Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DNMBP Gene 0 33.32 11.43 16.76 10.53 14.54 3.33 12.82 16.27 20.51 13.32 226.17 225.15 131.55 142.14 103.75 284.08 63.35 21.57 7.67 11.11 122.97 52.99 43.28 2 324109 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 393570 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 342239 Transcript 0 0.56 0.92 1.33 0.36 1.20 0.00 0.99 0.14 1.28 1.46 5.07 6.59 8.68 5.16 4.84 6.67 3.13 0.98 0.05 0.58 9.39 2.60 2.08 5 422692 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 370423 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 472036 Transcript 1 6.38 2.13 0.54 1.73 4.30 0.18 2.81 1.72 2.41 0.35 8.03 29.90 16.95 3.65 5.79 20.47 3.87 3.36 0.03 0.82 14.68 5.33 6.13 8 ER1a ExonRegion 0 3.85 0.40 1.30 0.00 1.66 0.22 1.53 0.00 0.47 0.01 24.47 5.39 1.49 14.26 19.07 54.66 6.60 2.82 0.00 0.00 23.76 9.68 10.67 9 E1a_E2a KnownJunction 1 0.00 2.96 3.61 0.00 0.00 2.33 1.68 0.00 1.79 0.00 39.22 0.00 6.82 15.01 4.45 79.55 3.83 4.27 0.00 0.00 30.89 5.39 15.54 10 I1_AR3 ActiveIntronRegion 0 0.71 1.81 2.45 1.36 4.76 0.00 0.00 11.14 8.10 2.29 1.93 27.42 23.45 0.00 9.03 21.47 2.20 3.70 0.00 4.26 1.96 0.00 12.73 11 I1_AR10 ActiveIntronRegion 1 0.00 0.00 0.06 0.00 0.00 0.00 2.02 2.81 1.24 0.00 0.00 58.99 18.29 0.00 7.11 11.07 0.00 3.70 0.00 1.86 0.00 0.00 0.95 12 ER2a ExonRegion 0 2.14 2.32 5.82 1.88 1.54 0.49 2.10 2.09 8.18 7.86 85.61 60.47 20.67 52.68 51.08 148.70 27.45 9.69 5.94 10.23 50.59 26.43 31.41 13 E2a_E3a KnownJunction 0 0.00 2.76 10.35 3.80 3.74 0.00 8.13 4.60 16.38 7.33 138.46 108.19 44.80 93.94 46.60 394.77 56.01 15.34 17.32 8.82 72.34 47.58 53.95 14 ER3a ExonRegion 0 7.19 4.33 8.40 6.54 4.72 3.40 9.61 7.08 15.51 9.55 133.68 79.37 33.40 91.66 40.52 165.81 48.74 14.98 3.42 12.32 77.24 25.48 20.56 15 E3a_E4a KnownJunction 1 17.63 12.56 5.56 1.66 3.82 7.55 5.79 4.89 17.68 6.96 145.19 80.43 12.17 89.47 33.50 125.01 61.15 15.67 4.14 3.26 90.01 28.84 20.23 16 ER4a ExonRegion 0 12.60 6.15 8.04 4.52 6.92 2.04 10.31 8.23 17.10 10.29 191.66 185.32 103.46 135.22 60.29 258.30 65.26 22.93 8.41 12.25 120.69 37.23 40.01 17 E4a_E6a KnownJunction 0 37.34 9.21 17.44 5.36 0.00 0.00 6.18 9.69 12.90 10.07 211.47 215.47 140.41 164.52 91.35 253.61 54.79 29.47 12.80 12.14 105.76 51.07 45.67 18 Ix_SR1 SilentIntronRegion 0 8.70 0.00 1.28 0.61 1.88 0.00 4.92 2.07 2.77 2.40 4.08 40.60 29.66 1.07 7.66 12.83 3.98 0.83 0.00 1.28 3.10 1.05 2.95 19 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER5b ExonRegion 0 0.00 0.00 0.00 0.01 0.00 0.00 1.65 0.00 0.76 0.00 0.80 4.75 0.04 1.25 0.90 4.98 1.37 0.00 0.00 2.65 1.86 0.10 1.22 21 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER6a ExonRegion 1 15.98 8.25 11.51 7.85 13.13 1.88 13.96 9.40 14.64 7.62 227.13 412.62 184.99 179.11 82.04 286.00 59.50 23.83 5.52 16.32 146.74 65.46 49.68 23 E6a_E7a KnownJunction 0 27.26 15.92 13.19 6.49 17.32 0.00 20.54 17.62 12.79 17.89 307.55 336.71 256.15 221.26 132.27 305.90 90.79 18.86 0.00 23.01 136.34 85.36 50.19 24 ER7a ExonRegion 0 20.74 10.11 6.59 8.41 13.97 4.77 18.68 19.36 12.41 10.08 304.10 454.77 207.77 191.48 95.45 293.62 74.30 18.53 6.82 18.32 180.68 79.53 41.20 25 E7a_E8a KnownJunction 1 25.93 0.00 14.10 8.02 7.39 0.00 15.19 19.35 7.93 13.40 237.64 618.80 192.52 182.94 93.21 408.53 70.87 14.26 4.14 14.13 151.48 86.83 32.18 26 ER8a ExonRegion 0 19.94 17.11 7.05 11.50 20.74 1.90 13.22 19.48 13.18 17.09 313.30 518.31 291.57 219.48 103.01 406.76 77.95 27.23 8.35 15.34 157.70 94.90 54.84 27 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E8a_E10a KnownJunction 0 13.26 12.37 3.19 8.89 16.13 2.33 10.82 9.12 13.22 14.16 226.22 381.72 178.40 141.45 49.32 160.30 70.41 18.32 18.54 9.01 114.23 55.48 45.75 29 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E10a_E12a KnownJunction 1 22.97 12.89 3.64 3.76 0.00 2.56 14.04 12.03 5.03 9.11 177.31 394.33 205.83 140.68 53.90 264.55 72.09 21.14 4.61 6.52 119.72 59.70 51.13 32 ER10a ExonRegion 1 17.40 15.25 4.90 8.33 10.70 1.43 14.20 15.17 12.97 15.67 271.57 501.50 257.95 191.19 66.57 267.33 92.43 22.07 18.94 9.57 149.24 71.77 62.97 33 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER12a ExonRegion 0 22.66 17.57 7.30 11.26 13.83 3.65 24.81 15.75 18.61 18.03 307.90 484.51 307.91 205.90 102.91 438.77 97.88 42.50 9.09 12.38 159.86 82.31 58.86 36 E12_Da KnownBoundary 0 73.27 36.51 18.75 21.41 26.99 14.48 51.94 22.34 27.72 22.70 483.86 741.09 567.82 357.94 238.95 702.72 160.73 38.51 9.60 28.89 262.06 149.10 104.66 37 ER12b ExonRegion 0 21.64 13.26 17.67 12.18 17.96 6.11 19.66 12.97 16.51 19.71 311.39 490.56 275.91 225.20 81.60 377.06 93.41 22.01 8.06 15.22 160.20 79.76 62.12 38 E12b_E13b KnownJunction 1 27.12 13.02 19.60 6.79 39.30 0.00 13.87 5.71 14.99 13.57 270.38 305.50 263.46 213.67 52.91 364.69 104.63 16.83 7.72 20.84 168.65 74.52 43.45 39 E12b_E14a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 11.42 31.51 0.00 12.01 0.00 11.71 13.09 0.00 0.00 3.26 8.71 0.00 8.45 40 E12c_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER12c ExonRegion 0 0.00 2.03 0.00 0.00 0.00 0.00 0.91 0.00 1.41 3.20 2.60 7.46 6.95 5.26 4.30 2.46 2.05 1.21 0.00 0.00 11.85 4.17 5.16 42 ER13a ExonRegion 0 1.68 0.74 3.98 1.08 3.59 0.00 2.05 0.43 2.44 1.17 12.61 12.30 19.08 10.22 10.22 17.56 7.35 1.72 0.14 1.74 16.33 3.65 1.07 43 E13_Ab KnownBoundary 0 3.78 0.00 9.05 4.79 11.29 0.00 4.02 0.00 3.53 3.68 19.37 12.00 26.95 0.00 6.06 16.49 9.35 2.11 0.00 3.26 17.11 2.76 0.00 44 ER13b ExonRegion 0 26.98 15.19 22.58 9.18 15.27 2.88 15.33 12.67 17.73 19.11 272.23 440.81 262.21 164.25 73.91 308.67 85.19 9.35 9.83 9.59 132.14 57.95 41.07 45 E13a_E14a KnownJunction 1 10.08 19.67 31.22 9.42 0.00 0.00 20.71 13.97 13.95 21.38 272.17 465.00 247.22 182.53 60.57 264.29 98.83 14.67 8.56 2.56 112.06 36.86 47.72 46 ER14a ExonRegion 1 18.67 18.90 14.76 5.17 16.90 1.76 24.21 26.04 25.93 17.82 334.61 518.26 322.18 220.08 72.37 398.07 83.94 26.17 5.98 12.54 143.74 79.63 60.80 47 E14_Da NovelBoundary 1 0.00 0.00 2.19 1.70 0.00 0.00 2.25 4.31 4.57 0.00 2.42 31.96 60.06 7.42 0.00 33.24 8.13 4.93 0.00 3.00 11.37 6.18 8.11 48 E14a_E15b KnownJunction 1 10.15 18.81 16.56 1.60 7.22 5.79 20.27 6.74 24.45 14.40 213.37 428.69 251.12 202.25 80.85 258.22 68.44 24.83 13.84 11.89 130.16 62.76 38.24 49 I14_AR1 ActiveIntronRegion 1 13.70 0.87 4.42 1.54 2.49 0.24 5.51 3.42 4.70 1.42 5.89 49.28 35.16 5.03 10.99 20.45 7.01 2.33 0.28 3.45 2.64 3.93 6.90 50 ER15a ExonRegion 0 6.38 2.13 0.54 1.73 4.30 0.18 2.81 1.72 2.41 0.35 8.03 29.90 16.95 3.65 5.79 20.47 3.87 3.36 0.03 0.82 14.68 5.33 6.13 51 E15_Ab KnownBoundary 0 10.22 0.00 0.00 0.00 0.00 0.00 2.25 0.00 1.56 0.00 5.00 12.60 6.66 5.36 4.45 19.57 4.02 2.57 0.00 0.00 13.59 2.94 3.59 52 ER15b ExonRegion 0 10.45 11.68 13.50 5.57 7.96 2.18 12.25 12.87 20.75 11.25 266.15 353.80 178.73 140.89 82.30 271.90 70.61 28.12 6.25 8.01 146.51 59.79 38.31 53 E15a_E16a KnownJunction 0 10.82 21.84 15.73 11.92 8.15 0.00 16.34 13.97 29.77 12.76 196.37 363.72 224.82 161.46 79.73 335.98 55.45 40.58 3.76 5.88 162.97 68.52 46.95 54 ER16a ExonRegion 0 17.72 10.07 10.66 10.52 11.26 3.68 14.24 16.61 20.49 12.52 231.19 267.86 154.61 155.09 92.41 315.08 69.65 33.76 6.80 9.76 151.48 71.09 48.36 55 E16_Da KnownBoundary 0 17.04 5.39 12.92 17.28 11.46 0.00 3.84 23.12 19.56 20.09 208.47 219.22 93.34 117.19 97.41 329.91 55.91 30.14 4.05 18.09 141.72 75.56 40.38 56 ER16b ExonRegion 0 16.08 6.20 13.35 8.82 5.30 0.92 7.55 23.13 22.29 12.21 287.65 158.23 102.91 137.25 106.20 295.61 59.38 30.20 10.17 14.83 172.69 65.99 54.24 57 E16b_E17a KnownJunction 0 19.86 13.16 26.85 10.32 4.16 4.32 11.79 29.37 23.15 6.34 303.50 161.00 169.14 148.57 104.09 304.45 62.74 38.30 22.40 5.94 175.63 47.95 54.97 58 ER17a ExonRegion 0 22.32 18.98 25.22 13.11 14.55 3.63 12.48 23.03 29.29 10.94 291.62 159.20 107.35 158.23 101.14 286.93 72.88 25.50 9.96 11.64 189.69 61.06 36.95 59 E17a_E18a KnownJunction 0 15.78 19.34 36.75 18.38 32.26 0.00 16.87 25.47 31.19 17.86 320.98 155.15 122.88 146.74 102.11 275.91 80.04 35.40 3.58 5.31 225.67 38.45 34.91 60 ER18a ExonRegion 0 24.44 15.34 24.67 15.27 19.15 4.49 18.43 15.09 28.59 24.39 301.14 210.25 153.47 199.87 113.89 384.93 79.92 28.11 9.22 12.28 195.34 66.10 63.10 61 E18a_E19a KnownJunction 0 29.63 22.04 17.89 19.28 23.94 2.73 13.34 13.84 41.93 40.37 368.46 215.02 197.23 178.41 157.61 463.72 117.16 36.27 8.47 15.79 215.17 82.05 86.73 62 E19_Aa NovelBoundary 0 3.78 5.92 9.25 3.43 3.74 2.61 3.89 16.51 1.39 1.56 22.43 38.11 28.57 12.60 9.27 39.31 4.02 0.00 4.05 3.13 8.65 8.57 3.67 63 ER19a ExonRegion 0 34.05 16.18 16.83 12.78 18.75 4.48 14.44 19.81 27.91 15.28 306.05 212.54 141.78 177.23 139.64 393.59 88.38 32.48 6.36 12.35 193.22 63.10 69.04 64 E19a_E20a KnownJunction 0 53.19 16.77 32.32 25.14 28.01 15.16 28.00 20.37 35.68 16.73 415.00 243.08 169.63 165.64 210.03 507.56 107.71 51.44 4.05 22.88 165.93 68.09 88.78 65 ER20a ExonRegion 0 88.33 19.98 37.57 22.46 29.43 6.38 18.53 32.91 32.55 21.53 309.66 269.85 165.33 178.39 208.42 377.30 73.99 22.53 10.97 12.64 127.30 77.46 52.63