Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-149I23.1 Gene 0 7.78 15.65 7.33 10.10 6.27 5.21 9.14 4.63 8.77 3.79 0.97 1.65 1.81 1.98 1.74 1.87 1.52 18.79 12.92 26.16 2.02 0.70 2.58 2 444849 Transcript 0 3.61 9.72 3.16 5.26 2.57 3.66 4.25 1.99 4.77 4.17 0.89 1.90 4.10 4.75 1.74 4.17 1.14 8.05 11.83 15.56 1.54 0.00 1.64 3 354541 Transcript 0 8.47 13.44 9.38 8.60 7.35 3.55 10.23 4.71 3.39 3.41 1.15 1.06 1.21 1.37 2.48 1.77 1.47 13.87 6.15 20.74 2.45 2.04 3.28 4 448897 Transcript 0 0.00 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 437032 Transcript 0 2.71 8.12 3.24 5.64 1.72 2.44 3.61 1.66 5.80 1.01 0.00 0.43 0.38 0.15 0.00 0.00 0.33 8.97 6.28 12.49 0.22 0.00 0.43 6 ER1a ExonRegion 0 5.50 13.76 7.22 9.54 5.99 3.97 5.14 4.39 10.93 4.03 1.42 3.42 0.00 0.86 0.00 1.18 1.31 15.54 7.63 22.30 0.39 0.00 1.16 7 E1_Ab KnownBoundary 0 3.78 25.52 1.51 3.60 7.98 5.62 6.76 9.36 16.72 5.45 5.11 0.00 0.00 3.00 0.00 0.00 0.00 25.29 16.19 12.21 3.15 0.00 0.00 8 ER1b ExonRegion 0 1.56 17.11 0.65 12.11 7.00 2.53 2.88 8.79 18.20 6.44 3.24 0.00 0.00 1.19 0.00 0.00 0.00 25.27 17.71 15.52 3.31 0.00 0.00 9 E1_Ac KnownBoundary 0 0.00 3.35 0.00 9.99 0.00 0.00 0.00 2.22 1.74 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 4.80 2.62 0.00 0.00 0.00 10 E1_Ad KnownBoundary 0 2.96 11.64 3.81 7.42 8.06 2.90 2.25 3.86 8.56 4.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.23 9.04 12.72 0.00 0.00 0.00 11 ER1c ExonRegion 0 2.12 12.49 5.43 15.19 6.50 1.83 1.32 8.64 18.35 6.55 0.28 0.00 0.00 0.93 0.00 0.00 0.00 26.66 20.48 19.15 2.20 0.00 0.00 12 ER1d ExonRegion 0 2.19 7.85 11.58 10.33 6.83 2.65 0.97 5.31 8.63 4.95 0.00 2.60 0.00 1.13 0.00 0.03 1.98 18.72 12.67 33.17 0.54 0.00 0.00 13 E1_Da NovelBoundary 0 0.00 8.75 4.67 8.12 7.30 9.88 12.28 7.31 20.14 5.18 2.68 0.00 0.00 0.00 0.00 0.00 0.00 19.40 17.79 24.99 0.00 0.00 3.84 14 E1a_E2a KnownJunction 0 0.00 0.00 0.00 1.43 0.00 0.00 2.21 0.00 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1a_E3a KnownJunction 0 2.74 10.00 10.76 5.49 4.16 0.00 0.00 2.55 0.00 2.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.05 0.00 11.70 0.00 0.00 0.00 16 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E1a_E5a KnownJunction 0 0.00 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 Ix_AR1 ActiveIntronRegion 0 2.53 15.70 1.46 3.87 5.33 5.85 3.65 1.03 3.40 4.48 0.77 0.00 0.00 1.18 0.00 0.00 0.00 13.02 5.08 19.73 0.00 0.00 0.00 19 E2_Aa NovelBoundary 0 10.74 14.93 6.06 9.56 8.66 5.79 6.76 2.38 11.78 7.87 6.42 0.00 0.00 0.00 0.00 0.00 0.00 19.52 9.32 25.31 0.00 0.00 3.67 20 ER2a ExonRegion 0 5.43 16.25 6.47 9.85 3.43 4.88 5.01 3.31 9.87 2.02 0.00 0.85 0.76 0.29 0.00 0.00 0.65 17.94 12.57 24.98 0.43 0.00 0.87 21 E2_Da NovelBoundary 0 0.00 12.63 5.03 11.55 32.09 0.00 6.45 0.00 7.20 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 9.32 20.39 0.00 0.00 0.00 22 E3_Aa NovelBoundary 0 55.57 73.74 88.88 96.46 51.27 37.25 67.75 78.86 116.87 54.72 0.00 0.00 6.66 2.47 11.74 13.07 8.42 104.17 49.98 89.48 17.42 2.76 20.06 23 ER3a ExonRegion 0 22.66 24.59 14.15 16.19 17.89 10.65 30.70 9.99 10.16 7.38 3.44 3.18 3.63 4.12 7.45 5.31 4.41 31.98 18.46 44.50 7.35 3.62 9.84 24 E3_Da NovelBoundary 0 7.11 3.29 23.36 42.72 7.39 2.90 3.67 7.97 25.49 15.28 0.00 0.00 0.00 2.65 0.00 0.00 0.00 48.54 9.22 34.45 2.59 0.00 7.77 25 E3a_E5a KnownJunction 0 0.00 5.72 3.22 4.13 0.00 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 6.01 0.00 2.51 0.00 26 E4_Aa NovelBoundary 0 127.73 63.74 275.80 362.29 92.28 45.43 143.44 376.65 416.92 309.13 54.01 43.66 21.59 26.72 14.96 75.28 69.47 279.27 68.43 134.93 41.64 16.41 46.86 27 ER4a ExonRegion 0 5.34 15.40 2.27 6.24 1.71 7.01 7.60 1.58 3.37 8.49 1.23 2.27 12.31 13.40 5.22 11.33 2.10 8.62 27.87 24.39 4.21 0.00 3.74 28 E4_Da NovelBoundary 0 53.64 38.09 42.43 40.99 11.38 17.15 18.11 35.32 56.91 35.27 2.58 21.16 0.00 4.59 0.00 4.36 0.00 118.02 78.87 48.00 0.00 2.39 0.00 29 ER5a ExonRegion 0 0.78 5.15 1.43 2.89 0.00 0.00 0.49 1.04 0.80 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 7.14 0.00 3.57 0.00 0.15 0.00