Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLK Gene 0 65.90 51.10 45.75 51.54 77.35 82.25 86.47 47.76 54.01 29.40 97.87 147.61 126.60 107.27 53.73 44.48 132.48 27.13 31.01 38.12 107.06 223.61 110.78 2 335753 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 369755 Transcript 0 1.48 4.18 0.70 5.85 0.52 1.01 2.46 4.93 2.59 0.00 6.60 7.79 7.07 10.66 0.41 8.15 10.77 4.86 2.30 8.17 2.42 2.37 3.38 4 474260 Transcript 0 11.22 13.84 3.70 5.92 9.15 12.97 13.58 4.23 10.17 2.45 10.77 14.01 11.23 7.41 5.68 1.00 4.13 6.57 2.48 3.24 7.35 32.64 15.71 5 ER1a ExonRegion 1 3.69 4.75 4.64 5.83 5.76 10.50 13.16 8.25 10.88 6.35 40.88 22.39 21.16 51.63 5.73 23.38 62.61 16.08 12.42 12.15 90.09 59.64 47.02 6 E1_Da NovelBoundary 0 3.78 0.00 13.87 2.06 0.00 0.00 0.00 0.00 0.00 0.00 4.79 0.00 0.00 2.65 0.00 0.00 4.96 4.81 0.00 2.49 2.53 0.00 4.35 7 E1a_E2a KnownJunction 1 23.56 38.55 11.97 31.56 23.51 36.57 27.25 27.19 39.12 26.89 125.87 155.75 118.17 177.53 15.20 86.81 170.45 40.67 12.89 44.17 205.97 236.97 156.13 8 ER2a ExonRegion 1 12.89 16.07 18.51 24.64 27.08 45.70 67.59 34.71 68.83 33.23 161.38 184.25 130.64 160.22 25.18 69.85 222.24 47.80 36.93 61.22 167.16 287.54 181.18 9 E2a_E3a KnownJunction 0 34.30 16.51 15.79 25.04 33.87 47.76 57.01 32.33 53.76 43.70 154.25 250.28 168.17 147.80 55.13 49.65 221.41 29.68 41.32 61.10 94.46 237.28 147.17 10 ER3a ExonRegion 0 18.49 15.27 23.11 21.03 34.07 54.56 65.98 23.85 57.80 29.61 167.69 249.96 182.72 152.47 40.50 45.92 198.39 24.06 36.01 57.66 102.27 210.61 129.57 11 E3a_E4a KnownJunction 0 18.00 20.13 33.00 16.35 47.37 44.52 76.75 18.15 55.61 16.60 132.82 259.43 162.16 144.86 43.39 54.43 175.60 14.34 20.71 73.19 129.73 212.85 119.08 12 ER4a ExonRegion 1 28.25 27.21 28.11 29.74 49.77 51.57 75.55 30.66 66.12 29.71 169.67 239.51 194.07 147.12 33.38 53.70 210.51 25.19 29.58 66.78 128.95 281.64 146.60 13 E4a_E5a KnownJunction 1 24.08 42.89 36.81 25.64 42.36 20.27 96.80 29.49 69.96 31.59 139.14 288.24 154.21 196.42 38.69 85.45 209.63 20.93 46.02 63.66 142.52 253.02 135.22 14 ER5a ExonRegion 0 17.02 41.56 30.50 30.56 27.97 57.88 62.77 31.11 63.33 24.96 175.66 209.36 175.78 123.46 32.95 74.87 223.29 25.36 32.86 62.05 128.15 275.60 161.68 15 E5a_E6a KnownJunction 0 20.74 53.54 27.20 46.28 34.89 77.97 65.45 48.63 62.59 23.18 214.53 108.34 181.81 117.90 49.57 68.19 250.40 25.62 19.01 82.33 114.54 291.10 147.68 16 ER6a ExonRegion 1 32.27 36.27 44.30 39.62 36.27 63.75 84.01 36.20 66.27 22.83 150.69 225.20 212.64 175.81 31.66 83.17 246.75 39.61 25.40 57.52 162.92 317.29 151.37 17 E6a_E7a KnownJunction 1 38.45 26.90 44.59 41.39 33.28 72.34 90.67 32.20 58.85 19.61 143.72 220.12 273.20 244.39 51.18 90.32 204.67 81.00 12.80 37.71 201.46 269.55 167.31 18 ER7a ExonRegion 1 39.28 34.25 41.96 35.27 37.88 73.67 72.33 36.13 63.13 22.22 158.57 195.20 182.05 189.17 27.77 69.23 226.03 61.07 33.64 60.22 229.00 287.63 187.59 19 E7a_E8a KnownJunction 1 65.34 70.45 46.63 36.83 48.73 72.12 152.67 34.63 66.64 32.26 178.20 222.22 105.51 181.18 37.21 68.02 282.94 56.58 48.57 62.00 280.53 301.51 204.44 20 E8_Aa NovelBoundary 0 31.04 15.06 2.72 5.13 4.07 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 2.59 0.00 4.35 21 ER8a ExonRegion 1 59.41 62.35 42.52 36.84 47.52 50.37 80.78 30.50 61.47 23.97 155.98 214.53 204.18 192.26 30.54 78.84 232.47 52.11 23.63 48.36 240.39 296.75 177.50 22 E8a_E9a KnownJunction 1 44.90 99.52 47.90 47.75 68.42 66.72 114.56 43.25 85.47 32.77 197.00 201.67 209.56 169.58 33.13 64.60 234.50 61.43 47.53 89.23 246.92 406.65 214.77 23 E8a_E10a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.03 0.00 0.00 2.21 0.00 0.00 0.00 4.70 4.10 9.26 0.00 0.00 0.00 0.00 11.02 11.27 24 I8 Intron 0 13.85 3.07 2.14 1.36 4.49 1.23 4.00 1.30 0.93 0.29 0.00 4.44 2.08 0.42 2.06 1.50 1.66 0.31 0.00 2.14 0.37 0.70 0.99 25 I8_SR1 SilentIntronRegion 0 13.94 3.09 2.16 1.37 4.52 1.24 4.02 1.30 0.93 0.29 0.00 4.47 2.10 0.42 2.08 1.51 1.67 0.31 0.00 2.15 0.37 0.70 0.99 26 ER9a ExonRegion 0 73.52 52.90 55.88 60.89 82.53 84.28 103.39 45.50 64.99 33.75 148.86 241.54 230.26 160.16 49.73 61.65 212.37 27.41 36.49 59.79 134.31 326.91 153.38 27 E9a_E10a KnownJunction 0 198.41 159.05 45.33 92.20 161.29 195.06 199.92 74.63 79.74 43.44 168.67 394.93 317.51 152.57 60.20 63.74 214.31 11.90 53.08 76.19 65.79 586.37 141.62 28 ER10a ExonRegion 1 68.18 108.46 77.35 79.38 128.29 105.44 109.35 69.11 83.03 46.22 158.22 339.05 403.63 174.39 84.98 83.72 200.50 30.68 43.48 76.82 101.47 424.59 160.64 29 E10a_E11a KnownJunction 1 49.27 118.73 70.02 95.59 76.15 109.20 113.98 67.81 79.83 37.69 147.67 209.47 512.95 167.34 64.53 62.80 233.66 28.93 38.97 70.88 155.56 338.38 171.75 30 ER11a ExonRegion 0 61.82 118.70 76.32 91.81 119.05 115.22 116.85 64.51 86.95 46.14 194.30 387.38 449.79 222.48 90.59 100.09 289.28 54.11 60.14 68.89 220.98 417.83 244.81 31 E11a_E12a KnownJunction 0 99.43 90.31 104.08 103.12 122.24 138.78 129.57 56.19 79.17 46.15 160.94 330.71 380.98 241.33 89.00 136.37 271.25 48.09 49.79 55.42 268.18 300.23 251.65 32 E12_Ab NovelBoundary 1 90.09 100.31 87.73 82.04 56.45 84.04 115.79 64.65 53.70 38.71 142.25 188.16 297.38 219.32 41.78 95.87 227.68 30.47 39.81 49.60 236.05 258.22 244.05 33 ER12a ExonRegion 0 77.25 94.10 89.51 94.16 85.50 116.78 112.06 65.37 74.05 48.69 163.59 290.66 340.24 243.32 73.85 124.42 276.53 47.54 43.87 53.48 268.45 304.00 242.54 34 ER12b ExonRegion 0 80.64 115.08 61.11 82.23 100.93 139.25 125.87 59.56 65.18 42.15 193.07 292.24 381.76 232.50 99.05 91.16 289.87 62.22 57.07 62.13 278.83 353.20 252.16 35 E12a_E13a KnownJunction 0 3.78 2.57 1.74 5.13 0.00 0.00 4.28 8.63 0.00 0.00 7.00 0.00 0.00 7.18 0.00 15.38 4.77 4.15 3.67 0.00 0.00 0.00 3.33 36 E12a_E14a KnownJunction 0 69.94 96.69 61.23 57.50 138.20 166.72 154.17 67.11 65.13 35.86 183.63 183.81 190.90 210.61 93.21 94.16 298.27 58.03 41.41 59.25 314.82 250.08 277.94 37 ER13a ExonRegion 0 0.66 9.97 0.37 6.81 1.55 3.04 3.09 2.83 3.59 0.00 10.85 11.22 14.73 7.67 1.22 9.08 14.62 5.54 3.22 11.53 7.27 7.10 3.06 38 E13a_E14a KnownJunction 0 0.00 0.00 0.00 5.59 0.00 0.00 0.00 3.33 4.20 0.00 1.95 12.15 6.49 17.13 0.00 0.00 12.90 4.89 0.00 12.98 0.00 0.00 3.76 39 ER14a ExonRegion 0 73.13 72.10 53.47 72.00 92.29 144.60 123.64 70.57 91.41 40.30 245.72 281.22 314.95 254.00 110.52 100.05 322.47 84.67 70.08 63.13 310.01 355.78 255.35 40 E14a_E15a KnownJunction 0 106.17 42.36 86.10 89.77 82.43 188.36 156.16 102.19 106.74 57.73 214.79 326.51 352.25 228.62 119.17 113.56 328.94 93.85 65.70 92.68 333.60 351.73 302.36 41 ER15a ExonRegion 0 51.22 60.39 70.53 90.33 104.61 177.41 142.06 90.68 104.22 40.36 204.95 331.33 301.70 281.95 127.45 128.09 309.23 92.95 91.36 77.62 339.74 422.12 317.51 42 E15_Da KnownBoundary 0 10.52 16.25 3.10 3.73 8.66 2.90 11.92 2.34 16.49 1.16 4.63 39.31 38.47 16.01 9.64 4.27 9.35 10.61 13.08 5.37 23.91 28.78 21.26 43 E15a_E16a KnownJunction 0 68.53 60.91 58.01 88.40 131.41 197.39 184.11 79.27 80.70 46.18 249.27 228.22 196.42 311.73 133.38 100.49 378.03 57.58 57.23 82.84 459.07 300.17 207.43 44 ER15b ExonRegion 0 11.22 13.84 3.70 5.92 9.15 12.97 13.58 4.23 10.17 2.45 10.77 14.01 11.23 7.41 5.68 1.00 4.13 6.57 2.48 3.24 7.35 32.64 15.71 45 E15_Db NovelBoundary 0 42.08 22.36 10.44 11.42 11.80 8.40 39.22 10.43 15.94 9.05 0.00 12.60 27.27 7.59 4.45 4.36 7.85 2.45 3.86 8.18 5.37 74.77 11.61 46 I15 Intron 0 13.36 4.28 2.07 6.25 11.70 12.17 15.65 6.26 7.75 2.77 9.70 2.93 16.04 11.37 7.68 5.29 13.36 6.10 5.67 3.44 5.00 28.34 11.89 47 I15_AR1 ActiveIntronRegion 0 13.45 4.31 2.08 6.29 11.77 12.25 15.75 6.30 7.79 2.78 9.76 2.95 16.14 11.44 7.73 5.33 13.45 6.14 5.71 3.47 5.03 28.52 11.95 48 E16_Aa NovelBoundary 0 33.86 9.27 13.10 9.02 53.31 31.57 12.90 11.87 5.93 6.55 14.58 5.85 21.91 17.72 4.45 8.72 27.58 2.57 0.00 8.31 14.52 14.70 11.44 49 ER16a ExonRegion 0 74.90 65.49 61.50 74.67 101.34 125.83 119.92 74.68 74.03 33.87 166.35 225.82 163.90 187.37 89.37 90.44 237.66 54.96 50.38 62.22 269.12 260.18 180.78 50 E16a_E17a KnownJunction 0 120.32 44.60 59.70 54.31 128.01 159.74 125.29 73.40 40.83 23.29 170.36 163.25 161.35 195.01 114.10 101.51 216.83 76.23 59.48 72.93 248.90 246.65 232.10 51 ER17a ExonRegion 0 97.54 53.92 62.33 62.44 104.21 118.05 111.30 72.49 66.02 27.58 150.03 173.97 127.90 190.10 101.11 92.44 219.69 72.97 76.30 61.09 288.21 269.09 204.19 52 E17a_E18a KnownJunction 0 109.28 57.82 59.67 49.21 97.96 90.69 129.40 58.61 58.25 19.53 149.88 247.88 107.14 168.87 86.66 85.87 239.74 78.93 57.04 76.70 217.95 238.63 208.71 53 ER18a ExonRegion 0 89.56 85.25 44.62 49.76 111.30 139.08 119.11 56.83 64.94 29.01 171.91 195.59 86.19 169.71 102.33 87.60 236.68 70.85 64.01 45.80 205.52 279.65 178.52 54 E18a_E19a KnownJunction 1 139.43 125.90 55.20 56.47 193.97 173.59 178.42 57.09 74.65 25.73 183.05 213.67 39.45 162.64 89.99 95.45 244.97 53.06 49.22 59.57 179.03 305.68 174.23 55 ER19a ExonRegion 0 85.11 56.07 50.61 57.43 94.94 91.80 92.55 56.39 51.80 32.29 55.98 92.52 57.82 60.37 59.71 23.54 64.91 16.41 25.35 24.76 49.15 181.18 68.74