15.89	10.22	12.88	13.89	8.65	11.04	6.32	5.73	15.47	14.54
11	Ix_AR1	ActiveIntronRegion	0	10.10	9.70	19.83	19.05	17.61	12.07	23.74	7.63	6.96	7.59	12.72	35.70	46.16	19.13	13.59	17.11	16.83	11.49	14.67	7.70	5.80	20.57	18.36
12	Ix	Intron	0	23.26	37.50	31.38	37.67	25.45	28.02	25.54	22.19	24.03	13.32	18.46	20.87	24.78	22.65	15.65	27.79	21.87	36.97	26.69	42.05	26.44	20.39	25.05
13	Ix_SR1	SilentIntronRegion	0	23.82	39.02	32.59	38.70	26.30	30.18	26.26	24.25	23.93	13.93	18.64	22.08	25.81	23.73	15.93	28.01	21.96	38.25	26.37	43.47	26.90	21.55	24.84
14	Ix_AR2	ActiveIntronRegion	0	19.24	26.26	22.43	30.19	19.20	11.94	20.27	6.79	24.88	8.85	17.22	11.88	17.20	14.67	13.62	26.34	21.27	27.58	29.25	31.55	23.10	11.79	26.81
15	Ix	Intron	0	19.84	25.19	16.33	24.08	24.52	27.17	23.74	11.04	20.26	7.23	10.74	29.21	29.66	22.22	16.82	18.88	17.82	19.99	23.39	25.75	12.13	15.98	16.78
16	Ix_AR1	ActiveIntronRegion	0	29.15	36.60	24.38	32.52	33.86	23.11	27.15	14.76	26.76	10.06	12.54	33.11	31.66	25.28	19.63	22.55	22.79	17.08	24.48	33.41	12.86	25.51	23.53
17	Ix_SR1	SilentIntronRegion	0	11.81	15.35	9.40	16.83	16.49	30.81	20.87	7.84	14.67	4.80	9.22	25.93	28.05	19.65	14.45	15.76	13.58	22.58	22.54	19.19	11.54	7.77	10.99
18	ER2a	ExonRegion	0	0.53	3.17	2.01	2.01	3.11	2.42	3.49	2.02	0.00	1.81	0.98	1.95	1.02	0.36	1.62	0.79	0.00	1.46	0.84	2.26	0.58	0.30	3.10
19	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	0	25.09	20.40	2.35	5.21	49.89	30.05	32.93	2.37	1.75	1.54	19.58	3.28	6.35	60.07	49.41	50.48	25.24	15.59	1.64	7.03	8.03	3.66	14.64
21	E3_Ab	KnownBoundary	1	81.20	58.41	11.06	16.51	135.74	78.02	88.99	10.80	3.59	4.97	41.43	16.66	6.01	212.31	163.79	129.11	35.34	37.89	4.80	14.51	11.18	2.45	32.95
22	ER3b	ExonRegion	0	72.20	56.64	17.43	15.92	36.90	30.65	21.59	15.59	7.22	6.47	39.67	17.58	6.53	81.33	53.66	62.75	56.12	27.25	5.46	24.96	24.62	8.71	23.72
23	E3a_E4a	KnownJunction	0	17.56	26.11	28.24	23.84	0.00	0.00	0.00	9.04	5.87	15.82	55.70	6.30	19.48	68.75	72.19	31.10	64.33	26.20	16.57	19.69	17.98	13.41	23.05
24	ER3c	ExonRegion	1	16.28	28.31	20.64	21.28	2.68	1.83	0.10	9.17	4.75	12.35	52.78	13.65	9.38	63.84	67.40	23.32	75.92	25.16	14.21	17.51	17.46	14.26	19.88
25	ER3d	ExonRegion	0	0.00	0.00	1.18	2.05	0.90	0.00	0.45	0.87	0.02	0.58	0.01	0.00	0.00	0.03	3.44	1.04	0.00	0.00	0.00	1.51	2.12	0.70	1.98
26	E3b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER4a	ExonRegion	1	27.54	74.68	29.22	26.41	20.92	6.37	18.17	24.51	12.11	14.11	83.71	77.09	14.33	177.10	127.66	88.21	132.91	34.11	18.89	43.91	35.41	18.12	29.20
28	E4a_E5a	KnownJunction	0	59.71	96.43	47.63	43.25	54.67	22.49	33.65	37.50	14.73	18.88	74.07	56.42	12.17	232.03	168.61	137.74	144.46	40.21	11.39	70.24	32.00	28.60	37.65
29	ER5a	ExonRegion	0	47.02	86.83	50.71	45.20	52.85	26.74	33.87	42.38	17.04	16.27	78.06	124.91	55.81	176.22	148.25	124.19	75.98	56.73	15.82	60.89	25.49	32.43	41.11
30	E5a_E6a	KnownJunction	0	109.35	105.84	72.17	62.30	96.18	33.84	29.90	64.90	23.52	17.70	98.50	156.05	35.06	196.95	177.51	106.98	67.51	85.52	22.31	53.88	14.46	25.53	30.82
31	ER6a	ExonRegion	0	95.40	107.14	91.31	74.03	102.68	63.00	66.69	74.66	33.35	26.15	126.87	164.01	70.65	229.81	195.59	160.44	149.35	73.33	43.25	57.66	41.72	45.33	46.52
32	E6_Da	KnownBoundary	0	162.55	153.85	87.19	60.43	93.63	31.18	57.19	63.79	43.03	34.30	134.03	185.31	107.14	263.94	217.94	161.92	148.01	98.29	32.38	48.19	47.14	43.78	60.01
33	ER6b	ExonRegion	0	106.48	133.80	63.84	59.30	75.81	26.43	54.52	62.80	36.10	32.41	99.57	196.60	55.32	228.21	182.48	136.64	171.82	73.67	33.00	48.99	43.34	35.79	46.08
34	E6b_E7a	KnownJunction	0	125.43	130.90	48.82	49.74	79.63	34.41	68.41	61.32	23.44	30.14	80.07	159.65	56.17	145.15	133.01	116.72	180.64	48.58	31.06	56.63	42.07	34.17	35.17
35	ER7a	ExonRegion	0	104.71	100.89	68.52	85.03	64.96	49.05	60.94	54.93	32.59	31.83	112.32	155.74	68.40	168.32	150.95	168.17	167.61	56.20	35.04	56.38	56.32	28.19	37.36
36	E7_Da	NovelBoundary	0	0.00	0.00	0.00	1.86	0.00	0.00	3.71	0.00	0.00	1.16	2.37	13.95	12.99	2.47	5.81	8.37	0.00	2.03	0.00	0.00	2.78	12.00	0.00
37	E7a_E8a	KnownJunction	0	147.06	157.54	75.10	91.86	85.91	71.83	72.07	37.79	32.06	25.44	148.99	203.92	120.77	206.13	212.75	259.50	215.90	64.71	66.54	76.06	64.25	42.50	52.07
38	ER8a	ExonRegion	0	96.84	100.37	61.60	70.38	71.91	49.10	48.73	47.46	25.74	30.53	124.74	152.82	91.56	255.11	215.30	171.45	179.48	65.32	45.66	63.59	44.70	42.84	44.95
39	E8_Da	NovelBoundary	0	3.70	15.00	0.00	4.96	0.00	5.51	0.00	1.64	1.79	1.26	9.90	26.26	0.00	33.90	9.89	47.25	17.48	6.05	19.20	6.26	5.31	3.12	3.67
40	E8a_E9a	KnownJunction	0	98.91	23.09	22.94	39.29	72.92	10.11	27.29	24.93	12.30	15.98	83.07	177.66	40.74	225.38	193.58	54.43	109.49	34.66	12.80	38.48	11.61	17.70	38.07
41	E8a_E10a	KnownJunction	0	27.19	12.50	13.45	22.24	23.68	33.39	19.21	19.80	4.17	18.59	27.27	32.26	6.66	44.79	37.33	12.30	24.59	17.99	12.14	18.92	17.61	5.63	0.00
42	E8a_E11a	NovelJunction	0	0.00	3.09	4.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.21	17.41	0.00	7.24	11.50	4.10	4.68	0.00	0.00	0.00	3.15	0.00	0.00
43	I8	Intron	0	4.45	3.28	1.18	1.51	5.02	3.50	6.00	1.50	1.55	1.16	7.75	21.47	22.90	16.68	7.21	12.10	10.35	2.53	3.09	4.26	1.78	3.77	2.28
44	I8_AR1	ActiveIntronRegion	0	4.36	3.80	1.20	1.15	4.76	4.80	6.46	2.17	1.89	1.44	8.52	22.79	23.72	20.96	10.36	18.63	12.97	4.73	3.58	5.17	3.30	3.31	1.65
45	I8_SR1	SilentIntronRegion	0	4.51	3.02	1.18	1.71	5.17	2.82	5.77	1.15	1.37	1.02	7.38	20.85	22.56	14.47	5.57	8.69	9.00	1.37	2.84	3.80	0.98	4.03	2.62
46	E9a_E10a	KnownJunction	0	55.57	31.18	14.34	21.34	63.84	44.86	29.72	19.35	11.26	18.80	81.92	94.53	12.66	155.45	164.91	122.87	57.88	27.48	4.52	20.65	19.83	27.68	12.21
47	ER9a	ExonRegion	0	75.67	25.64	24.03	39.77	70.62	32.62	29.03	28.21	13.41	22.73	97.82	152.15	33.00	210.79	158.74	94.58	82.17	40.85	7.51	30.93	17.47	22.10	26.95
48	I9	Intron	0	21.93	7.42	8.54	8.20	19.66	6.11	11.06	6.29	5.08	3.99	9.88	53.97	39.87	23.80	18.61	18.11	14.24	3.93	3.49	7.96	1.66	7.89	3.62
49	I9_AR1	ActiveIntronRegion	0	11.23	8.43	6.21	8.76	12.20	5.02	8.23	2.78	4.43	4.56	11.38	72.31	43.82	26.48	18.68	16.27	20.80	4.73	1.06	9.70	2.01	10.54	4.87
50	I9_SR1	SilentIntronRegion	0	15.11	5.03	6.99	5.64	17.02	5.43	10.12	6.03	4.34	2.07	9.67	28.46	30.59	24.10	17.34	22.94	13.90	4.51	2.21	7.36	2.17	5.12	2.61
51	I9_AR2	ActiveIntronRegion	1	22.86	4.66	12.43	10.15	24.86	8.70	15.54	5.69	9.26	4.80	10.56	73.72	65.37	24.41	23.15	16.02	20.29	3.41	5.61	8.35	0.90	9.91	4.38
52	I9_SR3	SilentIntronRegion	0	21.26	9.81	11.02	9.90	23.11	5.93	10.28	10.12	3.33	4.07	9.19	50.06	34.09	21.56	16.00	17.70	6.28	1.85	2.45	5.67	1.19	7.52	3.09
53	I9_AR4	ActiveIntronRegion	0	51.74	9.63	8.04	7.04	27.67	6.49	13.62	9.39	4.80	4.88	7.55	42.46	25.34	20.49	18.46	16.95	5.26	4.56	8.74	7.96	1.63	5.53	2.67
54	E10_Aa	NovelBoundary	1	94.91	9.41	20.28	6.89	49.24	39.07	24.60	6.49	9.64	5.21	17.53	75.32	28.08	14.77	4.45	20.76	17.58	2.11	4.14	5.50	3.09	13.78	0.00
55	ER10a	ExonRegion	0	106.31	61.75	57.43	61.39	96.45	70.43	45.74	51.46	22.74	38.47	128.10	185.38	52.66	223.32	203.09	165.36	109.38	61.23	31.27	46.32	34.66	39.78	17.62
56	ER10b	ExonRegion	0	133.62	61.01	78.09	60.55	125.15	55.17	79.56	55.95	26.89	30.87	133.42	150.45	58.90	224.01	223.71	130.21	145.20	62.91	37.73	59.60	33.06	47.30	40.69
57	E10_Db	NovelBoundary	0	14.22	5.66	15.14	2.06	11.88	15.56	24.78	10.56	7.23	1.07	4.58	0.00	20.94	29.31	19.66	14.53	28.05	2.07	4.24	11.25	2.47	3.12	0.00
58	E10b_E11a	KnownJunction	0	122.69	25.32	77.61	85.77	140.49	37.93	75.30	62.64	33.68	37.69	152.41	154.10	60.55	259.88	277.27	149.62	140.63	66.70	51.95	54.78	37.19	58.17	51.47
59	I10	Intron	0	45.88	17.84	7.42	11.09	24.51	6.40	10.19	8.19	5.73	4.45	14.26	18.49	21.84	16.65	21.18	16.03	13.43	2.57	3.25	6.22	0.00	7.81	2.62
60	I10_AR1	ActiveIntronRegion	0	45.99	17.88	7.44	11.12	24.56	6.42	10.21	8.21	5.74	4.46	14.29	18.54	21.89	16.69	21.23	16.07	13.46	2.58	3.25	6.23	0.00	7.83	2.62
61	E11_Aa	NovelBoundary	0	76.75	14.60	12.03	10.65	39.05	8.46	17.31	19.59	7.99	10.10	20.43	7.20	13.47	19.95	24.23	22.13	18.14	3.73	4.24	11.82	0.00	5.63	12.29
62	ER11a	ExonRegion	0	145.96	50.02	77.15	97.35	115.92	49.58	66.81	55.17	42.27	35.32	174.03	185.60	87.83	255.82	281.32	163.47	164.26	54.62	26.73	69.76	31.27	68.88	43.42
63	E11_Da	KnownBoundary	0	259.75	86.30	100.53	96.26	97.45	59.80	58.82	71.10	46.32	31.43	214.16	210.22	95.12	249.69	317.08	201.57	178.03	39.30	53.84	86.16	24.22	72.99	51.13
64	ER11b	ExonRegion	0	126.60	43.52	73.13	62.25	71.82	31.22	37.87	53.23	34.79	30.89	117.19	196.73	47.32	131.97	196.03	80.69	108.29	22.09	28.00	50.00	11.85	46.53	24.39