Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPAM Gene 0 39.07 34.18 32.58 24.07 26.78 42.28 30.36 20.46 20.18 18.66 25.73 24.35 17.90 23.85 10.27 18.88 28.52 32.62 32.66 37.78 15.23 14.69 20.14 2 480130 Transcript 0 6.70 5.05 2.35 3.15 2.92 0.00 2.73 0.00 1.88 9.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46.22 77.31 22.25 0.00 0.00 0.00 3 498541 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 423155 Transcript 0 0.00 0.00 0.00 0.00 3.31 0.00 0.00 0.00 0.00 0.00 1.03 0.00 0.00 0.00 0.00 0.30 0.00 0.00 1.74 0.00 0.00 1.56 0.29 5 348367 Transcript 0 8.79 5.13 18.63 5.12 14.71 26.47 15.03 5.33 9.82 2.76 9.63 2.00 0.00 9.23 2.68 16.99 21.97 17.33 8.98 32.34 7.57 13.22 10.15 6 369425 Transcript 0 2.30 2.28 2.53 2.33 2.62 4.70 3.62 2.37 2.71 1.08 2.27 1.57 2.60 1.92 0.41 1.21 3.56 3.54 1.82 3.58 1.02 1.61 1.86 7 ER1a ExonRegion 0 13.39 4.17 2.87 2.17 5.85 0.00 5.47 0.00 2.00 6.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.19 36.60 15.54 0.00 0.00 0.00 8 E1a_E4a KnownJunction 0 0.00 5.92 1.83 4.13 0.00 0.00 0.00 0.00 1.77 12.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64.25 118.03 28.95 0.00 0.00 0.00 9 E2_Aa NovelBoundary 0 0.00 0.00 4.46 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 13.27 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 2.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 0.00 0.00 0.00 0.00 0.00 0.00 0.59 13 ER3b ExonRegion 0 0.00 11.13 1.92 0.00 9.54 33.84 17.36 0.91 5.73 0.00 20.90 0.00 0.00 17.83 2.96 19.63 35.87 7.98 10.40 33.72 13.26 12.38 14.35 14 E3_Ac NovelBoundary 0 0.00 26.57 4.05 0.00 29.88 85.35 43.81 1.89 9.35 0.00 47.28 0.00 0.00 23.25 8.90 44.09 79.76 22.80 32.75 78.30 32.93 27.43 22.54 15 E3a_E4a KnownJunction 0 0.00 4.93 6.71 1.53 10.27 36.57 22.52 2.55 16.98 2.53 19.27 0.00 0.00 12.83 0.00 32.38 43.95 34.66 14.78 58.29 15.14 24.68 18.27 16 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 6.62 0.00 0.00 0.00 0.00 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.48 0.00 0.00 3.12 0.00 17 ER3c ExonRegion 1 0.00 16.63 3.68 0.00 19.20 55.45 27.41 1.73 11.12 0.00 34.68 0.00 0.00 25.41 3.07 33.57 68.15 14.78 17.61 63.33 22.94 27.82 16.24 18 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 4.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.30 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4a ExonRegion 0 2.12 12.61 4.90 2.73 12.31 47.31 21.18 1.73 13.59 11.47 27.06 0.00 0.00 11.37 0.00 30.91 46.87 60.98 102.57 82.13 15.87 22.50 14.68 21 ER4b ExonRegion 0 2.14 1.71 3.61 5.58 8.11 3.88 6.89 3.81 10.85 6.97 20.58 4.61 0.61 5.61 0.03 6.62 22.68 32.54 36.79 30.47 7.87 2.78 2.65 22 E4a_E5a KnownJunction 1 0.00 0.00 6.56 3.16 0.00 2.78 25.39 9.57 16.58 7.47 71.81 18.91 6.82 11.60 0.00 7.86 84.71 10.11 13.74 55.22 27.92 0.00 0.00 23 ER5a ExonRegion 0 11.67 8.54 7.71 5.10 10.36 9.63 18.21 5.54 17.07 12.89 40.28 20.42 6.19 28.24 3.06 32.06 47.12 46.94 31.42 74.83 17.53 17.35 24.95 24 E5a_E6a KnownJunction 0 28.52 11.58 4.94 0.00 19.27 44.46 14.09 10.43 19.33 15.50 39.80 31.66 6.82 30.96 0.00 14.61 17.58 26.57 26.26 44.29 9.33 10.90 15.37 25 ER6a ExonRegion 0 15.54 10.77 2.95 3.96 18.06 71.56 22.87 9.94 20.38 14.08 29.13 26.37 2.66 19.42 1.32 10.13 28.96 26.54 17.74 42.12 9.32 14.40 21.89 26 E6_Da KnownBoundary 1 23.63 18.55 2.48 6.19 28.35 88.19 43.90 13.23 14.00 11.93 25.01 12.00 0.00 19.19 4.45 7.86 49.18 10.65 17.60 30.30 0.00 5.88 28.60 27 E6_Db KnownBoundary 0 40.82 24.27 6.62 3.53 3.74 41.17 18.68 11.38 16.20 20.84 50.70 30.76 0.00 29.61 4.45 19.23 57.60 55.22 25.60 74.34 42.19 15.49 22.71 28 ER6b ExonRegion 1 23.62 17.06 4.27 6.02 14.16 63.83 34.29 11.82 19.96 20.61 43.33 21.37 0.00 22.89 7.02 13.81 57.29 43.33 24.04 48.87 19.55 13.98 26.62 29 ER6c ExonRegion 0 18.92 24.15 8.71 3.07 3.79 25.98 17.07 11.99 16.83 18.33 48.64 20.66 14.36 24.12 1.09 20.00 45.46 49.08 18.32 55.32 38.93 10.37 30.83 30 E6c_E7a KnownJunction 0 3.48 22.96 8.49 2.80 3.82 5.22 12.90 10.56 14.24 10.40 40.01 18.91 8.28 17.72 0.00 16.41 30.01 36.27 13.27 44.81 39.78 11.21 19.46 31 ER7a ExonRegion 0 7.55 11.60 3.00 5.30 13.31 13.36 13.70 10.07 24.55 12.37 24.71 41.83 10.14 30.42 2.74 22.09 38.27 41.80 20.83 52.99 21.86 14.08 33.18 32 E7a_E8a KnownJunction 1 10.37 9.80 3.10 10.39 29.20 20.56 33.17 11.46 22.42 17.62 19.79 58.07 0.00 64.87 0.00 16.83 58.72 44.06 3.58 71.20 26.19 26.88 58.90 33 ER8a ExonRegion 0 5.59 13.47 7.35 11.15 12.84 35.20 20.77 11.36 23.19 16.04 25.62 21.15 16.13 40.09 6.21 28.65 44.07 50.15 21.77 54.52 31.57 15.22 37.48 34 E8a_E9a KnownJunction 0 7.41 3.16 9.61 10.12 15.53 54.80 21.20 4.48 24.54 15.69 25.53 30.91 27.27 26.13 0.00 58.02 34.60 43.24 13.74 79.26 16.43 11.02 24.58 35 ER9a ExonRegion 0 9.96 16.73 9.45 7.71 15.47 34.43 18.58 7.49 20.69 22.77 35.63 20.00 27.34 44.68 5.68 34.59 49.06 54.25 26.65 59.68 28.93 18.26 30.53 36 E9a_E10a KnownJunction 0 13.26 8.29 15.94 7.46 0.00 21.41 33.78 11.17 17.13 25.92 41.96 42.76 39.93 38.50 9.77 43.24 67.51 76.19 20.52 66.35 22.30 17.21 23.22 37 ER10a ExonRegion 0 10.60 15.12 13.19 10.96 6.70 41.91 20.34 12.21 18.56 22.26 48.48 36.42 43.27 44.49 5.08 49.33 49.75 79.87 21.94 58.63 37.30 14.93 28.79 38 E10a_E11a KnownJunction 0 9.71 16.90 15.08 13.25 19.95 64.79 21.77 12.28 16.98 32.66 61.86 48.47 33.28 51.98 4.45 52.04 64.14 94.64 40.19 54.52 49.11 25.47 18.61 39 E11_Aa NovelBoundary 0 0.00 8.29 0.00 1.40 4.33 0.00 4.50 0.00 5.84 0.00 2.68 0.00 21.26 2.41 8.90 4.10 0.00 1.74 0.00 5.50 0.00 5.94 0.00 40 ER11a ExonRegion 0 13.05 17.78 5.43 11.25 20.49 49.97 23.50 14.18 21.13 22.75 46.49 45.73 34.30 51.25 5.53 39.61 49.06 76.62 36.39 58.15 37.95 14.37 40.60 41 E11a_E12a KnownJunction 0 24.00 19.21 1.48 12.85 12.31 66.95 31.27 20.54 20.20 18.96 43.27 56.87 65.58 60.16 4.33 34.44 53.86 78.35 12.33 38.48 36.94 2.57 44.73 42 ER12a ExonRegion 0 17.95 14.76 5.96 9.99 8.40 50.78 32.15 13.24 15.91 10.41 46.27 48.45 24.39 43.53 4.90 43.99 68.03 64.32 49.09 58.83 47.73 21.98 40.70 43 E12a_E13a KnownJunction 0 17.04 13.55 13.51 8.96 11.97 36.57 30.21 25.42 11.31 8.65 50.49 42.91 12.66 59.86 5.81 51.52 43.48 47.80 95.81 56.82 43.61 31.54 40.63 44 ER13a ExonRegion 0 16.36 14.42 8.89 11.82 24.16 49.60 27.55 14.88 15.00 14.53 45.07 43.66 36.22 50.61 3.62 34.74 60.84 49.34 50.80 50.45 36.05 22.37 35.93 45 E13a_E14a KnownJunction 1 10.15 25.85 8.04 11.85 11.88 32.25 19.70 12.61 26.42 26.06 28.59 51.17 0.00 51.27 4.45 44.95 56.57 39.01 61.27 42.89 24.77 10.29 27.91 46 ER14a ExonRegion 0 14.82 16.16 9.12 9.59 19.60 43.16 31.35 16.42 34.62 25.45 43.54 67.83 26.37 41.81 6.80 30.63 67.38 52.84 52.45 60.92 24.47 27.29 26.51 47 E14a_E15a KnownJunction 1 55.12 29.47 9.58 10.02 31.32 73.93 46.19 24.89 42.62 27.56 51.33 72.92 35.39 58.45 9.39 18.46 76.39 67.69 41.51 63.92 30.58 14.45 14.77 48 ER15a ExonRegion 0 31.43 21.12 8.53 11.03 24.89 52.05 27.37 18.35 36.98 29.23 48.73 52.31 25.30 47.27 7.66 45.79 57.54 74.83 71.12 62.22 41.43 18.63 39.61 49 E15a_E16a KnownJunction 0 34.60 23.15 12.80 6.13 30.05 37.65 34.98 13.88 27.34 39.54 66.65 79.38 15.10 33.85 22.87 28.37 46.75 72.21 68.90 64.49 40.59 18.00 31.16 50 ER16a ExonRegion 0 30.87 29.56 12.54 11.37 21.15 29.36 24.57 19.98 23.15 26.83 47.96 59.38 26.56 47.65 9.23 40.51 64.03 85.44 56.84 72.76 43.43 19.38 40.76 51 E16a_E17a KnownJunction 0 16.52 38.02 21.26 19.51 19.95 31.97 30.96 34.63 23.15 34.33 37.69 43.51 32.63 39.20 9.52 51.01 57.04 106.78 71.53 91.72 53.81 16.29 52.84 52 ER17a ExonRegion 0 14.70 22.11 15.91 9.02 19.14 26.91 23.05 12.00 15.81 21.78 35.94 27.26 22.53 31.70 9.89 38.09 51.70 68.24 61.06 51.72 37.00 16.43 30.61 53 E17a_E18a KnownJunction 0 13.93 20.79 20.79 10.59 40.83 48.95 26.45 9.53 21.30 17.41 26.32 18.16 12.50 41.50 8.90 19.14 61.24 58.82 71.25 50.75 29.84 13.23 15.62 54 ER18a ExonRegion 0 23.15 27.50 18.70 20.04 24.83 42.35 32.30 23.72 27.22 24.76 39.53 30.32 21.36 42.53 8.81 37.08 58.57 87.69 59.81 71.77 40.77 16.97 40.37 55 E18a_E19a KnownJunction 1 13.78 33.61 9.02 12.19 13.58 78.65 18.59 33.15 17.42 30.00 9.05 31.36 13.31 33.37 0.00 3.93 72.84 62.47 38.31 57.33 39.54 14.33 39.27 56 ER19a ExonRegion 0 26.77 23.56 9.34 10.99 6.90 43.77 19.15 13.79 14.15 18.70 25.82 29.52 22.70 43.11 8.16 23.26 44.78 57.14 41.14 53.24 32.84 12.01 33.82 57 E19a_E20a KnownJunction 0 10.37 20.92 13.28 19.84 12.99 41.85 24.55 15.98 12.01 15.82 17.85 0.00 0.00 43.56 0.00 48.19 43.20 93.15 25.13 48.32 35.21 7.29 39.10 58 ER20a ExonRegion 0 26.97 16.56 16.64 10.62 6.66 41.78 21.61 10.48 12.08 16.81 32.91 19.59 8.24 42.48 2.64 40.96 30.09 79.88 45.82 65.55 36.45 19.66 45.78 59 E20a_E21a KnownJunction 0 36.23 28.88 13.96 6.73 21.22 10.39 26.90 16.39 23.00 17.59 40.22 24.61 0.00 34.61 5.19 41.01 37.77 70.30 47.44 93.70 23.60 11.76 48.06 60 ER21a ExonRegion 0 17.41 24.33 20.47 11.34 21.06 43.49 29.99 15.25 18.09 20.25 35.22 19.01 7.82 37.31 7.92 35.58 46.03 82.48 41.45 68.19 33.54 15.88 42.49 61 E21_Da KnownBoundary 0 0.00 0.00 0.00 0.00 4.07 5.79 4.24 0.00 0.00 0.00 0.00 0.00 6.82 0.00 0.00 0.00 3.83 0.00 0.00 3.26 0.00 0.00 8.28 62 E21a_E21b KnownJunction 0 23.19 33.74 22.03 14.32 21.56 73.42 24.73 25.01 18.17 27.45 50.54 0.00 6.17 41.20 6.06 31.70 49.37 82.24 80.47 78.87 27.24 32.51 55.74 63 ER21b ExonRegion 0 1.46 1.49 1.27 1.05 1.35 2.05 3.27 1.33 1.83 0.17 1.70 0.77 2.56 2.88 0.57 1.17 3.02 4.90 2.33 2.93 1.25 1.36 1.33 64 E21_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 7.81 2.16 0.00 0.00 0.00 0.00 2.21 0.00 0.00 0.00 4.45 0.00 8.13 10.99 4.80 2.68 0.00 0.00 0.00 65 ER21c ExonRegion 0 22.11 23.54 21.19 14.82 15.33 39.96 24.23 20.86 23.38 22.84 44.89 27.99 25.09 44.81 8.57 25.92 44.47 71.35 52.97 59.23 32.96 18.15 34.84 66 E21_Db KnownBoundary 0 0.00 3.35 2.57 1.76 8.66 8.35 6.05 2.46 2.78 0.00 10.11 0.00 0.00 4.83 0.00 0.00 4.77 6.30 0.00 6.52 3.15 3.12 4.35 67 E21b_E21c KnownJunction 1 38.38 24.67 17.30 19.18 35.99 48.55 57.50 14.54 23.29 25.44 49.17 62.12 75.64 36.49 8.78 20.51 48.62 54.59 83.39 47.62 19.09 27.07 23.90 68 ER21d ExonRegion 0 3.95 4.36 3.62 5.82 5.92 8.18 6.85 4.21 5.55 1.61 5.07 3.13 4.73 2.76 0.97 2.46 4.43 6.51 3.53 7.11 1.69 4.12 4.11 69 E21_Ac KnownBoundary 0 9.93 18.09 5.26 3.36 4.33 27.20 4.24 0.00 2.37 4.43 4.58 6.15 7.14 2.47 5.81 0.00 9.44 9.20 3.67 3.26 0.00 8.82 4.35 70 ER21e ExonRegion 0 30.80 29.10 21.04 12.90 34.05 64.56 43.44 10.07 26.85 24.80 50.02 49.04 41.40 52.59 9.35 28.85 53.33 49.70 78.65 62.36 23.75 30.14 36.25 71 E21_Dc KnownBoundary 0 7.56 3.35 1.39 5.73 11.80 0.00 17.05 4.31 7.93 1.13 11.53 0.00 6.66 6.71 4.45 0.00 4.30 2.11 4.05 11.51 3.15 0.00 4.10 72 E21c_E22a KnownJunction 0 43.93 32.82 11.18 5.26 20.12 88.64 26.32 9.82 20.63 17.08 48.70 52.22 19.15 94.94 9.64 20.76 53.39 37.43 82.83 58.61 16.68 19.35 18.95 73 ER21f ExonRegion 0 6.12 5.54 7.75 4.79 5.84 7.12 7.97 6.31 6.18 3.61 4.56 3.96 5.72 3.94 0.54 2.40 3.46 6.30 3.26 7.87 2.15 2.55 3.85 74 E22_Aa NovelBoundary 0 7.48 9.01 9.28 3.73 0.00 19.08 6.49 4.44 5.47 3.09 11.69 0.00 0.00 4.83 5.19 8.46 3.46 6.59 17.98 9.20 0.00 0.00 8.19 75 ER22a ExonRegion 0 85.78 72.71 73.31 51.84 54.26 78.30 56.99 40.54 34.67 33.68 37.32 38.87 28.41 32.16 21.92 25.32 36.73 35.88 50.79 52.19 16.31 24.07 26.89 76 ER22b ExonRegion 0 17.58 5.32 30.54 8.70 19.14 16.36 7.54 8.11 2.66 3.00 0.00 4.00 0.00 5.62 5.36 1.60 0.00 0.00 3.19 6.38 0.00 1.76 2.03