Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-119K6.2 Gene 0 1.00 7.72 9.53 5.30 6.56 2.03 17.17 9.16 2.91 3.38 2.45 8.92 5.82 3.58 5.22 8.46 8.61 11.70 4.28 15.31 0.00 0.00 1.16 2 432120 Transcript 0 1.04 8.01 9.87 5.50 6.76 2.11 17.78 9.49 3.02 3.50 2.54 9.20 6.05 3.65 5.41 8.78 8.95 12.14 4.45 15.86 0.00 0.00 1.21 3 ER1a ExonRegion 0 3.11 23.99 29.52 16.49 20.14 6.33 53.21 28.38 9.05 10.50 7.62 27.42 18.15 10.79 16.20 26.32 26.84 36.37 13.34 47.50 0.00 0.00 3.62 4 E1_Da NovelBoundary 0 8.30 67.62 35.01 24.21 17.91 0.00 27.47 42.84 11.00 13.54 11.85 6.30 32.30 7.24 23.24 14.95 30.95 34.61 9.13 48.45 0.00 0.00 0.00 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 3.26 35.13 14.23 8.40 11.72 1.50 32.11 17.60 8.33 7.23 5.77 16.04 21.13 5.05 13.86 13.58 16.83 10.89 7.05 32.35 0.53 0.70 1.13 7 Ix_SR1 SilentIntronRegion 0 3.26 35.16 14.25 8.41 11.73 1.50 32.14 17.62 8.33 7.24 5.77 16.05 21.15 5.05 13.87 13.60 16.85 10.90 7.06 32.38 0.53 0.70 1.13 8 Ix Intron 0 2.86 12.23 10.16 8.22 8.32 4.65 34.71 20.02 11.44 8.04 8.93 22.01 21.51 7.15 6.90 19.33 24.30 12.05 7.17 36.46 1.08 2.47 2.28 9 Ix_SR1 SilentIntronRegion 0 2.86 12.26 10.19 8.24 8.33 4.66 34.79 20.06 11.47 8.06 8.95 22.06 21.56 7.17 6.91 19.37 24.36 12.08 7.18 36.54 1.08 2.48 2.29 10 Ix Intron 1 2.02 9.41 11.41 7.01 12.58 5.53 47.48 32.75 14.20 9.55 12.50 25.73 25.06 5.79 8.45 15.94 39.30 9.82 11.70 36.27 0.00 4.13 3.88 11 Ix_SR1 SilentIntronRegion 0 2.02 9.43 11.42 7.02 12.60 5.54 47.55 32.79 14.22 9.56 12.52 25.77 25.09 5.80 8.47 15.97 39.35 9.84 11.72 36.33 0.00 4.14 3.89 12 Ix Intron 0 7.99 23.48 18.24 10.14 14.21 5.51 45.83 37.60 16.31 12.47 8.82 22.17 23.41 6.34 14.19 17.66 22.08 11.21 9.57 30.05 0.45 2.07 2.26 13 Ix_SR1 SilentIntronRegion 0 2.82 20.63 13.34 8.97 12.65 2.58 46.94 28.55 17.65 7.14 7.65 20.16 17.05 4.88 8.66 12.44 15.99 6.40 9.15 22.80 0.00 1.59 4.10 14 Ix_AR1 ActiveIntronRegion 0 2.19 16.20 15.64 13.69 11.06 4.13 45.75 51.79 23.67 20.34 9.30 33.81 32.32 5.48 14.63 14.49 20.57 7.14 7.10 37.54 0.65 1.17 2.59 15 Ix_SR2 SilentIntronRegion 0 10.73 26.42 19.86 9.11 15.53 6.42 45.76 34.09 13.61 10.56 8.84 18.50 21.30 6.86 14.86 19.53 23.50 13.31 10.50 28.56 0.44 2.45 1.88 16 Ix Intron 0 13.87 41.25 25.18 21.71 41.17 28.25 140.44 53.59 42.73 26.13 41.44 89.23 55.58 25.22 41.94 52.32 84.80 33.82 31.99 111.38 1.96 11.21 6.65 17 Ix_AR1 ActiveIntronRegion 0 11.62 32.68 32.25 28.12 32.58 26.55 151.79 73.98 59.30 32.36 48.44 136.86 68.44 28.34 39.53 64.33 122.65 45.64 41.31 152.35 2.10 12.77 6.78 18 Ix_SR1 SilentIntronRegion 0 14.41 28.37 7.58 4.39 29.77 21.32 69.05 10.27 8.26 5.96 22.79 25.81 37.99 21.53 42.40 21.22 36.19 11.48 13.23 46.30 1.83 5.54 4.88 19 Ix_AR3 ActiveIntronRegion 0 25.06 104.52 37.02 20.34 106.63 44.89 280.70 65.19 36.28 27.23 54.62 56.39 35.84 22.70 66.73 90.41 69.40 45.65 50.81 115.16 1.39 15.92 10.01 20 Ix_AR4 ActiveIntronRegion 0 15.72 60.99 25.10 27.96 58.11 37.07 155.82 51.19 45.59 36.02 42.90 54.00 51.76 22.82 40.02 47.75 50.74 26.82 24.66 84.23 2.01 12.98 7.66 21 Ix Intron 1 39.92 126.16 67.53 58.74 83.00 46.38 182.40 142.16 69.27 57.55 62.74 93.82 83.12 40.11 90.99 91.64 87.17 67.69 41.40 118.41 4.41 20.58 14.91 22 Ix_SR1 SilentIntronRegion 0 12.38 31.07 29.93 17.92 39.00 13.15 109.86 83.00 24.31 38.68 19.78 64.67 41.31 26.71 49.94 42.37 30.06 14.78 16.88 63.60 0.00 11.08 2.75 23 Ix_AR1 ActiveIntronRegion 0 49.08 138.89 62.57 57.78 84.42 33.10 180.19 158.08 79.94 62.57 43.24 113.13 95.51 34.49 91.39 79.36 62.36 41.11 32.25 113.81 2.56 24.24 10.28 24 Ix_SR2 SilentIntronRegion 0 34.09 260.65 23.20 21.81 32.32 29.53 68.41 46.65 19.73 11.47 58.37 56.23 43.14 26.86 41.34 53.85 84.17 42.52 29.93 39.98 1.48 5.59 9.85 25 Ix_AR2 ActiveIntronRegion 0 35.71 105.08 81.39 68.53 93.11 62.75 207.25 148.15 71.64 61.77 83.37 86.00 82.45 47.90 101.55 111.69 113.29 98.00 52.82 138.48 6.76 20.57 20.55 26 E2_Aa NovelBoundary 0 295.61 267.06 304.99 312.91 251.36 224.08 401.57 381.25 387.76 300.16 164.52 56.72 66.88 71.40 160.08 338.89 207.29 597.38 249.89 263.08 120.22 144.76 188.74 27 ER2a ExonRegion 0 0.01 0.03 0.08 0.01 0.14 0.00 0.14 0.08 0.01 0.01 0.00 0.18 0.00 0.17 0.03 0.02 0.00 0.04 0.00 0.10 0.00 0.00 0.00