Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MMRN2 Gene 0 53.38 7.74 89.49 57.76 55.04 23.76 15.52 51.89 79.76 27.30 1.36 1.66 0.74 1.80 1.59 0.84 1.53 2.30 1.76 0.74 11.46 20.78 7.56 2 474994 Transcript 0 2.21 0.24 15.76 1.41 3.88 11.68 3.68 10.60 20.79 6.24 3.36 3.50 0.22 6.32 4.19 3.10 5.93 4.84 2.95 0.00 10.09 3.50 4.94 3 443699 Transcript 0 0.43 0.00 0.20 0.04 1.27 1.00 0.01 0.06 0.24 0.10 0.54 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.46 0.42 0.67 4 372027 Transcript 0 19.36 3.63 89.50 43.36 29.62 19.02 6.46 37.88 68.61 26.06 0.26 0.00 0.00 0.06 0.29 0.23 0.33 0.83 0.60 0.17 8.13 16.28 3.11 5 488950 Transcript 0 1.12 0.00 0.03 0.02 0.00 0.00 0.38 1.33 2.48 0.00 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.57 2.35 1.66 0.00 6 ER1a ExonRegion 0 4.42 0.47 31.52 2.82 7.75 23.35 7.36 21.20 41.59 12.48 6.72 7.00 0.45 12.64 8.39 6.20 11.86 9.68 5.91 0.00 20.17 6.99 9.87 7 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 Ix Intron 0 6.02 0.32 38.13 1.04 13.20 20.99 10.03 22.06 32.85 10.40 7.78 7.08 5.39 12.03 11.97 3.99 10.95 9.86 9.56 0.00 11.65 6.00 7.42 9 Ix_AR2 ActiveIntronRegion 0 4.25 0.41 34.46 1.23 13.97 20.61 9.92 22.59 35.00 10.54 6.99 6.00 6.30 13.06 11.34 4.77 10.60 11.55 10.02 0.00 10.32 4.88 7.08 10 Ix_AR1 ActiveIntronRegion 0 8.59 0.20 43.55 0.78 12.15 21.61 10.21 21.40 29.87 10.24 8.96 8.66 4.10 10.58 12.92 2.87 11.47 7.46 8.92 0.00 13.61 7.65 7.94 11 ER2a ExonRegion 0 1.29 0.00 0.59 0.13 3.82 2.99 0.02 0.19 0.71 0.30 1.61 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 1.39 1.27 2.01 12 E2_Ab KnownBoundary 0 3.70 0.00 1.24 0.00 11.29 11.98 0.00 1.97 5.35 1.18 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.09 3.12 6.91 13 ER2b ExonRegion 0 16.41 0.63 23.23 15.77 22.86 8.46 6.27 13.77 32.12 11.25 0.46 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 1.12 14.69 10.37 14 E2a_E3a KnownJunction 0 3.48 3.35 41.51 50.38 7.05 0.00 0.00 30.48 50.29 12.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.37 15.62 15 I2_AR3 ActiveIntronRegion 0 22.83 0.00 10.94 4.53 13.47 4.29 2.74 7.10 11.31 4.89 0.00 0.00 0.00 0.00 1.04 0.00 0.00 0.00 1.54 0.00 1.50 0.00 1.52 16 E3_Aa NovelBoundary 0 16.37 0.00 3.70 4.66 4.07 4.88 2.25 1.68 9.43 2.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 7.97 0.00 0.00 17 ER3a ExonRegion 0 13.44 5.28 55.50 31.17 37.11 24.66 9.49 39.92 61.61 13.32 0.00 0.00 0.00 0.19 0.00 0.00 0.00 0.00 0.00 0.00 8.76 23.73 9.56 18 E3a_E4a KnownJunction 0 29.78 0.00 72.23 33.50 39.56 19.31 7.64 28.09 61.60 23.45 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 17.98 10.53 4.27 19 ER4a ExonRegion 0 23.36 0.97 54.04 42.81 36.76 20.27 11.88 48.27 73.52 24.96 0.00 0.00 0.00 0.41 0.00 0.00 1.57 0.00 0.00 0.00 14.54 15.29 1.62 20 E4a_E5a KnownJunction 0 37.71 0.00 71.88 48.31 34.04 20.44 10.82 56.31 82.06 26.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.02 17.21 7.60 21 E4a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER5a ExonRegion 0 33.13 7.00 64.70 53.66 42.45 13.67 12.50 43.62 89.43 31.72 0.00 0.00 0.00 0.62 0.00 0.00 0.00 0.00 2.01 0.00 11.59 20.04 7.40 23 E5a_E7a KnownJunction 0 42.97 9.47 66.20 60.76 39.90 23.57 11.79 64.61 86.54 28.07 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 5.56 30.62 4.35 24 ER6a ExonRegion 0 2.25 0.00 0.05 0.04 0.00 0.00 0.76 2.66 4.95 0.00 1.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 4.71 3.32 0.00 25 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER7a ExonRegion 0 28.54 8.98 81.56 71.59 41.70 30.28 13.04 63.11 110.66 36.65 0.00 0.00 0.00 0.79 0.00 0.00 0.00 0.00 3.72 0.00 16.37 33.16 12.48 27 E7_Da KnownBoundary 0 45.71 6.05 116.73 82.37 50.17 25.55 15.99 73.19 149.59 31.70 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 12.33 0.00 21.56 38.39 6.66 28 ER7b ExonRegion 0 21.48 6.50 100.77 58.22 38.69 17.60 7.00 49.53 104.59 34.33 0.00 0.00 0.00 0.29 0.00 0.00 1.65 0.00 2.15 0.00 13.14 23.53 6.56 29 E7b_E8a KnownJunction 0 30.75 8.22 143.87 82.11 55.60 29.93 7.55 65.43 82.46 34.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.55 31.35 0.00 30 ER8a ExonRegion 0 25.12 5.94 102.33 65.23 43.27 22.87 11.77 57.18 106.40 30.93 0.38 0.00 0.00 0.53 1.38 0.59 0.00 0.92 0.20 0.84 12.56 21.91 5.90 31 E8_Da KnownBoundary 0 54.08 9.21 113.77 75.32 51.87 35.43 15.68 56.68 109.40 24.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.42 0.00 8.28 17.27 0.00 32 ER8b ExonRegion 0 28.53 3.26 105.79 50.53 36.52 29.63 9.80 44.56 88.47 31.25 0.24 0.00 0.00 0.00 1.46 1.16 0.00 1.78 0.85 0.83 7.69 14.44 7.17 33 E8b_E8c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER8c ExonRegion 0 20.78 0.00 105.55 28.62 18.61 24.84 8.43 32.05 69.45 31.12 1.93 0.00 0.00 0.00 2.77 0.00 0.00 3.70 0.00 0.00 6.91 12.22 2.94 35 E8_Ac KnownBoundary 0 30.82 0.00 106.35 36.49 21.22 20.05 10.38 33.76 72.60 34.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.65 14.02 0.00 36 ER8d ExonRegion 0 15.34 0.17 97.06 25.95 17.28 17.96 7.94 28.16 67.11 30.30 1.05 0.00 0.00 0.00 0.00 0.00 0.00 2.39 0.00 0.00 8.26 12.07 0.86 37 ER8e ExonRegion 0 19.99 3.47 65.32 32.27 15.62 11.62 7.38 31.00 55.30 21.20 0.64 0.53 0.14 0.22 0.56 0.11 0.00 1.19 1.42 0.32 10.23 13.13 4.72 38 E8c_E9a KnownJunction 0 64.16 5.53 100.62 63.63 52.89 20.10 16.25 70.03 79.83 31.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.21 19.35 16.73 39 ER9a ExonRegion 0 123.73 16.90 147.48 110.08 122.01 39.42 30.56 90.82 119.83 40.93 1.31 2.54 1.95 1.43 1.55 0.48 1.06 2.75 1.85 1.65 12.35 33.95 10.18 40 ER9b ExonRegion 0 0.71 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.98 41 IG12 Intergenic 0 10.29 23.11 13.88 15.67 22.87 29.29 29.66 16.91 14.71 9.04 8.26 23.72 23.21 10.09 14.95 4.60 5.40 6.93 7.48 8.71 7.24 26.52 13.90 42 IG12_AR3 ActiveIntergenicRegion 0 6.56 9.81 8.29 13.06 12.06 16.07 14.45 16.74 5.05 8.06 4.50 7.55 6.54 9.06 7.11 6.79 8.71 8.96 7.31 6.30 7.91 7.19 9.45 43 IG12_AR2 ActiveIntergenicRegion 0 32.38 70.44 43.05 37.40 56.43 72.57 70.34 43.58 38.67 24.88 21.78 57.57 55.42 21.34 44.69 8.61 12.03 15.74 16.79 19.52 16.09 72.50 34.14 44 IG12_SR1 SilentIntergenicRegion 0 7.17 25.43 13.66 28.26 54.13 75.79 69.88 22.45 24.53 12.92 12.65 48.45 37.11 20.74 12.02 8.82 8.42 10.10 14.33 13.96 8.53 49.89 31.81 45 IG12_AR1 ActiveIntergenicRegion 0 6.86 47.03 17.15 22.04 38.33 37.06 57.31 18.85 31.57 10.82 10.37 82.83 81.05 23.25 16.02 3.94 4.56 5.11 11.99 24.34 4.13 72.55 9.01