Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM178A Gene 0 79.29 116.94 31.74 50.33 119.76 79.78 89.36 72.36 105.44 49.81 83.99 102.10 108.75 95.31 41.66 72.86 81.92 52.48 48.67 121.91 43.74 50.89 46.98 2 370271 Transcript 0 15.61 20.64 6.64 13.46 28.90 16.24 27.92 11.95 13.47 7.23 5.41 9.60 13.94 10.20 19.18 13.98 10.12 15.82 16.70 31.67 14.66 5.02 13.38 3 238961 Transcript 0 138.45 188.41 53.26 69.07 164.33 104.25 123.70 112.78 137.89 64.47 75.10 108.14 105.40 103.36 57.07 76.94 90.83 47.17 58.75 132.06 54.57 59.50 43.70 4 420334 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 370269 Transcript 0 5.18 7.46 1.54 11.29 7.12 4.08 8.51 15.52 8.04 4.76 5.41 6.91 18.91 3.63 2.78 4.81 4.46 0.00 5.18 21.32 2.91 4.88 3.03 6 481654 Transcript 1 21.98 67.81 8.55 14.28 37.92 14.33 43.48 20.98 24.84 14.56 17.52 47.14 69.34 20.06 9.22 15.97 20.00 8.01 7.48 52.50 3.01 12.84 3.72 7 IG44_AR1 ActiveIntergenicRegion 0 5.55 7.94 12.95 6.38 12.36 14.76 10.34 14.59 8.50 5.29 2.67 3.71 0.77 5.48 7.33 4.67 1.73 7.87 11.08 11.35 2.94 1.19 1.96 8 ER1a ExonRegion 0 1.15 0.00 1.34 0.12 0.49 9.84 3.49 0.94 0.90 0.73 1.76 0.00 0.00 4.43 3.96 1.08 6.30 3.19 0.87 4.64 2.00 0.38 2.67 9 ER1b ExonRegion 1 29.63 16.95 10.01 4.09 13.82 46.76 32.44 23.62 10.91 9.56 49.61 0.00 0.00 56.30 50.77 52.51 80.87 59.44 44.60 73.40 29.38 6.25 47.97 10 ER1c ExonRegion 1 19.81 13.96 20.70 8.79 10.80 33.82 18.94 33.23 36.56 23.89 68.42 10.30 9.09 86.80 50.94 68.51 71.74 80.28 55.90 95.01 67.42 18.57 46.36 11 E1_Da NovelBoundary 0 14.15 18.88 24.07 3.50 20.71 27.65 12.19 21.48 7.58 2.55 5.21 0.00 6.82 4.59 17.80 7.18 7.29 20.31 8.38 25.31 5.56 0.00 6.66 12 E1a_E2a KnownJunction 0 6.37 23.75 6.71 14.95 17.23 37.48 6.58 22.30 53.01 16.98 75.23 62.42 60.39 88.23 19.04 46.48 61.06 77.81 53.74 79.39 45.96 27.37 42.60 13 I1_AR1 ActiveIntronRegion 0 11.43 9.82 23.87 6.35 13.87 7.03 8.28 29.83 20.54 8.62 16.06 7.34 11.63 9.53 12.13 6.76 14.55 12.61 7.27 20.85 5.32 8.89 5.84 14 ER2a ExonRegion 0 7.41 17.24 9.50 18.12 47.01 74.14 39.36 24.04 70.91 20.15 102.14 67.99 147.42 71.46 18.13 59.17 91.37 58.88 27.29 131.58 57.70 29.97 28.83 15 E2a_E3a KnownJunction 0 16.67 20.52 11.18 19.84 80.14 69.68 98.04 22.63 72.40 25.17 108.97 66.17 87.98 69.93 23.98 74.34 104.63 38.05 9.32 171.75 67.58 31.41 21.85 16 ER3a ExonRegion 1 22.05 40.91 15.32 21.17 50.03 51.89 72.45 38.98 96.02 38.42 113.09 164.18 218.89 153.20 29.44 102.62 136.23 75.00 48.17 170.16 60.15 52.33 60.22 17 E3a_E4a KnownJunction 1 19.93 58.94 23.18 36.63 62.99 89.04 66.42 39.80 125.35 41.07 96.71 216.37 257.78 146.68 20.03 97.50 96.12 25.99 40.57 110.83 15.57 65.21 65.05 18 ER4a ExonRegion 0 17.55 41.41 20.32 25.21 29.99 47.77 34.08 38.03 110.95 37.71 99.01 146.01 199.00 122.82 24.76 105.77 85.82 20.71 29.66 139.58 24.73 56.40 41.97 19 E4a_E5a KnownJunction 1 16.52 38.15 18.27 22.08 15.37 32.71 46.15 38.28 90.74 19.53 117.50 81.78 191.38 104.83 22.99 62.80 74.71 20.06 31.72 139.85 30.02 45.56 40.21 20 ER5a ExonRegion 1 24.07 50.24 26.64 22.61 32.01 29.41 44.62 33.22 94.46 26.34 107.67 158.11 243.71 124.22 16.12 72.32 77.88 28.74 38.22 142.87 24.08 41.28 48.18 21 ER5b ExonRegion 1 25.39 60.56 15.54 29.49 62.28 49.65 70.62 39.23 91.78 38.26 117.21 143.30 181.64 157.42 29.41 115.46 135.39 86.41 57.42 144.04 68.00 59.03 72.97 22 E5b_E6a KnownJunction 0 17.78 38.68 8.99 17.88 20.80 52.98 64.12 17.95 77.43 50.69 110.08 81.18 121.26 148.10 34.49 73.74 123.42 56.92 63.91 126.81 87.60 45.13 67.69 23 ER6a ExonRegion 0 22.77 26.47 11.62 18.31 25.89 62.99 70.38 34.57 82.14 38.14 119.46 90.07 108.66 127.23 37.10 64.13 138.54 64.72 49.80 140.81 67.48 40.85 79.74 24 E6_Da KnownBoundary 0 7.56 15.39 1.69 13.85 7.56 10.05 18.59 12.03 6.19 1.67 2.53 0.00 19.80 2.18 0.00 7.35 4.77 10.65 9.32 26.33 10.44 10.47 8.71 25 E6a_E7a KnownJunction 1 17.19 21.25 12.27 13.65 54.67 75.13 60.94 29.70 83.01 37.53 145.88 147.35 83.92 111.48 15.20 73.14 142.68 59.82 41.04 136.53 51.71 44.21 58.30 26 ER6b ExonRegion 0 15.61 20.64 6.64 13.46 28.90 16.24 27.92 11.95 13.47 7.23 5.41 9.60 13.94 10.20 19.18 13.98 10.12 15.82 16.70 31.67 14.66 5.02 13.38 27 I6 Intron 0 6.13 20.21 2.27 8.49 16.17 12.07 20.22 5.65 9.14 3.25 1.60 6.52 7.87 2.16 1.55 2.71 5.74 2.55 4.48 15.85 1.73 1.64 3.53 28 I6_SR1 SilentIntronRegion 0 8.15 25.53 1.94 9.04 15.99 10.23 18.46 6.16 10.63 3.40 1.16 6.88 6.80 1.69 1.26 2.57 3.07 2.93 4.23 13.28 1.32 1.11 2.54 29 I6_AR1 ActiveIntronRegion 0 2.80 11.42 2.82 7.61 16.51 15.15 23.18 4.82 6.69 3.01 2.34 5.92 9.66 2.93 2.02 2.95 10.18 1.93 4.91 20.15 2.43 2.52 5.18 30 ER7a ExonRegion 1 21.13 54.34 12.59 28.92 76.44 67.48 62.45 33.25 90.67 36.51 114.20 141.18 101.85 127.98 12.90 92.35 109.98 55.87 60.70 123.20 45.26 53.60 61.57 31 E7a_E8a KnownJunction 1 20.60 26.90 17.65 23.07 43.97 60.87 78.21 31.75 87.56 31.19 90.81 125.89 61.03 97.12 14.09 85.62 69.75 27.03 28.42 102.84 25.39 47.70 21.51 32 ER8a ExonRegion 0 19.11 44.24 16.33 34.92 72.10 72.62 82.46 42.70 105.28 36.70 89.96 172.30 122.69 106.63 22.48 73.38 77.02 31.77 38.07 109.43 31.21 59.53 46.30 33 E8a_E9a KnownJunction 0 41.64 57.88 17.50 49.54 139.13 86.43 87.00 46.70 121.18 38.47 113.19 233.18 168.01 121.73 24.11 104.08 76.58 26.90 26.92 122.91 37.00 31.96 36.71 34 ER9a ExonRegion 0 23.67 48.98 17.75 41.19 60.76 56.17 54.69 35.29 104.80 37.34 99.16 147.75 110.56 99.20 27.49 75.54 81.08 31.75 35.66 147.35 40.42 46.99 43.31 35 E9a_E10a KnownJunction 0 12.82 41.57 14.84 39.82 21.39 28.11 26.28 40.42 81.02 34.41 53.59 50.72 91.71 68.87 17.80 50.33 51.33 22.26 28.71 122.08 24.46 43.23 46.95 36 ER10a ExonRegion 0 29.24 51.45 16.51 43.38 56.47 60.06 59.49 51.19 112.72 44.80 118.26 137.92 114.41 116.40 40.16 70.35 114.88 33.77 48.20 151.62 37.09 52.23 66.96 37 E10a_E11a KnownJunction 0 34.23 54.33 24.25 61.23 67.91 96.93 82.32 52.53 131.10 56.06 138.03 172.86 176.45 144.74 58.59 99.97 79.57 46.30 55.72 184.21 43.43 57.68 54.80 38 ER11a ExonRegion 0 29.88 63.57 15.13 43.90 76.24 69.44 93.95 48.32 95.30 40.51 107.32 120.25 148.03 130.57 50.81 66.06 102.51 55.91 47.80 154.45 33.66 60.20 63.86 39 E11_Da NovelBoundary 1 44.67 27.69 3.55 14.25 34.30 22.37 77.90 10.10 17.13 6.82 19.27 30.91 90.90 31.55 33.13 17.43 34.32 6.47 9.22 47.75 12.60 17.21 24.07 40 E11a_E12b KnownJunction 0 16.74 54.92 9.55 35.56 64.60 86.26 81.97 65.96 90.42 38.84 113.77 130.54 116.71 81.76 24.48 48.45 63.58 31.55 24.38 104.25 32.49 46.54 34.32 41 I11 Intron 0 17.43 17.73 4.55 8.99 20.36 6.22 27.39 9.36 13.63 6.27 10.97 26.77 51.09 17.06 10.74 15.84 16.79 10.09 9.59 35.63 4.88 11.53 5.79 42 I11_SR1 SilentIntronRegion 1 24.37 14.64 2.63 6.68 17.06 3.39 25.46 4.77 7.95 4.04 6.16 23.78 54.59 16.54 12.13 8.56 10.52 9.55 8.84 31.50 3.85 7.07 3.32 43 I11_SR2 SilentIntronRegion 0 14.91 17.47 5.68 12.04 21.14 9.68 29.32 13.98 17.77 7.88 15.81 30.45 56.61 18.28 10.77 24.73 23.97 12.50 12.12 42.30 6.86 13.50 8.49 44 I11_AR2 ActiveIntronRegion 0 11.61 23.81 5.17 5.75 24.35 2.85 26.31 6.28 13.61 6.28 7.75 23.32 32.24 15.15 8.37 7.25 10.52 5.35 4.89 27.03 1.95 14.61 3.64 45 E12_Aa NovelBoundary 0 48.08 78.08 4.73 25.74 65.53 29.64 56.31 8.95 25.84 3.95 19.90 44.26 72.07 22.07 0.00 36.32 12.81 4.60 32.00 56.95 5.37 32.64 16.99 46 ER12a ExonRegion 1 21.98 67.81 8.55 14.28 37.92 14.33 43.48 20.98 24.84 14.56 17.52 47.14 69.34 20.06 9.22 15.97 20.00 8.01 7.48 52.50 3.01 12.84 3.72 47 E12_Ab KnownBoundary 1 52.75 107.02 4.79 29.57 69.35 14.82 69.91 21.44 22.92 8.97 14.42 33.91 89.12 12.48 29.92 19.14 27.86 1.74 0.00 32.85 2.78 8.39 11.69 48 ER12b ExonRegion 1 56.75 95.62 20.01 47.25 93.99 72.54 90.70 74.48 105.87 50.00 97.90 150.22 239.01 112.41 41.36 70.57 83.40 55.27 36.48 148.23 20.14 53.35 41.98 49 E12a_E13a KnownJunction 1 61.12 68.54 28.36 51.08 81.83 96.36 105.90 96.40 97.83 56.54 81.97 210.52 244.46 102.48 55.75 118.35 105.66 48.29 34.54 144.77 13.41 67.85 68.63 50 ER13a ExonRegion 1 50.48 84.28 17.88 49.67 83.25 95.97 98.76 92.18 105.95 59.89 83.69 189.86 190.03 118.50 43.63 110.08 106.24 50.51 40.70 142.63 26.53 66.44 81.57 51 ER13b ExonRegion 0 44.84 87.80 16.28 48.67 129.54 114.84 119.18 83.46 132.23 56.65 142.40 162.90 188.23 137.65 31.58 105.43 116.48 76.69 52.24 158.33 61.66 56.07 66.21 52 E13b_E14a KnownJunction 1 57.79 77.42 13.39 56.74 177.50 75.13 119.99 101.95 135.68 54.34 154.51 216.52 151.13 116.43 18.91 107.92 94.90 115.45 62.21 124.45 62.70 55.17 49.34 53 ER14a ExonRegion 0 52.87 88.36 15.27 42.32 97.53 88.32 107.21 78.73 116.42 52.69 148.83 204.99 135.10 167.85 37.69 138.99 129.51 93.80 77.39 173.32 81.92 43.52 79.53 54 E14a_E15a KnownJunction 0 72.24 86.17 14.22 40.65 87.78 42.31 98.57 81.82 116.93 56.33 120.40 200.32 129.21 149.10 49.94 144.66 134.46 74.04 82.45 159.15 99.34 52.72 108.67 55 ER15a ExonRegion 0 64.91 87.65 23.84 45.63 144.49 81.67 119.65 68.65 127.41 56.28 169.94 127.87 107.66 128.97 47.28 122.30 120.63 90.22 58.68 159.48 95.26 53.22 73.35 56 E15a_E16a KnownJunction 1 98.24 100.84 29.92 45.52 159.68 116.75 150.51 71.51 119.21 66.48 180.10 118.84 93.50 164.46 24.97 128.60 137.35 89.04 80.00 224.80 71.11 63.44 54.80 57 ER16a ExonRegion 0 55.13 84.95 24.90 41.34 118.91 121.60 130.79 72.37 117.40 55.79 156.97 151.07 122.19 132.38 51.45 104.77 119.66 71.66 66.65 180.32 53.24 56.87 58.64 58 E16_Da NovelBoundary 0 10.00 18.35 1.54 10.92 8.23 0.00 12.63 8.05 17.97 5.37 0.00 17.56 15.10 2.94 0.00 4.36 7.67 17.41 0.00 17.64 5.62 8.45 7.94 59 E16a_E17a KnownJunction 0 41.64 100.05 19.96 41.29 117.83 101.99 83.34 61.57 118.37 67.77 165.31 130.69 93.18 104.19 63.17 91.86 63.77 42.74 41.13 185.17 33.61 57.38 40.80 60 I16 Intron 0 5.71 6.50 2.15 10.26 16.66 6.79 19.39 7.80 8.37 4.03 4.55 12.82 24.01 5.55 3.33 8.00 9.45 10.69 4.29 16.47 2.60 10.17 9.39 61 I16_SR1 SilentIntronRegion 0 5.75 6.55 2.17 10.32 16.77 6.84 19.52 7.86 8.43 4.05 4.59 12.90 24.17 5.58 3.35 8.06 9.51 10.76 4.32 16.58 2.61 10.24 9.45 62 E17_Aa NovelBoundary 0 0.00 11.71 1.33 17.98 27.42 0.00 10.47 9.78 12.44 4.24 12.21 11.40 48.05 4.71 5.93 0.00 25.25 4.89 0.00 28.63 0.00 17.39 11.35 63 ER17a ExonRegion 0 43.66 83.32 22.34 30.32 119.72 110.69 83.97 63.73 105.95 50.51 114.41 120.00 152.85 110.25 46.75 98.58 100.55 45.96 50.48 148.99 27.57 55.88 35.39 64 E17_Da NovelBoundary 0 10.08 21.51 11.21 22.21 8.32 17.43 42.84 23.86 20.60 18.72 22.90 30.61 43.02 7.12 26.21 20.08 26.18 17.70 26.64 69.35 2.72 8.08 3.50 65 E17a_E18a KnownJunction 0 68.46 63.15 14.55 17.25 103.23 77.06 51.45 56.39 115.91 50.77 104.82 181.26 115.25 115.96 25.71 78.87 90.51 33.37 40.57 81.49 22.86 21.31 61.46 66 I17 Intron 0 18.97 18.29 7.38 12.07 34.56 14.39 27.01 13.14 19.67 7.69 10.03 12.75 17.61 17.04 10.38 22.06 13.45 12.85 13.36 30.82 7.38 15.34 14.71 67 I17_SR1 SilentIntronRegion 0 14.47 15.23 7.81 10.55 31.07 11.77 25.74 10.82 14.91 6.40 9.67 10.44 18.43 17.79 11.06 22.82 13.49 13.98 14.97 28.45 7.74 11.78 15.82 68 I17_AR2 ActiveIntronRegion 0 36.15 30.05 5.82 17.93 48.05 24.43 32.00 22.02 37.83 12.63 11.46 21.60 14.68 14.37 7.89 19.35 13.34 8.68 7.38 40.07 6.07 28.97 10.64 69 E18_Aa NovelBoundary 0 58.16 56.31 25.46 17.38 45.67 40.20 53.83 27.36 59.55 15.50 11.90 25.36 20.78 31.02 34.49 18.97 37.31 14.38 21.37 77.60 14.52 38.09 4.35 70 ER18a ExonRegion 0 63.74 98.87 49.07 47.01 116.32 96.58 107.85 90.06 136.06 66.49 133.19 128.04 85.88 144.51 54.72 99.75 98.80 51.18 52.58 150.40 71.51 80.23 64.47 71 E18a_E19a KnownJunction 0 113.58 137.08 62.33 69.36 104.07 104.71 191.89 114.19 154.57 76.53 141.19 129.94 151.45 130.67 55.26 140.05 77.05 56.13 55.91 169.51 92.60 76.05 60.27 72 ER19a ExonRegion 0 93.22 148.19 46.03 59.32 130.37 88.58 109.60 99.92 147.95 67.27 98.33 130.39 149.06 139.86 52.98 127.76 128.64 71.93 66.98 178.72 75.37 72.23 59.12 73 E19_Da KnownBoundary 0 6.67 10.79 3.02 15.02 18.59 7.95 18.06 10.10 12.59 3.17 2.11 18.46 14.77 9.89 0.00 0.00 4.77 0.00 0.00 20.77 3.15 9.37 7.26 74 E19a_E20a KnownJunction 0 120.47 163.06 50.32 52.31 118.00 86.26 120.79 104.57 127.54 54.31 71.18 123.34 127.59 126.14 54.39 87.41 112.67 46.39 59.39 139.08 68.45 54.07 42.68 75 ER19b ExonRegion 0 5.18 7.46 1.54 11.29 7.12 4.08 8.51 15.52 8.04 4.76 5.41 6.91 18.91 3.63 2.78 4.81 4.46 0.00 5.18 21.32 2.91 4.88 3.03 76 ER20a ExonRegion 0 156.43 213.76 56.20 85.83 210.66 122.25 126.62 120.98 148.24 74.63 79.03 92.93 83.22 80.58 59.74 66.46 68.99 47.95 58.11 125.03 40.68 64.94 44.71