Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 COX15 Gene 0 91.21 192.14 102.60 93.71 84.79 94.25 76.04 70.23 73.26 59.88 145.68 158.21 113.17 168.32 147.08 141.98 135.69 98.81 103.82 121.78 76.63 48.79 49.23 2 485884 Transcript 1 11.64 22.57 8.70 8.31 16.32 50.43 36.54 4.15 5.93 6.08 89.30 1.73 0.00 85.75 44.68 98.38 91.76 20.33 50.65 15.11 46.94 13.96 16.74 3 16171 Transcript 0 57.33 111.76 77.91 70.81 75.04 77.58 67.49 61.76 58.86 52.46 132.98 159.84 98.54 168.44 134.56 121.28 118.00 67.21 98.45 110.28 55.46 47.75 44.75 4 370483 Transcript 0 81.68 180.74 81.02 74.04 66.53 58.50 49.83 47.42 45.76 38.38 62.58 110.91 77.83 61.32 88.85 70.83 57.15 38.80 46.92 69.85 25.89 27.49 23.40 5 497381 Transcript 0 16.55 24.97 35.38 30.32 16.50 25.64 15.91 19.87 23.45 13.01 26.85 33.50 24.79 23.89 16.57 27.69 27.70 49.87 33.41 32.04 23.20 29.90 31.88 6 ER1a ExonRegion 1 11.64 22.57 8.70 8.31 16.32 50.43 36.54 4.15 5.93 6.08 89.30 1.73 0.00 85.75 44.68 98.38 91.76 20.33 50.65 15.11 46.94 13.96 16.74 7 ER1b ExonRegion 1 31.00 45.00 38.15 21.93 28.28 125.01 77.15 39.03 36.65 34.39 148.04 16.76 20.35 105.09 74.43 102.27 135.98 67.00 88.41 105.65 112.60 31.58 29.77 8 E1b_E2a KnownJunction 1 0.00 3.35 27.62 14.68 0.00 6.98 1.81 24.73 26.53 31.03 247.43 13.05 13.64 39.91 30.53 27.77 228.80 49.87 16.75 54.46 174.40 5.51 7.60 9 ER1c ExonRegion 1 0.00 4.07 24.51 12.27 0.00 14.67 2.65 31.11 25.94 33.26 253.21 4.33 9.38 47.10 37.72 29.72 211.26 46.19 12.74 51.06 176.30 6.25 5.87 10 ER2a ExonRegion 1 13.42 19.88 57.18 33.46 9.37 26.80 13.40 45.84 60.40 37.16 199.30 25.33 27.73 243.10 150.16 213.99 190.22 187.47 149.45 148.50 144.23 44.03 74.62 11 E2a_E3a KnownJunction 0 20.60 70.97 80.45 34.09 28.10 178.02 108.91 58.00 53.59 54.40 153.83 45.46 54.22 155.45 80.10 133.38 178.87 93.23 104.47 78.87 115.03 45.13 55.57 12 ER2b ExonRegion 1 17.03 49.77 63.25 26.80 27.90 128.98 72.57 40.58 50.99 42.44 133.09 43.91 45.34 116.32 69.63 89.31 183.28 104.27 85.25 57.45 97.38 26.69 38.04 13 ER3a ExonRegion 0 41.64 114.57 71.54 63.19 48.10 266.39 136.59 65.22 75.86 66.33 269.76 106.83 97.31 263.61 144.54 176.01 232.57 147.59 133.27 142.36 123.57 44.50 59.35 14 E3_Da NovelBoundary 0 42.16 12.50 4.26 8.59 8.40 9.54 41.16 19.67 11.14 3.33 9.32 6.30 25.32 11.77 4.45 11.02 35.06 7.05 25.60 8.50 10.81 5.76 19.29 15 E3a_E4a KnownJunction 1 73.27 121.82 83.62 87.00 43.29 74.90 82.81 79.64 81.22 73.98 314.71 215.17 147.72 378.07 162.68 277.19 289.57 189.23 225.79 174.05 124.73 50.40 120.02 16 E4_Aa NovelBoundary 0 3.78 6.45 0.00 12.92 24.28 2.33 31.66 7.15 10.82 1.29 4.74 6.30 21.75 19.78 4.45 28.03 16.64 10.90 4.42 11.38 8.65 7.78 0.00 17 ER4a ExonRegion 0 36.00 61.22 90.09 70.30 33.68 69.11 48.16 75.40 92.65 68.00 291.28 189.08 145.64 318.89 164.47 261.90 234.38 242.40 165.08 164.91 149.48 56.10 82.49 18 E4a_E5a KnownJunction 0 20.89 106.49 123.56 84.60 19.02 108.74 45.49 119.44 117.30 77.55 315.87 152.75 153.40 377.54 163.79 188.92 271.25 246.65 158.22 241.16 216.16 39.25 62.32 19 ER5a ExonRegion 0 42.14 93.51 104.91 79.11 64.58 106.68 73.77 86.40 106.29 75.01 278.29 167.87 183.61 325.22 176.98 291.82 257.27 249.66 185.15 204.62 207.28 53.08 93.68 20 E5a_E6a KnownJunction 0 90.16 185.62 118.06 115.94 61.88 134.52 152.58 115.13 121.32 86.20 311.34 253.13 208.59 414.15 323.38 403.31 264.42 347.42 307.30 364.65 312.04 107.53 98.77 21 ER6a ExonRegion 0 28.39 68.62 81.19 78.10 33.15 82.41 50.50 58.14 70.60 63.82 216.81 142.24 131.66 287.07 181.79 214.79 235.65 175.74 116.69 173.12 183.18 58.52 60.92 22 E6_Da NovelBoundary 1 6.89 16.90 27.47 23.11 0.00 9.31 10.11 1.56 30.93 7.09 17.48 6.30 67.85 23.13 4.45 48.11 14.31 24.46 27.20 32.73 23.48 3.12 11.10 23 E6a_E7a KnownJunction 1 23.49 60.06 62.71 30.00 33.45 72.69 25.66 46.99 50.55 47.25 138.14 131.29 230.83 297.84 142.65 154.66 144.27 95.30 98.07 153.02 99.15 19.04 61.72 24 Ix Intron 0 19.84 25.19 16.33 24.08 24.52 27.17 23.74 11.04 20.26 7.23 10.74 29.21 29.66 22.22 16.82 18.88 17.82 19.99 23.39 25.75 12.13 15.98 16.78 25 Ix_SR1 SilentIntronRegion 0 11.81 15.35 9.40 16.83 16.49 30.81 20.87 7.84 14.67 4.80 9.22 25.93 28.05 19.65 14.45 15.76 13.58 22.58 22.54 19.19 11.54 7.77 10.99 26 Ix_AR1 ActiveIntronRegion 0 29.15 36.60 24.38 32.52 33.86 23.11 27.15 14.76 26.76 10.06 12.54 33.11 31.66 25.28 19.63 22.55 22.79 17.08 24.48 33.41 12.86 25.51 23.53 27 E7_Aa NovelBoundary 0 25.93 67.42 29.39 70.75 52.29 55.08 52.02 9.12 40.94 18.62 19.37 31.06 39.45 26.02 17.80 30.76 17.86 25.54 23.15 46.15 24.59 32.39 17.84 28 ER7a ExonRegion 0 69.67 107.83 82.80 68.07 73.92 99.14 63.32 50.99 63.37 63.77 210.03 138.15 155.50 268.76 186.35 192.56 208.08 143.03 118.25 121.34 123.92 55.33 69.46 29 E7_Da NovelBoundary 0 31.34 21.38 49.61 64.59 26.83 12.72 20.76 17.83 34.66 24.23 23.27 18.61 32.79 28.90 33.62 60.75 55.35 53.06 43.48 38.61 28.60 36.99 20.06 30 E7a_E8b KnownJunction 0 30.45 62.36 66.97 34.46 28.61 55.71 29.85 35.57 48.81 50.12 147.04 100.53 72.88 201.25 179.25 99.29 119.87 98.87 45.93 57.72 66.90 40.23 16.39 31 Ix Intron 0 23.26 37.50 31.38 37.67 25.45 28.02 25.54 22.19 24.03 13.32 18.46 20.87 24.78 22.65 15.65 27.79 21.87 36.97 26.69 42.05 26.44 20.39 25.05 32 Ix_AR2 ActiveIntronRegion 0 19.24 26.26 22.43 30.19 19.20 11.94 20.27 6.79 24.88 8.85 17.22 11.88 17.20 14.67 13.62 26.34 21.27 27.58 29.25 31.55 23.10 11.79 26.81 33 Ix_SR1 SilentIntronRegion 0 23.82 39.02 32.59 38.70 26.30 30.18 26.26 24.25 23.93 13.93 18.64 22.08 25.81 23.73 15.93 28.01 21.96 38.25 26.37 43.47 26.90 21.55 24.84 34 E8_Aa NovelBoundary 0 14.52 19.34 32.14 46.08 18.76 22.37 16.43 25.30 32.18 20.15 10.32 49.52 15.10 16.66 0.00 27.17 28.05 42.20 38.68 27.36 8.53 19.66 31.76 35 ER8a ExonRegion 0 16.55 24.97 35.38 30.32 16.50 25.64 15.91 19.87 23.45 13.01 26.85 33.50 24.79 23.89 16.57 27.69 27.70 49.87 33.41 32.04 23.20 29.90 31.88 36 E8_Ab KnownBoundary 0 3.70 34.14 20.73 43.55 24.87 38.05 10.38 20.62 27.26 9.91 5.37 36.61 0.00 31.08 0.00 23.67 17.48 26.28 32.19 41.61 25.39 23.21 22.96 37 ER8b ExonRegion 0 46.75 77.55 65.78 59.34 72.84 91.24 63.00 53.03 58.91 68.13 197.62 93.91 90.27 242.73 161.08 172.94 209.80 136.65 102.47 119.92 114.63 52.92 48.52 38 E8_Da NovelBoundary 0 31.34 18.75 16.50 20.51 15.96 4.77 20.84 18.52 9.23 14.99 6.42 45.16 26.46 21.66 21.76 28.54 30.29 37.10 8.28 18.15 9.08 18.19 19.04 39 E8a_E9a KnownJunction 1 33.12 38.68 36.46 35.69 59.93 25.78 33.08 36.72 48.23 44.86 184.99 56.87 39.28 261.64 142.04 122.28 185.51 135.39 89.13 123.30 99.65 23.45 24.76 40 E8a_E10a KnownJunction 0 0.00 3.35 12.74 3.30 3.57 8.52 0.00 4.03 0.00 4.67 15.58 11.40 14.93 2.41 10.75 16.75 9.07 3.56 0.00 15.79 2.59 2.39 4.10 41 Ix Intron 0 8.65 8.31 14.92 14.33 13.91 9.76 18.36 5.74 5.24 5.71 10.29 29.90 36.17 15.89 10.22 12.88 13.89 8.65 11.04 6.32 5.73 15.47 14.54 42 Ix_AR1 ActiveIntronRegion 0 10.10 9.70 19.83 19.05 17.61 12.07 23.74 7.63 6.96 7.59 12.72 35.70 46.16 19.13 13.59 17.11 16.83 11.49 14.67 7.70 5.80 20.57 18.36 43 E9_Aa NovelBoundary 0 3.41 11.97 26.73 22.67 12.31 8.35 10.73 11.09 12.62 4.81 11.58 24.61 6.82 16.95 5.44 24.35 17.30 22.59 11.95 6.01 6.12 19.90 24.07 44 ER9a ExonRegion 1 29.73 53.75 58.84 34.11 45.09 46.47 22.84 36.68 43.25 39.46 159.39 34.18 51.10 232.06 145.02 130.02 165.24 110.98 95.51 96.00 92.62 28.30 38.53 45 E9_Da KnownBoundary 0 40.97 94.59 84.30 57.27 50.76 32.71 39.57 47.44 59.78 51.66 166.52 67.52 92.85 252.46 212.99 103.31 175.03 159.72 104.00 129.50 122.57 20.70 43.54 46 ER9b ExonRegion 0 57.33 111.76 77.91 70.81 75.04 77.58 67.49 61.76 58.86 52.46 132.98 159.84 98.54 168.44 134.56 121.28 118.00 67.21 98.45 110.28 55.46 47.75 44.75 47 E9_Db NovelBoundary 0 36.97 210.29 127.55 157.12 92.28 86.94 96.67 93.53 113.25 100.54 133.45 218.02 138.14 162.52 119.04 135.26 137.82 61.60 159.35 178.07 16.99 82.30 57.36 48 E10_Aa NovelBoundary 1 81.57 198.91 89.83 93.49 119.02 60.08 66.38 81.04 68.14 53.70 132.67 241.13 222.06 121.26 102.23 71.86 124.92 14.55 29.55 107.38 22.67 86.09 44.39 49 ER10a ExonRegion 0 163.36 358.12 149.29 144.78 129.50 108.49 99.65 90.82 91.52 72.08 109.57 210.42 140.73 120.22 166.95 124.92 105.23 74.04 93.84 123.91 49.19 52.60 42.69