Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-165M8.1 Gene 0 2.92 7.70 8.67 8.15 6.13 7.84 3.96 5.31 7.52 4.40 1.39 3.05 2.05 2.27 3.75 1.07 1.87 9.93 10.55 16.11 2.50 0.32 1.39 2 456375 Transcript 0 2.38 5.31 5.40 3.76 4.43 3.07 3.47 2.02 3.48 1.89 2.12 3.00 2.77 2.85 6.43 1.20 1.89 5.04 10.71 8.66 4.04 0.28 1.22 3 438248 Transcript 0 1.47 3.29 1.71 4.10 3.64 3.50 0.83 2.16 3.81 1.29 0.20 1.11 0.31 0.34 1.39 0.24 0.90 3.87 2.66 7.42 0.80 0.06 1.25 4 415212 Transcript 0 1.83 7.13 13.67 4.74 6.37 16.19 13.85 5.58 7.47 6.82 1.53 1.01 0.36 2.65 5.42 1.05 0.58 19.53 22.06 26.86 2.13 0.00 3.35 5 394388 Transcript 0 3.48 0.00 3.40 13.15 0.00 2.61 0.00 2.01 6.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 3.13 0.00 0.00 0.00 6 ER1a ExonRegion 0 0.00 0.03 0.02 0.02 0.00 0.00 0.09 0.00 0.02 0.00 0.00 0.00 0.00 0.05 1.68 0.00 0.00 0.00 0.00 0.10 0.00 0.00 0.00 7 E1_Da NovelBoundary 0 3.33 15.52 4.55 5.03 0.00 9.31 4.24 23.17 37.99 11.93 48.96 0.00 0.00 37.97 8.90 7.43 69.38 18.28 20.89 131.35 11.12 15.00 3.59 8 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 0.00 1.36 0.00 0.00 1.56 0.00 0.00 1.58 0.00 0.00 0.00 0.18 0.00 0.00 5.80 0.00 0.69 0.85 0.00 2.39 1.01 0.00 5.87 10 Ix Intron 0 8.59 4.71 11.64 8.24 7.75 27.63 9.97 4.48 6.40 1.98 1.12 0.00 0.00 1.55 7.81 5.17 3.83 26.62 60.92 17.26 0.00 0.00 0.00 11 Ix_AR1 ActiveIntronRegion 0 10.78 6.25 12.20 8.76 9.81 35.09 12.74 4.77 6.61 2.02 1.49 0.00 0.00 2.07 10.42 6.84 5.05 28.58 76.21 22.31 0.00 0.00 0.00 12 E3_Aa NovelBoundary 0 5.63 0.00 7.84 2.06 0.00 4.54 0.00 2.51 6.97 1.10 0.00 0.00 0.00 0.00 0.00 4.02 0.00 10.07 17.88 5.75 0.00 0.00 0.00 13 Ix_AR2 ActiveIntronRegion 0 2.12 0.00 11.32 7.46 1.73 5.29 1.71 3.97 6.61 2.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.48 15.74 2.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 3.66 3.47 15.68 6.31 8.59 14.73 9.12 6.55 6.75 4.40 3.06 2.02 0.73 2.83 6.38 2.09 1.16 25.70 32.63 25.98 4.26 0.00 2.35 15 E3a_E4a KnownJunction 0 0.00 10.79 11.65 3.16 4.16 17.66 18.59 4.60 8.19 9.24 0.00 0.00 0.00 2.47 4.45 0.00 0.00 13.35 11.48 27.74 0.00 0.00 4.35 16 E4_Aa NovelBoundary 0 0.00 2.57 6.68 7.56 4.07 2.90 2.25 1.81 7.55 2.95 0.00 0.00 0.00 2.47 4.45 0.00 0.00 15.55 3.58 8.12 0.00 0.00 0.00 17 ER4a ExonRegion 0 6.99 10.99 20.75 14.11 8.22 15.69 6.57 13.33 18.12 9.81 3.34 6.63 1.32 10.63 13.57 2.18 7.67 17.61 13.27 50.15 4.82 0.00 2.70 18 E4_Da KnownBoundary 0 9.78 9.27 25.69 16.85 15.53 0.00 4.37 15.94 9.69 13.08 4.63 0.00 0.00 7.83 35.48 0.00 7.85 17.99 9.04 46.72 2.90 0.00 0.00 19 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4b ExonRegion 0 13.47 13.54 30.87 11.57 7.96 4.92 5.65 12.06 11.27 12.45 3.68 4.96 6.41 10.50 25.33 6.16 10.06 23.30 33.64 40.74 8.71 1.42 2.01 21 E4_Db KnownBoundary 0 24.23 10.79 34.53 3.33 3.57 16.13 10.60 8.05 13.66 10.31 7.21 12.60 13.31 14.95 9.64 13.07 9.16 22.38 73.51 49.34 16.80 3.12 4.35 22 ER4c ExonRegion 0 7.13 15.89 16.17 11.26 13.28 9.20 10.33 6.05 10.42 5.68 6.37 8.99 8.30 8.50 17.61 3.61 5.66 15.12 32.12 25.88 12.13 0.85 3.66 23 E4_Dc NovelBoundary 0 0.00 3.35 2.96 0.00 0.00 0.00 1.72 0.00 1.48 0.00 0.00 6.30 0.00 9.42 0.00 4.27 0.00 0.00 0.00 2.43 7.60 0.00 0.00 24 E5_Aa NovelBoundary 0 0.00 5.39 7.16 11.79 0.00 0.00 15.50 17.91 7.09 4.92 0.00 0.00 0.00 0.00 0.00 4.27 4.49 3.77 13.27 11.57 0.00 2.45 0.00 25 ER5a ExonRegion 0 2.10 5.47 0.60 0.81 1.77 4.83 1.32 0.85 4.39 0.57 0.64 1.18 0.00 1.27 2.83 0.98 1.09 5.04 5.23 8.51 2.19 0.00 1.95 26 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 0.00 27 E6_Aa NovelBoundary 0 3.78 11.64 13.90 11.39 8.15 5.79 4.15 4.64 12.99 7.33 0.00 0.00 0.00 0.00 0.00 3.93 0.00 10.11 0.00 8.18 0.00 0.00 0.00 28 ER6a ExonRegion 0 1.77 5.83 1.95 6.35 13.20 11.09 0.00 2.38 5.10 3.55 0.16 3.48 0.00 0.16 0.19 0.00 0.00 5.15 4.54 23.09 1.19 0.00 0.00 29 E6_Ab KnownBoundary 0 0.00 15.92 2.96 14.32 20.29 13.80 0.00 6.04 12.18 8.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.83 12.80 43.46 2.90 0.00 0.00 30 ER6b ExonRegion 0 1.62 4.81 3.86 7.06 1.39 3.10 1.47 4.62 4.20 2.15 0.84 1.02 0.00 0.26 0.61 0.00 0.01 6.01 2.86 11.22 0.67 0.00 0.00 31 E6_Da KnownBoundary 0 0.00 0.00 2.81 10.29 0.00 2.73 1.63 1.93 5.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 4.52 2.75 0.00 0.00 0.00 32 E6a_E6c KnownJunction 0 3.48 0.00 3.40 13.15 0.00 2.61 0.00 2.01 6.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 3.13 0.00 0.00 0.00 33 E6_Ac KnownBoundary 0 10.30 3.22 0.00 2.00 3.57 0.00 0.00 2.09 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.06 0.00 5.88 0.00 0.00 0.00 34 ER6c ExonRegion 0 4.23 2.03 2.45 12.27 2.68 1.83 1.32 5.19 6.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.30 7.39 3.19 6.38 0.00 0.00 0.00 35 ER6d ExonRegion 0 1.26 7.33 7.46 5.30 0.71 9.70 0.99 4.21 5.59 0.82 0.00 1.51 2.70 1.97 0.00 0.00 2.22 9.18 2.68 9.44 0.00 0.33 1.29 36 E6_Db KnownBoundary 0 2.96 8.29 10.94 18.95 0.00 9.88 6.45 9.04 10.07 4.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.95 0.00 18.60 2.35 3.12 7.60 37 ER6e ExonRegion 0 2.19 8.31 6.98 9.30 6.28 6.77 3.15 5.11 7.80 4.94 0.58 2.93 2.16 0.95 0.94 0.66 1.23 6.82 5.68 11.56 1.23 0.43 0.96 38 IG28_AR1 ActiveIntergenicRegion 0 1.32 3.77 4.25 1.87 6.85 3.21 3.94 7.56 7.60 3.20 7.20 28.35 28.80 24.95 18.60 17.76 17.59 4.70 4.44 4.21 6.24 2.69 3.42